Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_B13
(492 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC079799-1|AAS07488.1| 591|Homo sapiens unknown protein. 80 4e-15
AB002329-1|BAA20789.2| 814|Homo sapiens KIAA0331 protein. 80 4e-15
BC042914-1|AAH42914.1| 785|Homo sapiens sema domain, immunoglob... 80 5e-15
AC000063-1|AAB46344.1| 785|Homo sapiens semaphorin IV protein. 80 5e-15
AB209259-1|BAD92496.1| 750|Homo sapiens semaphorin 3F variant p... 80 5e-15
U33920-1|AAC50568.1| 785|Homo sapiens semaphorin protein. 79 8e-15
U38276-1|AAB18276.1| 753|Homo sapiens semaphorin III family hom... 79 1e-14
AK027867-1|BAB55418.1| 418|Homo sapiens protein ( Homo sapiens ... 77 3e-14
AK027501-1|BAB55158.1| 699|Homo sapiens protein ( Homo sapiens ... 77 3e-14
AF279656-1|AAG29378.1| 1030|Homo sapiens semaphorin SEMA6A1 prot... 77 3e-14
AB037789-1|BAA92606.1| 1049|Homo sapiens KIAA1368 protein protein. 77 3e-14
BC030690-1|AAH30690.1| 751|Homo sapiens sema domain, immunoglob... 72 1e-12
AB000220-1|BAA32398.1| 751|Homo sapiens semaphorin E protein. 72 1e-12
BC029590-1|AAH29590.1| 416|Homo sapiens SEMA3D protein protein. 69 7e-12
AY358937-1|AAQ89296.1| 777|Homo sapiens Collapsin-2 protein. 69 7e-12
U60800-1|AAC50810.1| 862|Homo sapiens semaphorin protein. 68 2e-11
L26081-1|AAA65938.1| 771|Homo sapiens semaphorin-III protein. 68 2e-11
BC111416-1|AAI11417.1| 771|Homo sapiens sema domain, immunoglob... 68 2e-11
BC054500-1|AAH54500.1| 862|Homo sapiens sema domain, immunoglob... 68 2e-11
AL929575-4|CAI43250.2| 862|Homo sapiens sema domain, immunoglob... 68 2e-11
AL590233-3|CAI17379.2| 862|Homo sapiens sema domain, immunoglob... 68 2e-11
AB210030-1|BAE06112.1| 870|Homo sapiens SEMA4D variant protein ... 68 2e-11
AC073221-1|AAP22350.1| 301|Homo sapiens unknown protein. 67 3e-11
U73167-5|AAC02731.1| 750|Homo sapiens semaphorin V protein. 66 5e-11
U28369-1|AAD09138.1| 749|Homo sapiens semaphorin V protein. 66 5e-11
BC044602-1|AAH44602.1| 573|Homo sapiens SEMA3B protein protein. 66 5e-11
BC024220-1|AAH24220.1| 748|Homo sapiens sema domain, immunoglob... 66 5e-11
BC013975-1|AAH13975.1| 748|Homo sapiens sema domain, immunoglob... 66 5e-11
BC009113-1|AAH09113.1| 635|Homo sapiens SEMA3B protein protein. 66 5e-11
AB209322-1|BAD92559.1| 498|Homo sapiens semaphorin 3B isoform 2... 66 5e-11
AB083186-1|BAB88870.1| 754|Homo sapiens semaphorin 3B protein. 66 5e-11
BC150253-1|AAI50254.1| 1011|Homo sapiens SEMA6D protein protein. 66 6e-11
BC142617-1|AAI42618.1| 888|Homo sapiens sema domain, transmembr... 66 6e-11
AY358939-1|AAQ89298.1| 888|Homo sapiens semaphorin Z protein. 66 6e-11
AF389430-1|AAM69453.1| 1011|Homo sapiens semaphorin 6D isoform 1... 66 6e-11
AF389429-1|AAM69452.1| 1073|Homo sapiens semaphorin 6D isoform 4... 66 6e-11
AF389428-1|AAM69451.1| 1017|Homo sapiens semaphorin 6D isoform 3... 66 6e-11
AF389427-1|AAM69450.1| 998|Homo sapiens semaphorin 6D isoform 2... 66 6e-11
AF293363-1|AAK16831.1| 687|Homo sapiens semaphorin 6B isoform 2... 66 6e-11
AF216389-1|AAF87661.1| 517|Homo sapiens semaphorin 6B isoform 1... 66 6e-11
AB040912-1|BAA96003.2| 1022|Homo sapiens KIAA1479 protein protein. 66 6e-11
AB022433-1|BAB20669.1| 888|Homo sapiens semaphorin Z protein. 66 6e-11
BC109104-1|AAI09105.1| 833|Homo sapiens sema domain, immunoglob... 65 1e-10
BC109103-1|AAI09104.1| 833|Homo sapiens sema domain, immunoglob... 65 1e-10
BC062984-1|AAH62984.1| 543|Homo sapiens SEMA4C protein protein. 65 1e-10
BC038411-1|AAH38411.1| 770|Homo sapiens sema domain, immunoglob... 65 1e-10
BC018361-1|AAH18361.1| 615|Homo sapiens SEMA4F protein protein. 65 1e-10
BC017476-1|AAH17476.2| 645|Homo sapiens SEMA4C protein protein. 65 1e-10
AY358842-1|AAQ89201.1| 833|Homo sapiens SEMA4C protein. 65 1e-10
AL592424-4|CAI16377.1| 962|Homo sapiens sema domain, transmembr... 65 1e-10
AL592424-3|CAI16378.1| 930|Homo sapiens sema domain, transmembr... 65 1e-10
AL592424-2|CAI16376.1| 922|Homo sapiens sema domain, transmembr... 65 1e-10
AK075384-1|BAC11584.1| 770|Homo sapiens protein ( Homo sapiens ... 65 1e-10
AK021660-1|BAB13869.1| 367|Homo sapiens protein ( Homo sapiens ... 65 1e-10
AF389426-1|AAM69449.1| 476|Homo sapiens semaphorin 6D short iso... 65 1e-10
AF053369-1|AAF80660.1| 424|Homo sapiens semaphorin M protein. 65 1e-10
AC092636-5|AAY14967.1| 510|Homo sapiens unknown protein. 65 1e-10
AB058772-1|BAB47498.1| 935|Homo sapiens KIAA1869 protein protein. 65 1e-10
AB051526-1|BAB21830.1| 963|Homo sapiens KIAA1739 protein protein. 65 1e-10
AB022434-1|BAB20670.1| 930|Homo sapiens semaphorin Y protein. 65 1e-10
AB022317-1|BAA75631.1| 615|Homo sapiens semaphorin W protein. 65 1e-10
AF339154-1|AAL72100.1| 962|Homo sapiens semaphorin Y protein. 64 3e-10
AF339153-1|AAL72099.1| 922|Homo sapiens semaphorin Y short isof... 64 3e-10
AF339152-1|AAL72098.1| 930|Homo sapiens semaphorin Y short isof... 64 3e-10
AK000376-1|BAA91124.1| 510|Homo sapiens protein ( Homo sapiens ... 62 1e-09
BC099724-1|AAH99724.1| 782|Homo sapiens sema domain, immunoglob... 60 5e-09
BC098137-1|AAH98137.1| 782|Homo sapiens sema domain, immunoglob... 60 5e-09
