Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_B14
(263 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 97 2e-21
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 97 2e-21
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 88 9e-19
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 88 9e-19
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 87 1e-18
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 77 1e-15
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 73 2e-14
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 73 2e-14
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 51 1e-07
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 51 1e-07
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 50 2e-07
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 50 2e-07
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 38 0.001
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 34 0.016
Z81586-10|CAD56598.1| 349|Caenorhabditis elegans Hypothetical p... 28 0.79
U41508-6|ABS19459.1| 323|Caenorhabditis elegans Hypothetical pr... 27 2.4
U41508-5|AAG00025.2| 511|Caenorhabditis elegans Hypothetical pr... 27 2.4
AF326938-1|AAG49388.1| 511|Caenorhabditis elegans XG314 protein. 27 2.4
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 26 4.2
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 26 4.2
AL032626-3|CAA21540.1| 306|Caenorhabditis elegans Hypothetical ... 26 4.2
U23449-3|AAC24301.1| 579|Caenorhabditis elegans Nuclear hormone... 25 7.4
AF273773-1|AAG15122.1| 555|Caenorhabditis elegans nuclear recep... 25 7.4
AF039044-11|AAG24131.1| 333|Caenorhabditis elegans Serpentine r... 25 7.4
Z92825-2|CAB07315.1| 266|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z81553-8|CAB04497.1| 408|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z70684-6|CAA94595.1| 230|Caenorhabditis elegans Hypothetical pr... 25 9.8
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 97.1 bits (231), Expect = 2e-21
Identities = 46/52 (88%), Positives = 47/52 (90%)
Frame = +1
Query: 106 MAKAPADGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFTDTERLIG 261
M+K A GIDLGTTYSCVGVF HGKVEIIANDQGNRTT SYVAFTDTERLIG
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIG 52
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 97.1 bits (231), Expect = 2e-21
Identities = 46/52 (88%), Positives = 47/52 (90%)
Frame = +1
Query: 106 MAKAPADGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFTDTERLIG 261
M+K A GIDLGTTYSCVGVF HGKVEIIANDQGNRTT SYVAFTDTERLIG
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIG 52
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 87.8 bits (208), Expect = 9e-19
Identities = 38/52 (73%), Positives = 46/52 (88%)
Frame = +1
Query: 106 MAKAPADGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFTDTERLIG 261
M+ A GIDLGTTYSCVG++Q+GKVEI+AN +GN+TT SYVAFTDTERL+G
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVG 52
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 87.8 bits (208), Expect = 9e-19
Identities = 38/52 (73%), Positives = 46/52 (88%)
Frame = +1
Query: 106 MAKAPADGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFTDTERLIG 261
M+ A GIDLGTTYSCVG++Q+GKVEI+AN +GN+TT SYVAFTDTERL+G
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVG 52
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 87.4 bits (207), Expect = 1e-18
Identities = 38/52 (73%), Positives = 46/52 (88%)
Frame = +1
Query: 106 MAKAPADGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFTDTERLIG 261
M+ A GIDLGTTYSCVG++Q+GKVEI+AN +GN+TT SYVAFTDTERL+G
Sbjct: 1 MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVG 52
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 77.4 bits (182), Expect = 1e-15
Identities = 45/76 (59%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Frame = +1
Query: 40 LLAEFVLRAVND*LSIRYKRNKMAKAPADGIDLGTTYSCVGVFQHGKVEIIANDQGNRTT 219
+L FV A D + K KM GIDLGTTYSCVGVF++G+VEIIANDQGNR T
Sbjct: 7 ILIAFVANAYCDEGASTEKEEKMGTII--GIDLGTTYSCVGVFKNGRVEIIANDQGNRIT 64
Query: 220 HSYVAFT--DTERLIG 261
SYVAF+ ERLIG
Sbjct: 65 PSYVAFSGDQGERLIG 80
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 73.3 bits (172), Expect = 2e-14
Identities = 35/47 (74%), Positives = 41/47 (87%), Gaps = 2/47 (4%)
Frame = +1
Query: 127 GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFT--DTERLIG 261
GIDLGTTYSCVGV+++G+VEIIANDQGNR T SYVAF+ +RLIG
Sbjct: 37 GIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIG 83
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 73.3 bits (172), Expect = 2e-14
Identities = 35/47 (74%), Positives = 41/47 (87%), Gaps = 2/47 (4%)
Frame = +1
Query: 127 GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFT--DTERLIG 261
GIDLGTTYSCVGV+++G+VEIIANDQGNR T SYVAF+ +RLIG
Sbjct: 37 GIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIG 83
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 51.2 bits (117), Expect = 1e-07
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = +1
Query: 127 GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAF-TDTERLIG 261
GIDLGTT+SCV +Q+G+V I+ N+ G RTT S +A D + LIG
Sbjct: 4 GIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIG 49
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 51.2 bits (117), Expect = 1e-07
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = +1
Query: 127 GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAF-TDTERLIG 261
GIDLGTT+SCV +Q+G+V I+ N+ G RTT S +A D + LIG
Sbjct: 4 GIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIG 49
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 50.4 bits (115), Expect = 2e-07
Identities = 26/46 (56%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Frame = +1
Query: 127 GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFT-DTERLIG 261
GIDLGTT SCV + + ++I N +G RTT S VAFT D ERL+G
Sbjct: 35 GIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVG 80
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 50.4 bits (115), Expect = 2e-07
Identities = 26/46 (56%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Frame = +1
Query: 127 GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFT-DTERLIG 261
GIDLGTT SCV + + ++I N +G RTT S VAFT D ERL+G
Sbjct: 35 GIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVG 80
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 37.9 bits (84), Expect = 0.001
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = +1
Query: 127 GIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTHSYVAF 237
GIDLGTTYS +G++ G+ I+ +D G ++ S VAF
Sbjct: 37 GIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAF 75
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 33.9 bits (74), Expect = 0.016
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 127 GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFTDTERLIG 261
G D+G +GV + G +E+I ND T + V+F +R +G
Sbjct: 5 GFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMG 49
>Z81586-10|CAD56598.1| 349|Caenorhabditis elegans Hypothetical
protein T05F1.13 protein.
