Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_B14
(263 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 24 0.36
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 24 0.36
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 0.64
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 0.64
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 1.5
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 22 1.5
AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor prot... 22 1.5
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 21 2.6
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 3.4
AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein. 21 3.4
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 21 3.4
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 21 3.4
M12598-1|AAA27733.1| 77|Apis mellifera protein ( Bee preprosec... 20 4.5
AY082691-1|AAL92482.1| 77|Apis mellifera preprosecapin protein. 20 5.9
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 20 5.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 20 5.9
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 19 7.8
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 19 7.8
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 23.8 bits (49), Expect = 0.36
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +2
Query: 92 TKETKWPKHQQMVSIWAQPTLVWVCSS 172
T+ K+ KH+ +W LVW S+
Sbjct: 289 TQPIKYAKHKNNRRVWLTILLVWAISA 315
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 23.8 bits (49), Expect = 0.36
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -2
Query: 124 LLVLWPFCFFCI 89
LL++W C+FCI
Sbjct: 180 LLLVWILCYFCI 191
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 23.0 bits (47), Expect = 0.64
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -2
Query: 124 LLVLWPFCFFCI 89
L V+W C+FCI
Sbjct: 213 LAVVWIMCYFCI 224
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.0 bits (47), Expect = 0.64
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -2
Query: 124 LLVLWPFCFFCI 89
L V+W C+FCI
Sbjct: 266 LAVVWIMCYFCI 277
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.8 bits (44), Expect = 1.5
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = -3
Query: 228 VRVRSSVALVIGDDLNFPMLEHT 160
+ V+ + +IG D + PM+ H+
Sbjct: 469 LNVQRAAKCIIGKDYSLPMVNHS 491
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.8 bits (44), Expect = 1.5
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -1
Query: 254 RRSVSVNATYEC 219
RRS++ NA Y+C
Sbjct: 212 RRSITKNAVYQC 223
>AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor
protein.
Length = 72
Score = 21.8 bits (44), Expect = 1.5
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -1
Query: 254 RRSVSVNATYEC 219
RRS++ NA Y+C
Sbjct: 9 RRSITKNAVYQC 20
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 21.0 bits (42), Expect = 2.6
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 10 EFGTRVNRAPLLAEFVLRAVN 72
++GT+ +APLL F R ++
Sbjct: 24 KWGTQFGQAPLLERFFWRTLD 44
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 20.6 bits (41), Expect = 3.4
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 104 KWPKHQQMVSIWA 142
K K QQM+ IWA
Sbjct: 28 KLSKKQQMLGIWA 40
>AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein.
Length = 104
Score = 20.6 bits (41), Expect = 3.4
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -3
Query: 189 DLNFPMLEHTHTRVGCAQIDTICW 118
D N P+L H RV C D + W
Sbjct: 49 DSNEPLLPLRHRRVTC---DVLSW 69
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 20.6 bits (41), Expect = 3.4
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -3
Query: 252 TLSVGERNVRVRSSVALVIGDDLNFPMLEHTHT 154
TLSV + V S + IGD+ F ++ + ++
Sbjct: 185 TLSVQLLSCEVNGSTLVYIGDNEGFALIIYNNS 217
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 20.6 bits (41), Expect = 3.4
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = -2
Query: 175 HAGTHPHKSRLC 140
H G PHK +C
Sbjct: 170 HTGERPHKCTVC 181
Score = 19.4 bits (38), Expect = 7.8
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 10 EFGTRVNRAPLL 45
E+G RV R P+L
Sbjct: 424 EYGIRVERDPIL 435
>M12598-1|AAA27733.1| 77|Apis mellifera protein ( Bee
preprosecapin mRNA, complete cds. ).
Length = 77
Score = 20.2 bits (40), Expect = 4.5
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -2
Query: 127 HLLVLWPFCFFCILLII-SR*QLVGRTQQ 44
HL+ + F F ILLII S+ + V +Q
Sbjct: 10 HLITVLLFSFVVILLIIPSKCEAVSNDRQ 38
>AY082691-1|AAL92482.1| 77|Apis mellifera preprosecapin protein.
Length = 77
Score = 19.8 bits (39), Expect = 5.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 127 HLLVLWPFCFFCILLII 77
HL+ + F F ILLII
Sbjct: 10 HLITVLLFSFVVILLII 26
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 19.8 bits (39), Expect = 5.9
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -2
Query: 187 SQLSHAGTHPHKSRLCPDRYH 125
++ S AG HP+ + L YH
Sbjct: 1723 AEASAAGLHPNNTLLHSFMYH 1743
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 19.8 bits (39), Expect = 5.9
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -2
Query: 187 SQLSHAGTHPHKSRLCPDRYH 125
++ S AG HP+ + L YH
Sbjct: 1719 AEASAAGLHPNNTLLHSFMYH 1739
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 19.4 bits (38), Expect = 7.8
Identities = 7/25 (28%), Positives = 10/25 (40%)
Frame = +2
Query: 116 HQQMVSIWAQPTLVWVCSSMGKLRS 190
H + +W Q L W S + S
Sbjct: 83 HVMLKLMWEQSHLTWKSSEFDSINS 107
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 19.4 bits (38), Expect = 7.8
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +3
Query: 147 LLLCGCVPAWES*DHR 194
+LL G P W+ HR
Sbjct: 104 ILLVGYPPFWDEDQHR 119
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,291
Number of Sequences: 438
Number of extensions: 1269
Number of successful extensions: 21
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used: 4887441
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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