BC098104-1|AAH98104.1| 782|Homo sapiens semaphorin sem2 protein. 60 5e-09
AK024425-1|BAB15715.1| 725|Homo sapiens FLJ00014 protein protein. 60 5e-09
AB029496-1|BAA98132.1| 782|Homo sapiens semaphorin sem2 protein. 60 5e-09
BC128579-1|AAI28580.1| 702|Homo sapiens SEMA4G protein protein. 58 1e-08
BC110382-1|AAI10383.1| 843|Homo sapiens sema domain, immunoglob... 58 1e-08
BC051030-1|AAH51030.1| 838|Homo sapiens SEMA4G protein protein. 58 1e-08
AL133215-2|CAI10916.1| 843|Homo sapiens sema domain, immunoglob... 58 1e-08
AL133215-1|CAB92805.1| 838|Homo sapiens sema domain, immunoglob... 58 1e-08
AB046839-1|BAB13445.1| 869|Homo sapiens KIAA1619 protein protein. 58 1e-08
BX537671-1|CAD97806.1| 681|Homo sapiens hypothetical protein pr... 56 9e-08
BC126438-1|AAI26439.1| 837|Homo sapiens sema domain, immunoglob... 56 9e-08
BC110853-1|AAI10854.1| 837|Homo sapiens sema domain, immunoglob... 56 9e-08
BC094849-1|AAH94849.1| 521|Homo sapiens SEMA4B protein protein. 56 9e-08
BC017658-1|AAH17658.1| 458|Homo sapiens SEMA4B protein protein. 56 9e-08
BC010701-1|AAH10701.2| 530|Homo sapiens SEMA4B protein protein. 56 9e-08
AY445887-1|AAR15707.1| 837|Homo sapiens semaphorin 4b precursor... 56 9e-08
AY358392-1|AAQ88758.1| 837|Homo sapiens semaphorin C protein. 56 9e-08
AL390081-1|CAB98205.1| 673|Homo sapiens SEMA4B, Semaphorin 4B p... 56 9e-08
AK026133-1|BAB15372.1| 380|Homo sapiens protein ( Homo sapiens ... 56 9e-08
AB051532-1|BAB21836.1| 893|Homo sapiens KIAA1745 protein protein. 56 9e-08
AB209278-1|BAD92515.1| 518|Homo sapiens semaphorin 6B isoform 3... 54 4e-07
BC077726-1|AAH77726.1| 1151|Homo sapiens sema domain, seven thro... 49 1e-05
AY358124-1|AAQ88491.1| 1092|Homo sapiens SEMA5B protein. 49 1e-05
AB040878-1|BAA95969.1| 1202|Homo sapiens KIAA1445 protein protein. 49 1e-05
BC020974-1|AAH20974.1| 761|Homo sapiens sema domain, immunoglob... 48 1e-05
AY358531-1|AAQ88895.1| 761|Homo sapiens semaphorin B protein. 48 1e-05
AL135927-14|CAI15533.1| 629|Homo sapiens sema domain, immunoglo... 48 1e-05
AL135927-12|CAI15531.1| 723|Homo sapiens sema domain, immunoglo... 48 1e-05
AL135927-11|CAI15530.1| 761|Homo sapiens sema domain, immunoglo... 48 1e-05
AB029394-1|BAB20087.1| 762|Homo sapiens SEMB protein. 48 1e-05
BC101647-1|AAI01648.1| 666|Homo sapiens semaphorin 7A, GPI memb... 46 9e-05
BC101643-1|AAI01644.1| 666|Homo sapiens semaphorin 7A, GPI memb... 46 9e-05
AY885237-1|AAW62253.1| 666|Homo sapiens sema domain, immunoglob... 46 9e-05
AM180451-1|CAJ55404.1| 666|Homo sapiens semaphorin 7A protein. 46 9e-05
AM180450-1|CAJ55403.1| 666|Homo sapiens semaphorin 7A protein. 46 9e-05
AM180449-1|CAJ55402.1| 666|Homo sapiens semaphorin 7A protein. 46 9e-05
AM180448-1|CAJ55401.1| 666|Homo sapiens semaphorin 7A protein. 46 9e-05
AM180447-1|CAJ55400.1| 666|Homo sapiens semaphorin 7A protein. 46 9e-05
AM180446-1|CAJ55399.1| 666|Homo sapiens semaphorin 7A protein. 46 9e-05
AM180445-1|CAJ55398.1| 666|Homo sapiens semaphorin 7A protein. 46 9e-05
AF071542-1|AAC80456.1| 666|Homo sapiens semaphorin K1 protein. 46 9e-05
AF069493-1|AAC82642.1| 666|Homo sapiens GPI-anchored membrane p... 46 9e-05
AF030698-1|AAC34261.1| 666|Homo sapiens semaphorin L protein. 46 9e-05
AF030697-1|AAC34741.1| 594|Homo sapiens semaphorin L protein. 46 9e-05
AK092182-1|BAC03823.1| 132|Homo sapiens protein ( Homo sapiens ... 42 9e-04
L13689-1|AAA19873.1| 326|Homo sapiens BMI-1 protein. 32 0.94
CR456911-1|CAG33192.1| 326|Homo sapiens COMMD3 protein. 32 0.94
BC011652-1|AAH11652.1| 326|Homo sapiens BMI1 polycomb ring fing... 32 0.94
AL158211-10|CAI15958.1| 326|Homo sapiens BMI1 polycomb ring fin... 32 0.94
AL158211-9|CAI15957.1| 207|Homo sapiens BMI1 polycomb ring fing... 32 0.94
AL158211-8|CAI15956.1| 150|Homo sapiens BMI1 polycomb ring fing... 32 0.94
S62198-1|AAB27059.1| 289|Homo sapiens flvi-2/bmi-1 protein. 30 5.0
BC114623-1|AAI14624.1| 537|Homo sapiens SEMA6C protein protein. 30 5.0
Z97989-3|CAI22298.1| 574|Homo sapiens TRAF3 interacting protein... 29 6.6
Z97989-2|CAI22297.1| 565|Homo sapiens TRAF3 interacting protein... 29 6.6
Z97989-1|CAI22296.1| 564|Homo sapiens TRAF3 interacting protein... 29 6.6
BC114521-1|AAI14522.1| 474|Homo sapiens SEMA6C protein protein. 29 6.6
BC002823-1|AAH02823.1| 565|Homo sapiens TRAF3 interacting prote... 29 6.6
AL008730-3|CAA15506.1| 574|Homo sapiens TRAF3 interacting prote... 29 6.6
AL008730-2|CAD92597.1| 565|Homo sapiens TRAF3 interacting prote... 29 6.6
AL008730-1|CAD92598.1| 564|Homo sapiens TRAF3 interacting prote... 29 6.6
AK025351-1|BAB15117.1| 564|Homo sapiens protein ( Homo sapiens ... 29 6.6
AF274303-1|AAG15367.1| 574|Homo sapiens NFkB-activating protein... 29 6.6
AF272151-1|AAG15407.1| 574|Homo sapiens adaptor protein CIKS pr... 29 6.6
AF136407-1|AAF67447.1| 565|Homo sapiens unknown protein. 29 6.6
AF136406-1|AAF67446.1| 565|Homo sapiens unknown protein. 29 6.6
AF136405-1|AAF67445.1| 574|Homo sapiens unknown protein. 29 6.6
AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3 prot... 29 8.8
AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein. 29 8.8
>AC079799-1|AAS07488.1| 591|Homo sapiens unknown protein.