Length = 349
Score = 28.3 bits (60), Expect = 0.79
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -1
Query: 134 SIPSAGALAILFLLYLIDNQSLTARRTNSASKGA 33
SIPS GA+ L YL+ N +L N A +G+
Sbjct: 178 SIPSGGAITSDLLEYLLQNPNLFCLNINCAVRGS 211
>U41508-6|ABS19459.1| 323|Caenorhabditis elegans Hypothetical
protein W01C8.5b protein.
Length = 323
Score = 26.6 bits (56), Expect = 2.4
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +1
Query: 94 KRNKMAKAPADGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYV 231
K+N K A G+ G+ FQ G VE I N GN + YV
Sbjct: 92 KKNTDGKPMARGVLKGSAERTNFTFQLGDVEHIKNLNGNLRSPKYV 137
>U41508-5|AAG00025.2| 511|Caenorhabditis elegans Hypothetical
protein W01C8.5a protein.
Length = 511
Score = 26.6 bits (56), Expect = 2.4
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +1
Query: 94 KRNKMAKAPADGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYV 231
K+N K A G+ G+ FQ G VE I N GN + YV
Sbjct: 280 KKNTDGKPMARGVLKGSAERTNFTFQLGDVEHIKNLNGNLRSPKYV 325
>AF326938-1|AAG49388.1| 511|Caenorhabditis elegans XG314 protein.
Length = 511
Score = 26.6 bits (56), Expect = 2.4
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +1
Query: 94 KRNKMAKAPADGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYV 231
K+N K A G+ G+ FQ G VE I N GN + YV
Sbjct: 280 KKNTDGKPMARGVLKGSAERTNFTFQLGDVEHIKNLNGNLRSPKYV 325
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 25.8 bits (54), Expect = 4.2
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 7 LEFGTRVNRAP-LLAEFVLRAVND*LSIRYKRNKMAKAPADGIDLGTTYSCVGV 165
L FG + ++++F ++ V+ N + AP G DLG+T+S + V
Sbjct: 217 LSFGWEEQKMKRIISDFKIQNVSSSALYYTNGNITSSAPITGFDLGSTWSMLAV 270
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 25.8 bits (54), Expect = 4.2
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 7 LEFGTRVNRAP-LLAEFVLRAVND*LSIRYKRNKMAKAPADGIDLGTTYSCVGV 165
L FG + ++++F ++ V+ N + AP G DLG+T+S + V
Sbjct: 217 LSFGWEEQKMKRIISDFKIQNVSSSALYYTNGNITSSAPITGFDLGSTWSMLAV 270
>AL032626-3|CAA21540.1| 306|Caenorhabditis elegans Hypothetical
protein Y37D8A.3 protein.
Length = 306
Score = 25.8 bits (54), Expect = 4.2
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 178 SHAGTHPHKSRLCPDRYH 125
S+AGTHPH S + +H
Sbjct: 68 SNAGTHPHGSTFTKNNFH 85
>U23449-3|AAC24301.1| 579|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 22 protein.
Length = 579
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -1
Query: 254 RRSVSVNATYECV 216
RRSVS++ TYEC+
Sbjct: 122 RRSVSMSMTYECI 134
>AF273773-1|AAG15122.1| 555|Caenorhabditis elegans nuclear receptor
NHR-22 protein.
Length = 555
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -1
Query: 254 RRSVSVNATYECV 216
RRSVS++ TYEC+
Sbjct: 98 RRSVSMSMTYECI 110
>AF039044-11|AAG24131.1| 333|Caenorhabditis elegans Serpentine
receptor, class j protein37 protein.
Length = 333
Score = 25.0 bits (52), Expect = 7.4
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = -2
Query: 157 HKSRLCPDRYHLLVLWPFCFFCILLII 77
H S L D++H + F FC+ ++
Sbjct: 119 HNSELTNDKFHTYMTISFGIFCVYFVV 145
>Z92825-2|CAB07315.1| 266|Caenorhabditis elegans Hypothetical
protein C13C4.4 protein.
Length = 266
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/31 (32%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 121 ADGIDLGTTYSCVG-VFQHGKVEIIANDQGN 210
+DG+ + + V ++QH KV+ ++N +GN
Sbjct: 25 SDGVAVPKSAEAVNFLYQHSKVKFLSNAKGN 55
>Z81553-8|CAB04497.1| 408|Caenorhabditis elegans Hypothetical
protein F56H6.8 protein.
Length = 408
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 248 SVSVNATYECVVLLPWSLAMISTF 177
S SVN TY+ L P+ +A+ TF
Sbjct: 321 SGSVNCTYQLATLGPYKIALKFTF 344
>Z70684-6|CAA94595.1| 230|Caenorhabditis elegans Hypothetical
protein F28D1.6 protein.
Length = 230
Score = 24.6 bits (51), Expect = 9.8
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 136 DRYHLLVLWPFCFFCILL 83
DR +L +P CFF ++L
Sbjct: 207 DRLFVLAAFPICFFAVML 224
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,966,338
Number of Sequences: 27780
Number of extensions: 109482
Number of successful extensions: 352
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 352
length of database: 12,740,198
effective HSP length: 66
effective length of database: 10,906,718
effective search space used: 229041078
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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