Length = 591
Score = 80.2 bits (189), Expect = 4e-15
Identities = 49/160 (30%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Frame = +1
Query: 37 KVPPTRPGSCVED--------SRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYR 192
KVP RPGSC +++ D + F ++HPLM +A+ +P+L++ +Y
Sbjct: 189 KVPYPRPGSCASKVNGGRYGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYN 248
Query: 193 FSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVI 372
IAV +V+A +G +YDV++IGTD+G V+K + + + E S+EE ++
Sbjct: 249 LKQIAV-DRVEAEDG-QYDVLFIGTDNGIVLKVITIYNQE---MESMEE--------VIL 295
Query: 373 SEVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
E+Q+ VPI M ++ ++L + S + V HC
Sbjct: 296 EELQIFKDPVPIISMEISSKRQQLYIGSASAVAQVRFHHC 335
>AB002329-1|BAA20789.2| 814|Homo sapiens KIAA0331 protein.
Length = 814
Score = 80.2 bits (189), Expect = 4e-15
Identities = 49/160 (30%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Frame = +1
Query: 37 KVPPTRPGSCVED--------SRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYR 192
KVP RPGSC +++ D + F ++HPLM +A+ +P+L++ +Y
Sbjct: 412 KVPYPRPGSCASKVNGGRYGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYN 471
Query: 193 FSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVI 372
IAV +V+A +G +YDV++IGTD+G V+K + + + E S+EE ++
Sbjct: 472 LKQIAV-DRVEAEDG-QYDVLFIGTDNGIVLKVITIYNQE---MESMEE--------VIL 518
Query: 373 SEVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
E+Q+ VPI M ++ ++L + S + V HC
Sbjct: 519 EELQIFKDPVPIISMEISSKRQQLYIGSASAVAQVRFHHC 558
>BC042914-1|AAH42914.1| 785|Homo sapiens sema domain,
immunoglobulin domain (Ig), short basic domain,
secreted, (semapho protein.
Length = 785
Score = 79.8 bits (188), Expect = 5e-15
Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 8/167 (4%)
Frame = +1
Query: 16 WLPLEKEKVPPTRPGSC--------VEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLI 171
W+P K+P RPG+C ++ +++ D +NF+++HPLM +AV RP+++
Sbjct: 397 WMPFSG-KMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRPLVV 455
Query: 172 RVSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKN 351
R YR + IAV QV A +G +Y+V+++GTD G V K + + + D +EE
Sbjct: 456 RTGAPYRLTTIAV-DQVDAADG-RYEVLFLGTDRGTVQKVIVLPKD----DQEMEE---- 505
Query: 352 PVKTAVISEVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
++ EV+V P+K M ++ ++L VAS + ++L C
Sbjct: 506 ----LMLEEVEVFKDPAPVKTMTISSKRQQLYVASAVGVTHLSLHRC 548
>AC000063-1|AAB46344.1| 785|Homo sapiens semaphorin IV protein.
Length = 785
Score = 79.8 bits (188), Expect = 5e-15
Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 8/167 (4%)
Frame = +1
Query: 16 WLPLEKEKVPPTRPGSC--------VEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLI 171
W+P K+P RPG+C ++ +++ D +NF+++HPLM +AV RP+++
Sbjct: 397 WMPFSG-KMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRPLVV 455
Query: 172 RVSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKN 351
R YR + IAV QV A +G +Y+V+++GTD G V K + + + D +EE
Sbjct: 456 RTGAPYRLTTIAV-DQVDAADG-RYEVLFLGTDRGTVQKVIVLPKD----DQELEE---- 505
Query: 352 PVKTAVISEVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
++ EV+V P+K M ++ ++L VAS + ++L C
Sbjct: 506 ----LMLEEVEVFKDPAPVKTMTISSKRQQLYVASAVGVTHLSLHRC 548
>AB209259-1|BAD92496.1| 750|Homo sapiens semaphorin 3F variant
protein.
Length = 750
Score = 79.8 bits (188), Expect = 5e-15
Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 8/167 (4%)
Frame = +1
Query: 16 WLPLEKEKVPPTRPGSC--------VEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLI 171
W+P K+P RPG+C ++ +++ D +NF+++HPLM +AV RP+++
Sbjct: 362 WMPFSG-KMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRPLVV 420
Query: 172 RVSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKN 351
R YR + IAV QV A +G +Y+V+++GTD G V K + + + D +EE
Sbjct: 421 RTGAPYRLTTIAV-DQVDAADG-RYEVLFLGTDRGTVQKVIVLPKD----DQEMEE---- 470
Query: 352 PVKTAVISEVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
++ EV+V P+K M ++ ++L VAS + ++L C
Sbjct: 471 ----LMLEEVEVFKDPAPVKTMTISSKRQQLYVASAVGVTHLSLHRC 513
>U33920-1|AAC50568.1| 785|Homo sapiens semaphorin protein.
Length = 785
Score = 79.0 bits (186), Expect = 8e-15
Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 8/167 (4%)
Frame = +1
Query: 16 WLPLEKEKVPPTRPGSC--------VEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLI 171
W+P K+P RPG+C ++ +++ D +NF+++HPLM +AV RP+++
Sbjct: 397 WMPFSG-KMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRPLVV 455
Query: 172 RVSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKN 351
R YR + IAV QV A +G +Y+V+++GTD G V K + + + D +EE
Sbjct: 456 RTGAPYRLTTIAV-DQVDAGDG-RYEVLFLGTDRGTVQKVIVLPKD----DQEMEE---- 505
Query: 352 PVKTAVISEVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
++ EV+V P+K M ++ ++L VAS + ++L C
Sbjct: 506 ----LMLEEVEVFKDPAPVKTMTISSKRQQLYVASAVGVTHLSLHRC 548
>U38276-1|AAB18276.1| 753|Homo sapiens semaphorin III family
homolog protein.
Length = 753
Score = 78.6 bits (185), Expect = 1e-14
Identities = 51/167 (30%), Positives = 90/167 (53%), Gaps = 8/167 (4%)
Frame = +1
Query: 16 WLPLEKEKVPPTRPGSC--------VEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLI 171
W+P K+P RPG+C ++ +++ D +NF+++HPLM +AV RP+++
Sbjct: 365 WMPFSG-KMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRPLVV 423
Query: 172 RVSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKN 351
R YR + IAV QV + +G +Y+V+++GTD G V K + + + D +EE
Sbjct: 424 RTGAPYRLTTIAV-DQVDSADG-RYEVLFLGTDRGTVQKVIVLPKD----DQEMEE---- 473
Query: 352 PVKTAVISEVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
++ EV+V P+K M ++ ++L VAS + ++L C
Sbjct: 474 ----LMLEEVEVFKDPAPVKTMTISSKRQQLYVASAVGVTHLSLHRC 516
>AK027867-1|BAB55418.1| 418|Homo sapiens protein ( Homo sapiens
cDNA FLJ14961 fis, clone PLACE4000230, highly similar to
Mus musculus semaphorin VIa mRNA. ).
Length = 418
Score = 77.0 bits (181), Expect = 3e-14
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 8/116 (6%)
Frame = +1
Query: 10 SNWLPLEKEKVPPTRPGSCVEDS--------RNLTDSEVNFIKTHPLMDKAVPSFLARPV 165
S W P+ E+VP RPG C S D +NFIKTHPLMD+AVPS RP
Sbjct: 290 STWTPVPDERVPKPRPGCCAGSSSLERYATSNEFPDDTLNFIKTHPLMDEAVPSIFNRPW 349
Query: 166 LIRVSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASV 333
+R ++YR + IAV A + V+++G++ G ++K + N G + S+
Sbjct: 350 FLRTMVRYRLTKIAV--DTAAGPYQNHTVVFLGSEKGIILKFLARIGNSGFLNDSL 403
>AK027501-1|BAB55158.1| 699|Homo sapiens protein ( Homo sapiens
cDNA FLJ14595 fis, clone NT2RM4002194, highly similar to
Mus musculus semaphorin VIa mRNA. ).
Length = 699
Score = 77.0 bits (181), Expect = 3e-14
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 8/116 (6%)
Frame = +1
Query: 10 SNWLPLEKEKVPPTRPGSCVEDS--------RNLTDSEVNFIKTHPLMDKAVPSFLARPV 165
S W P+ E+VP RPG C S D +NFIKTHPLMD+AVPS RP
Sbjct: 20 STWTPVPDERVPKPRPGCCAGSSSLERYATSNEFPDDTLNFIKTHPLMDEAVPSIFNRPW 79
Query: 166 LIRVSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASV 333
+R ++YR + IAV A + V+++G++ G ++K + N G + S+
Sbjct: 80 FLRTMVRYRLTKIAV--DTAAGPYQNHTVVFLGSEKGIILKFLARIGNSGFLNDSL 133
>AF279656-1|AAG29378.1| 1030|Homo sapiens semaphorin SEMA6A1
protein.
Length = 1030
Score = 77.0 bits (181), Expect = 3e-14
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 8/116 (6%)
Frame = +1
Query: 10 SNWLPLEKEKVPPTRPGSCVEDS--------RNLTDSEVNFIKTHPLMDKAVPSFLARPV 165
S W P+ E+VP RPG C S D +NFIKTHPLMD+AVPS RP
Sbjct: 351 STWTPVPDERVPKPRPGCCAGSSSLERYATSNEFPDDTLNFIKTHPLMDEAVPSIFNRPW 410
Query: 166 LIRVSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASV 333
+R ++YR + IAV A + V+++G++ G ++K + N G + S+
Sbjct: 411 FLRTMVRYRLTKIAV--DTAAGPYQNHTVVFLGSEKGIILKFLARIGNSGFLNDSL 464
>AB037789-1|BAA92606.1| 1049|Homo sapiens KIAA1368 protein protein.
Length = 1049
Score = 77.0 bits (181), Expect = 3e-14
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 8/116 (6%)
Frame = +1
Query: 10 SNWLPLEKEKVPPTRPGSCVEDS--------RNLTDSEVNFIKTHPLMDKAVPSFLARPV 165
S W P+ E+VP RPG C S D +NFIKTHPLMD+AVPS RP
Sbjct: 353 STWTPVPDERVPKPRPGCCAGSSSLERYATSNEFPDDTLNFIKTHPLMDEAVPSIFNRPW 412
Query: 166 LIRVSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASV 333
+R ++YR + IAV A + V+++G++ G ++K + N G + S+
Sbjct: 413 FLRTMVRYRLTKIAV--DTAAGPYQNHTVVFLGSEKGIILKFLARIGNSGFLNDSL 466
>BC030690-1|AAH30690.1| 751|Homo sapiens sema domain,
immunoglobulin domain (Ig), short basic domain,
secreted, (semapho protein.
Length = 751
Score = 71.7 bits (168), Expect = 1e-12
Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Frame = +1
Query: 37 KVPPTRPGSC--------VEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYR 192
++P RPG+C + ++ D V FI+ HPLM ++ RP+++R+ Y+
Sbjct: 369 RIPYPRPGTCPGGAFTPNMRTTKEFPDDVVTFIRNHPLMYNSIYPIHKRPLIVRIGTDYK 428
Query: 193 FSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVI 372
++ IAV +V A +G +Y V+++GTD G V K V + +N V S E ++
Sbjct: 429 YTKIAV-DRVNAADG-RYHVLFLGTDRGTVQKVVVLPTNNSV---SGE---------LIL 474
Query: 373 SEVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
E++V PI M ++ ++L V+S + + V+L C
Sbjct: 475 EELEVFKNHAPITTMKISSKKQQLYVSSNEGVSQVSLHRC 514
>AB000220-1|BAA32398.1| 751|Homo sapiens semaphorin E protein.
Length = 751
Score = 71.7 bits (168), Expect = 1e-12
Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Frame = +1
Query: 37 KVPPTRPGSC--------VEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYR 192
++P RPG+C + ++ D V FI+ HPLM ++ RP+++R+ Y+
Sbjct: 369 RIPYPRPGTCPGGAFTPNMRTTKEFPDDVVTFIRNHPLMYNSIYPIHKRPLIVRIGTDYK 428
Query: 193 FSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVI 372
++ IAV +V A +G +Y V+++GTD G V K V + +N V S E ++
Sbjct: 429 YTKIAV-DRVNAADG-RYHVLFLGTDRGTVQKVVVLPTNNSV---SGE---------LIL 474
Query: 373 SEVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
E++V PI M ++ ++L V+S + + V+L C
Sbjct: 475 EELEVFKNHAPITTMKISSKKQQLYVSSNEGVSQVSLHRC 514
>BC029590-1|AAH29590.1| 416|Homo sapiens SEMA3D protein protein.
Length = 416
Score = 69.3 bits (162), Expect = 7e-12
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Frame = +1
Query: 37 KVPPTRPGSC--------VEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYR 192
++P RPG+C ++ +R+ D ++FIK H +M K+V P R+++ YR
Sbjct: 28 RIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFIKRHSVMYKSVYPVAGGPTFKRINVDYR 87
Query: 193 FSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVI 372
+ I V V A +G +YDVM++GTD G V+K V++ S E+++ V V+
Sbjct: 88 LTQIVV-DHVIAEDG-QYDVMFLGTDIGTVLKVVSI---------SKEKWNMEEV---VL 133
Query: 373 SEVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
E+Q+ I M ++L ++L + S D + ++L C
Sbjct: 134 EELQIFKHSSIILNMELSLKQQQLYIGSRDGLVQLSLHRC 173
>AY358937-1|AAQ89296.1| 777|Homo sapiens Collapsin-2 protein.
Length = 777
Score = 69.3 bits (162), Expect = 7e-12
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Frame = +1
Query: 37 KVPPTRPGSC--------VEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYR 192
++P RPG+C ++ +R+ D ++FIK H +M K+V P R+++ YR
Sbjct: 389 RIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFIKRHSVMYKSVYPVAGGPTFKRINVDYR 448
Query: 193 FSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVI 372
+ I V V A +G +YDVM++GTD G V+K V++ S E+++ V V+
Sbjct: 449 LTQIVV-DHVIAEDG-QYDVMFLGTDIGTVLKVVSI---------SKEKWNMEEV---VL 494
Query: 373 SEVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
E+Q+ I M ++L ++L + S D + ++L C
Sbjct: 495 EELQIFKHSSIILNMELSLKQQQLYIGSRDGLVQLSLHRC 534
>U60800-1|AAC50810.1| 862|Homo sapiens semaphorin protein.
Length = 862
Score = 67.7 bits (158), Expect = 2e-11
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
Frame = +1
Query: 40 VPPTRPGSCVED---------SRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYR 192
VP RPG+C++ S NL D + F+K HPLMD +V RP LI+ + Y
Sbjct: 362 VPKPRPGACIDSEARAANYTSSLNLPDKTLQFVKDHPLMDDSVTPIDNRPRLIKKDVNY- 420
Query: 193 FSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVI 372
+ I V + QA++G YDVM++ TD G + KA+++ + + + PV+T ++
Sbjct: 421 -TQIVV-DRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLL 478
Query: 373 S 375
S
Sbjct: 479 S 479
>L26081-1|AAA65938.1| 771|Homo sapiens semaphorin-III protein.
Length = 771
Score = 67.7 bits (158), Expect = 2e-11
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Frame = +1
Query: 16 WLPLEKEKVPPTRPGSC-------VEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIR 174
W+P + +VP RPG+C + +++L D + F ++HP M V RP++I+
Sbjct: 366 WVPYQG-RVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPMNNRPIVIK 424
Query: 175 VSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNP 354
+ Y+F+ I V +V A +G +YDVM+IGTD G V+K V++ E +D +EE
Sbjct: 425 TDVNYQFTQIVV-DRVDAEDG-QYDVMFIGTDVGTVLKVVSI-PKETWYD--LEE----- 474
Query: 355 VKTAVISEVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
++ E+ V I M ++ ++L + S + + L C
Sbjct: 475 ---VLLEEMTVFREPTAISAMELSTKQQQLYIGSTAGVAQLPLHRC 517
>BC111416-1|AAI11417.1| 771|Homo sapiens sema domain,
immunoglobulin domain (Ig), short basic domain,
secreted, (semapho protein.
Length = 771
Score = 67.7 bits (158), Expect = 2e-11
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Frame = +1
Query: 16 WLPLEKEKVPPTRPGSC-------VEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIR 174
W+P + +VP RPG+C + +++L D + F ++HP M V RP++I+
Sbjct: 366 WVPYQG-RVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPMNNRPIVIK 424
Query: 175 VSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNP 354
+ Y+F+ I V +V A +G +YDVM+IGTD G V+K V++ E +D +EE
Sbjct: 425 TDVNYQFTQIVV-DRVDAEDG-QYDVMFIGTDVGTVLKVVSI-PKETWYD--LEE----- 474
Query: 355 VKTAVISEVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
++ E+ V I M ++ ++L + S + + L C
Sbjct: 475 ---VLLEEMTVFREPTAISAMELSTKQQQLYIGSTAGVAQLPLHRC 517
>BC054500-1|AAH54500.1| 862|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 862
Score = 67.7 bits (158), Expect = 2e-11
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
Frame = +1
Query: 40 VPPTRPGSCVED---------SRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYR 192
VP RPG+C++ S NL D + F+K HPLMD +V RP LI+ + Y
Sbjct: 362 VPKPRPGACIDSEARAANYTSSLNLPDKTLQFVKDHPLMDDSVTPIDNRPRLIKKDVNY- 420
Query: 193 FSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVI 372
+ I V + QA++G YDVM++ TD G + KA+++ + + + PV+T ++
Sbjct: 421 -TQIVV-DRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLL 478
Query: 373 S 375
S
Sbjct: 479 S 479
>AL929575-4|CAI43250.2| 862|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 862
Score = 67.7 bits (158), Expect = 2e-11
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
Frame = +1
Query: 40 VPPTRPGSCVED---------SRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYR 192
VP RPG+C++ S NL D + F+K HPLMD +V RP LI+ + Y
Sbjct: 362 VPKPRPGACIDSEARAANYTSSLNLPDKTLQFVKDHPLMDDSVTPIDNRPRLIKKDVNY- 420
Query: 193 FSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVI 372
+ I V + QA++G YDVM++ TD G + KA+++ + + + PV+T ++
Sbjct: 421 -TQIVV-DRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLL 478
Query: 373 S 375
S
Sbjct: 479 S 479
>AL590233-3|CAI17379.2| 862|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 862
Score = 67.7 bits (158), Expect = 2e-11
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
Frame = +1
Query: 40 VPPTRPGSCVED---------SRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYR 192
VP RPG+C++ S NL D + F+K HPLMD +V RP LI+ + Y
Sbjct: 362 VPKPRPGACIDSEARAANYTSSLNLPDKTLQFVKDHPLMDDSVTPIDNRPRLIKKDVNY- 420
Query: 193 FSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVI 372
+ I V + QA++G YDVM++ TD G + KA+++ + + + PV+T ++
Sbjct: 421 -TQIVV-DRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLL 478
Query: 373 S 375
S
Sbjct: 479 S 479
>AB210030-1|BAE06112.1| 870|Homo sapiens SEMA4D variant protein
protein.
Length = 870
Score = 67.7 bits (158), Expect = 2e-11
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
Frame = +1
Query: 40 VPPTRPGSCVED---------SRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYR 192
VP RPG+C++ S NL D + F+K HPLMD +V RP LI+ + Y
Sbjct: 370 VPKPRPGACIDSEARAANYTSSLNLPDKTLQFVKDHPLMDDSVTPIDNRPRLIKKDVNY- 428
Query: 193 FSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVI 372
+ I V + QA++G YDVM++ TD G + KA+++ + + + PV+T ++
Sbjct: 429 -TQIVV-DRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLL 486
Query: 373 S 375
S
Sbjct: 487 S 487
>AC073221-1|AAP22350.1| 301|Homo sapiens unknown protein.
Length = 301
Score = 67.3 bits (157), Expect = 3e-11
Identities = 37/102 (36%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Frame = +1
Query: 16 WLPLEKEKVPPTRPGSC-------VEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIR 174
W+P + +VP RPG+C + +++L D + F ++HP M V RP++I+
Sbjct: 183 WVPYQG-RVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPMNNRPIVIK 241
Query: 175 VSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNV 300
+ Y+F+ I V +V A +G +YDVM+IGTD G V+K V++
Sbjct: 242 TDVNYQFTQIVV-DRVDAEDG-QYDVMFIGTDVGTVLKVVSI 281
>U73167-5|AAC02731.1| 750|Homo sapiens semaphorin V protein.
Length = 750
Score = 66.5 bits (155), Expect = 5e-11
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 7/159 (4%)
Frame = +1
Query: 37 KVPPTRPGSC-------VEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYRF 195
+VP RPG C +++ D + F + HPLM +V RP+ ++V Y F
Sbjct: 372 RVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPTGGRPLFLQVGANYTF 431
Query: 196 SAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVIS 375
+ IA +V A +G+ YDV++IGTD G V+K + SV + S+ + ++
Sbjct: 432 TQIAA-DRVAAADGH-YDVLFIGTDVGTVLKVI-----------SVPKGSRPSAEGLLLE 478
Query: 376 EVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
E+ V + M ++ +L VAS + + L C
Sbjct: 479 ELHVFEDSAAVTSMQISSKRHQLYVASRSAVAQIALHRC 517
>U28369-1|AAD09138.1| 749|Homo sapiens semaphorin V protein.
Length = 749
Score = 66.5 bits (155), Expect = 5e-11
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 7/159 (4%)
Frame = +1
Query: 37 KVPPTRPGSC-------VEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYRF 195
+VP RPG C +++ D + F + HPLM +V RP+ ++V Y F
Sbjct: 371 RVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPTGGRPLFLQVGANYTF 430
Query: 196 SAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVIS 375
+ IA +V A +G+ YDV++IGTD G V+K + SV + S+ + ++
Sbjct: 431 TQIAA-DRVAAADGH-YDVLFIGTDVGTVLKVI-----------SVPKGSRPSAEGLLLE 477
Query: 376 EVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
E+ V + M ++ +L VAS + + L C
Sbjct: 478 ELHVFEDSAAVTSMQISSKRHQLYVASRSAVAQIALHRC 516
>BC044602-1|AAH44602.1| 573|Homo sapiens SEMA3B protein protein.
Length = 573
Score = 66.5 bits (155), Expect = 5e-11
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 7/159 (4%)
Frame = +1
Query: 37 KVPPTRPGSC-------VEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYRF 195
+VP RPG C +++ D + F + HPLM +V RP+ ++V Y F
Sbjct: 195 RVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPTGGRPLFLQVGANYTF 254
Query: 196 SAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVIS 375
+ IA +V A +G+ YDV++IGTD G V+K + SV + S+ + ++
Sbjct: 255 TQIAA-DRVAAADGH-YDVLFIGTDVGTVLKVI-----------SVPKGSRPSAEGLLLE 301
Query: 376 EVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
E+ V + M ++ +L VAS + + L C
Sbjct: 302 ELHVFEDSAAVTSMQISSKRHQLYVASRSAVAQIALHRC 340
>BC024220-1|AAH24220.1| 748|Homo sapiens sema domain,
immunoglobulin domain (Ig), short basic domain,
secreted, (semapho protein.
Length = 748
Score = 66.5 bits (155), Expect = 5e-11
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 7/159 (4%)
Frame = +1
Query: 37 KVPPTRPGSC-------VEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYRF 195
+VP RPG C +++ D + F + HPLM +V RP+ ++V Y F
Sbjct: 370 RVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPTGGRPLFLQVGANYTF 429
Query: 196 SAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVIS 375
+ IA +V A +G+ YDV++IGTD G V+K + SV + S+ + ++
Sbjct: 430 TQIAA-DRVAAADGH-YDVLFIGTDVGTVLKVI-----------SVPKGSRPSAEGLLLE 476
Query: 376 EVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
E+ V + M ++ +L VAS + + L C
Sbjct: 477 ELHVFEDSAAVTSMQISSKRHQLYVASRSAVAQIALHRC 515
>BC013975-1|AAH13975.1| 748|Homo sapiens sema domain,
immunoglobulin domain (Ig), short basic domain,
secreted, (semapho protein.
Length = 748
Score = 66.5 bits (155), Expect = 5e-11
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 7/159 (4%)
Frame = +1
Query: 37 KVPPTRPGSC-------VEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYRF 195
+VP RPG C +++ D + F + HPLM +V RP+ ++V Y F
Sbjct: 370 RVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPTGGRPLFLQVGANYTF 429
Query: 196 SAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVIS 375
+ IA +V A +G+ YDV++IGTD G V+K + SV + S+ + ++
Sbjct: 430 TQIAA-DRVAAADGH-YDVLFIGTDVGTVLKVI-----------SVPKGSRPSAEGLLLE 476
Query: 376 EVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
E+ V + M ++ +L VAS + + L C
Sbjct: 477 ELHVFEDSAAVTSMQISSKRHQLYVASRSAVAQIALHRC 515
>BC009113-1|AAH09113.1| 635|Homo sapiens SEMA3B protein protein.
Length = 635
Score = 66.5 bits (155), Expect = 5e-11
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 7/159 (4%)
Frame = +1
Query: 37 KVPPTRPGSC-------VEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYRF 195
+VP RPG C +++ D + F + HPLM +V RP+ ++V Y F
Sbjct: 257 RVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPTGGRPLFLQVGANYTF 316
Query: 196 SAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVIS 375
+ IA +V A +G+ YDV++IGTD G V+K + SV + S+ + ++
Sbjct: 317 TQIAA-DRVAAADGH-YDVLFIGTDVGTVLKVI-----------SVPKGSRPSAEGLLLE 363
Query: 376 EVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
E+ V + M ++ +L VAS + + L C
Sbjct: 364 ELHVFEDSAAVTSMQISSKRHQLYVASRSAVAQIALHRC 402
>AB209322-1|BAD92559.1| 498|Homo sapiens semaphorin 3B isoform 2
precursor variant protein.
Length = 498
Score = 66.5 bits (155), Expect = 5e-11
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 7/159 (4%)
Frame = +1
Query: 37 KVPPTRPGSC-------VEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYRF 195
+VP RPG C +++ D + F + HPLM +V RP+ ++V Y F
Sbjct: 120 RVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPTGGRPLFLQVGANYTF 179
Query: 196 SAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVIS 375
+ IA +V A +G+ YDV++IGTD G V+K + SV + S+ + ++
Sbjct: 180 TQIAA-DRVAAADGH-YDVLFIGTDVGTVLKVI-----------SVPKGSRPSAEGLLLE 226
Query: 376 EVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
E+ V + M ++ +L VAS + + L C
Sbjct: 227 ELHVFEDSAAVTSMQISSKRHQLYVASRSAVAQIALHRC 265
>AB083186-1|BAB88870.1| 754|Homo sapiens semaphorin 3B protein.
Length = 754
Score = 66.5 bits (155), Expect = 5e-11
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 7/159 (4%)
Frame = +1
Query: 37 KVPPTRPGSC-------VEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYRF 195
+VP RPG C +++ D + F + HPLM +V RP+ ++V Y F
Sbjct: 376 RVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPTGGRPLFLQVGANYTF 435
Query: 196 SAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVIS 375
+ IA +V A +G+ YDV++IGTD G V+K + SV + S+ + ++
Sbjct: 436 TQIAA-DRVAAADGH-YDVLFIGTDVGTVLKVI-----------SVPKGSRPSAEGLLLE 482
Query: 376 EVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
E+ V + M ++ +L VAS + + L C
Sbjct: 483 ELHVFEDSAAVTSMQISSKRHQLYVASRSAVAQIALHRC 521
>BC150253-1|AAI50254.1| 1011|Homo sapiens SEMA6D protein protein.
Length = 1011
Score = 66.1 bits (154), Expect = 6e-11
Identities = 52/173 (30%), Positives = 80/173 (46%), Gaps = 12/173 (6%)
Frame = +1
Query: 10 SNWLPLEKEKVPPTRPGSCVED--------SRNLTDSEVNFIKTHPLMDKAVPSFLARPV 165
S W + ++KVP RPG C + S + D ++FIK+HPLMD AVP P
Sbjct: 352 SVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPW 411
Query: 166 LIRVSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVAS----NEGVFDASV 333
+ ++YR +AI+V A Y V+++G++ G V+K + S N+ V +
Sbjct: 412 FTKTRVRYRLTAISV--DHSAGPYQNYTVIFVGSEAGMVLKVLAKTSPFSLNDSVLLEEI 469
Query: 334 EEYSKNPVKTAVISEVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
E Y N K + +E + + + H A L VA I + LS C
Sbjct: 470 EAY--NHAKCSAENEEDKKVISLQLDKDHHA-----LYVAFSSCIIRIPLSRC 515
>BC142617-1|AAI42618.1| 888|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6B
protein.
Length = 888
Score = 66.1 bits (154), Expect = 6e-11
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Frame = +1
Query: 10 SNWLPLEKEKVPPTRPGSCVED------SRNLTDSEVNFIKTHPLMDKAVPSFLARPVLI 171
S W P+ +++VP RPG C S L D +NF+KTHPLMD+AVPS P ++
Sbjct: 360 SIWTPVPEDQVPRPRPGCCAAPGMQYNASSALPDDILNFVKTHPLMDEAVPSLGHAPWIL 419
Query: 172 RVSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIK 288
R ++++ + +AV V A V+++G++ G V+K
Sbjct: 420 RTLMRHQLTRVAV--DVGAGPWGNQTVVFLGSEAGTVLK 456
>AY358939-1|AAQ89298.1| 888|Homo sapiens semaphorin Z protein.
Length = 888
Score = 66.1 bits (154), Expect = 6e-11
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Frame = +1
Query: 10 SNWLPLEKEKVPPTRPGSCVED------SRNLTDSEVNFIKTHPLMDKAVPSFLARPVLI 171
S W P+ +++VP RPG C S L D +NF+KTHPLMD+AVPS P ++
Sbjct: 360 SIWTPVPEDQVPRPRPGCCAAPGMQYNASSALPDDILNFVKTHPLMDEAVPSLGHAPWIL 419
Query: 172 RVSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIK 288
R ++++ + +AV V A V+++G++ G V+K
Sbjct: 420 RTLMRHQLTRVAV--DVGAGPWGNQTVVFLGSEAGTVLK 456
>AF389430-1|AAM69453.1| 1011|Homo sapiens semaphorin 6D isoform 1
protein.
Length = 1011
Score = 66.1 bits (154), Expect = 6e-11
Identities = 52/173 (30%), Positives = 80/173 (46%), Gaps = 12/173 (6%)
Frame = +1
Query: 10 SNWLPLEKEKVPPTRPGSCVED--------SRNLTDSEVNFIKTHPLMDKAVPSFLARPV 165
S W + ++KVP RPG C + S + D ++FIK+HPLMD AVP P
Sbjct: 352 SVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPW 411
Query: 166 LIRVSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVAS----NEGVFDASV 333
+ ++YR +AI+V A Y V+++G++ G V+K + S N+ V +
Sbjct: 412 FTKTRVRYRLTAISV--DHSAGPYQNYTVIFVGSEAGMVLKVLAKTSPFSLNDSVLLEEI 469
Query: 334 EEYSKNPVKTAVISEVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
E Y N K + +E + + + H A L VA I + LS C
Sbjct: 470 EAY--NHAKCSAENEEDKKVISLQLDKDHHA-----LYVAFSSCIIRIPLSRC 515
>AF389429-1|AAM69452.1| 1073|Homo sapiens semaphorin 6D isoform 4
protein.
Length = 1073
Score = 66.1 bits (154), Expect = 6e-11
Identities = 52/173 (30%), Positives = 80/173 (46%), Gaps = 12/173 (6%)
Frame = +1
Query: 10 SNWLPLEKEKVPPTRPGSCVED--------SRNLTDSEVNFIKTHPLMDKAVPSFLARPV 165
S W + ++KVP RPG C + S + D ++FIK+HPLMD AVP P
Sbjct: 352 SVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPW 411
Query: 166 LIRVSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVAS----NEGVFDASV 333
+ ++YR +AI+V A Y V+++G++ G V+K + S N+ V +
Sbjct: 412 FTKTRVRYRLTAISV--DHSAGPYQNYTVIFVGSEAGMVLKVLAKTSPFSLNDSVLLEEI 469
Query: 334 EEYSKNPVKTAVISEVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
E Y N K + +E + + + H A L VA I + LS C
Sbjct: 470 EAY--NHAKCSAENEEDKKVISLQLDKDHHA-----LYVAFSSCIIRIPLSRC 515
>AF389428-1|AAM69451.1| 1017|Homo sapiens semaphorin 6D isoform 3
protein.
Length = 1017
Score = 66.1 bits (154), Expect = 6e-11
Identities = 52/173 (30%), Positives = 80/173 (46%), Gaps = 12/173 (6%)
Frame = +1
Query: 10 SNWLPLEKEKVPPTRPGSCVED--------SRNLTDSEVNFIKTHPLMDKAVPSFLARPV 165
S W + ++KVP RPG C + S + D ++FIK+HPLMD AVP P
Sbjct: 352 SVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPW 411
Query: 166 LIRVSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVAS----NEGVFDASV 333
+ ++YR +AI+V A Y V+++G++ G V+K + S N+ V +
Sbjct: 412 FTKTRVRYRLTAISV--DHSAGPYQNYTVIFVGSEAGMVLKVLAKTSPFSLNDSVLLEEI 469
Query: 334 EEYSKNPVKTAVISEVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
E Y N K + +E + + + H A L VA I + LS C
Sbjct: 470 EAY--NHAKCSAENEEDKKVISLQLDKDHHA-----LYVAFSSCIIRIPLSRC 515
>AF389427-1|AAM69450.1| 998|Homo sapiens semaphorin 6D isoform 2
protein.
Length = 998
Score = 66.1 bits (154), Expect = 6e-11
Identities = 52/173 (30%), Positives = 80/173 (46%), Gaps = 12/173 (6%)
Frame = +1
Query: 10 SNWLPLEKEKVPPTRPGSCVED--------SRNLTDSEVNFIKTHPLMDKAVPSFLARPV 165
S W + ++KVP RPG C + S + D ++FIK+HPLMD AVP P
Sbjct: 352 SVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPW 411
Query: 166 LIRVSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVAS----NEGVFDASV 333
+ ++YR +AI+V A Y V+++G++ G V+K + S N+ V +
Sbjct: 412 FTKTRVRYRLTAISV--DHSAGPYQNYTVIFVGSEAGMVLKVLAKTSPFSLNDSVLLEEI 469
Query: 334 EEYSKNPVKTAVISEVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
E Y N K + +E + + + H A L VA I + LS C
Sbjct: 470 EAY--NHAKCSAENEEDKKVISLQLDKDHHA-----LYVAFSSCIIRIPLSRC 515
>AF293363-1|AAK16831.1| 687|Homo sapiens semaphorin 6B isoform 2
protein.
Length = 687
Score = 66.1 bits (154), Expect = 6e-11
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Frame = +1
Query: 10 SNWLPLEKEKVPPTRPGSCVED------SRNLTDSEVNFIKTHPLMDKAVPSFLARPVLI 171
S W P+ +++VP RPG C S L D +NF+KTHPLMD+AVPS P ++
Sbjct: 360 SIWTPVPEDQVPRPRPGCCAAPGMQYNASSALPDDILNFVKTHPLMDEAVPSLGHAPWIL 419
Query: 172 RVSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIK 288
R ++++ + +AV V A V+++G++ G V+K
Sbjct: 420 RTLMRHQLTRVAV--DVGAGPWGNQTVVFLGSEAGTVLK 456
>AF216389-1|AAF87661.1| 517|Homo sapiens semaphorin 6B isoform 1
protein.
Length = 517
Score = 66.1 bits (154), Expect = 6e-11
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Frame = +1
Query: 10 SNWLPLEKEKVPPTRPGSCVED------SRNLTDSEVNFIKTHPLMDKAVPSFLARPVLI 171
S W P+ +++VP RPG C S L D +NF+KTHPLMD+AVPS P ++
Sbjct: 360 SIWTPVPEDQVPRPRPGCCAAPGMQYNASSALPDDILNFVKTHPLMDEAVPSLGHAPWIL 419
Query: 172 RVSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIK 288
R ++++ + +AV V A V+++G++ G V+K
Sbjct: 420 RTLMRHQLTRVAV--DVGAGPWGNQTVVFLGSEAGTVLK 456
>AB040912-1|BAA96003.2| 1022|Homo sapiens KIAA1479 protein protein.
Length = 1022
Score = 66.1 bits (154), Expect = 6e-11
Identities = 52/173 (30%), Positives = 80/173 (46%), Gaps = 12/173 (6%)
Frame = +1
Query: 10 SNWLPLEKEKVPPTRPGSCVED--------SRNLTDSEVNFIKTHPLMDKAVPSFLARPV 165
S W + ++KVP RPG C + S + D ++FIK+HPLMD AVP P
Sbjct: 363 SVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPW 422
Query: 166 LIRVSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVAS----NEGVFDASV 333
+ ++YR +AI+V A Y V+++G++ G V+K + S N+ V +
Sbjct: 423 FTKTRVRYRLTAISV--DHSAGPYQNYTVIFVGSEAGMVLKVLAKTSPFSLNDSVLLEEI 480
Query: 334 EEYSKNPVKTAVISEVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
E Y N K + +E + + + H A L VA I + LS C
Sbjct: 481 EAY--NHAKCSAENEEDKKVISLQLDKDHHA-----LYVAFSSCIIRIPLSRC 526
>AB022433-1|BAB20669.1| 888|Homo sapiens semaphorin Z protein.
Length = 888
Score = 66.1 bits (154), Expect = 6e-11
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Frame = +1
Query: 10 SNWLPLEKEKVPPTRPGSCVED------SRNLTDSEVNFIKTHPLMDKAVPSFLARPVLI 171
S W P+ +++VP RPG C S L D +NF+KTHPLMD+AVPS P ++
Sbjct: 360 SIWTPVPEDQVPRPRPGCCAAPGMQYNASSALPDDILNFVKTHPLMDEAVPSLGHAPWIL 419
Query: 172 RVSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIK 288
R ++++ + +AV V A V+++G++ G V+K
Sbjct: 420 RTLMRHQLTRVAV--DVGAGPWGNQTVVFLGSEAGTVLK 456
>BC109104-1|AAI09105.1| 833|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 833
Score = 64.9 bits (151), Expect = 1e-10
Identities = 38/128 (29%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Frame = +1
Query: 34 EKVPPTRPGSCVED---------SRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQ 186
+ VP RPGSC+ + S L D+ +NF+K HPLM++ V +RP+L++
Sbjct: 360 DPVPSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTN 419
Query: 187 YRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTA 366
+ V +V ++G Y V++IGT DG ++KAV++ + + ++ + + P+++
Sbjct: 420 FTH---LVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIE-ELQLFDQEPMRSL 475
Query: 367 VISEVQVL 390
V+S+ + L
Sbjct: 476 VLSQSKKL 483
>BC109103-1|AAI09104.1| 833|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 833
Score = 64.9 bits (151), Expect = 1e-10
Identities = 38/128 (29%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Frame = +1
Query: 34 EKVPPTRPGSCVED---------SRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQ 186
+ VP RPGSC+ + S L D+ +NF+K HPLM++ V +RP+L++
Sbjct: 360 DPVPSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTN 419
Query: 187 YRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTA 366
+ V +V ++G Y V++IGT DG ++KAV++ + + ++ + + P+++
Sbjct: 420 FTH---LVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIE-ELQLFDQEPMRSL 475
Query: 367 VISEVQVL 390
V+S+ + L
Sbjct: 476 VLSQSKKL 483
>BC062984-1|AAH62984.1| 543|Homo sapiens SEMA4C protein protein.
Length = 543
Score = 64.9 bits (151), Expect = 1e-10
Identities = 38/128 (29%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Frame = +1
Query: 34 EKVPPTRPGSCVED---------SRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQ 186
+ VP RPGSC+ + S L D+ +NF+K HPLM++ V +RP+L++
Sbjct: 70 DPVPSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTN 129
Query: 187 YRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTA 366
+ V +V ++G Y V++IGT DG ++KAV++ + + ++ + + P+++
Sbjct: 130 FTH---LVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIE-ELQLFDQEPMRSL 185
Query: 367 VISEVQVL 390
V+S+ + L
Sbjct: 186 VLSQSKKL 193
>BC038411-1|AAH38411.1| 770|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 770
Score = 64.9 bits (151), Expect = 1e-10
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Frame = +1
Query: 19 LPLEKEKVPPTRPGSCVED---------SRNLTDSEVNFIKTHPLMDKAVPSFLARPVLI 171
LP+ VP RPG C+ + S +L D + FI+ HPLMD+ V P+L+
Sbjct: 369 LPVVDNDVPQPRPGECITNNMKLRHFGSSLSLPDRVLTFIRDHPLMDRPVFPADGHPLLV 428
Query: 172 RVSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFD 324
Y + H +V +++G +YDV+Y+GT+DG + +AV + + V +
Sbjct: 429 TTDTAYL--RVVAH-RVTSLSGKEYDVLYLGTEDGHLHRAVRIGAQLSVLE 476
>BC018361-1|AAH18361.1| 615|Homo sapiens SEMA4F protein protein.
Length = 615
Score = 64.9 bits (151), Expect = 1e-10
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Frame = +1
Query: 19 LPLEKEKVPPTRPGSCVED---------SRNLTDSEVNFIKTHPLMDKAVPSFLARPVLI 171
LP+ VP RPG C+ + S +L D + FI+ HPLMD+ V P+L+
Sbjct: 214 LPVVDNDVPQPRPGECITNNMKLRHFGSSLSLPDRVLTFIRDHPLMDRPVFPADGHPLLV 273
Query: 172 RVSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFD 324
Y + H +V +++G +YDV+Y+GT+DG + +AV + + V +
Sbjct: 274 TTDTAYL--RVVAH-RVTSLSGKEYDVLYLGTEDGHLHRAVRIGAQLSVLE 321
>BC017476-1|AAH17476.2| 645|Homo sapiens SEMA4C protein protein.
Length = 645
Score = 64.9 bits (151), Expect = 1e-10
Identities = 38/128 (29%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Frame = +1
Query: 34 EKVPPTRPGSCVED---------SRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQ 186
+ VP RPGSC+ + S L D+ +NF+K HPLM++ V +RP+L++
Sbjct: 172 DPVPSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTN 231
Query: 187 YRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTA 366
+ V +V ++G Y V++IGT DG ++KAV++ + + ++ + + P+++
Sbjct: 232 FTH---LVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIE-ELQLFDQEPMRSL 287
Query: 367 VISEVQVL 390
V+S+ + L
Sbjct: 288 VLSQSKKL 295
>AY358842-1|AAQ89201.1| 833|Homo sapiens SEMA4C protein.
Length = 833
Score = 64.9 bits (151), Expect = 1e-10
Identities = 38/128 (29%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Frame = +1
Query: 34 EKVPPTRPGSCVED---------SRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQ 186
+ VP RPGSC+ + S L D+ +NF+K HPLM++ V +RP+L++
Sbjct: 360 DPVPSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTN 419
Query: 187 YRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTA 366
+ V +V ++G Y V++IGT DG ++KAV++ + + ++ + + P+++
Sbjct: 420 FTH---LVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIE-ELQLFDQEPMRSL 475
Query: 367 VISEVQVL 390
V+S+ + L
Sbjct: 476 VLSQSKKL 483
>AL592424-4|CAI16377.1| 962|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 962
Score = 64.9 bits (151), Expect = 1e-10
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 10/110 (9%)
Frame = +1
Query: 16 WLPLEKEKVPPTRPGSCV--------EDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLI 171
W P+ +++VP RPGSC SR+L D + FIK HPL+D AVP +P+L
Sbjct: 357 WTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLT 416
Query: 172 RVSLQYRFSAIAVHPQVQAMNG--NKYDVMYIGTDDGRVIKAVNVASNEG 315
S A+ V M G + VM++G++DG V+K + G
Sbjct: 417 LTS-----RALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSG 461
>AL592424-3|CAI16378.1| 930|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 930
Score = 64.9 bits (151), Expect = 1e-10
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 10/110 (9%)
Frame = +1
Query: 16 WLPLEKEKVPPTRPGSCV--------EDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLI 171
W P+ +++VP RPGSC SR+L D + FIK HPL+D AVP +P+L
Sbjct: 357 WTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLT 416
Query: 172 RVSLQYRFSAIAVHPQVQAMNG--NKYDVMYIGTDDGRVIKAVNVASNEG 315
S A+ V M G + VM++G++DG V+K + G
Sbjct: 417 LTS-----RALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSG 461
>AL592424-2|CAI16376.1| 922|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 922
Score = 64.9 bits (151), Expect = 1e-10
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 10/110 (9%)
Frame = +1
Query: 16 WLPLEKEKVPPTRPGSCV--------EDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLI 171
W P+ +++VP RPGSC SR+L D + FIK HPL+D AVP +P+L
Sbjct: 317 WTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLT 376
Query: 172 RVSLQYRFSAIAVHPQVQAMNG--NKYDVMYIGTDDGRVIKAVNVASNEG 315
S A+ V M G + VM++G++DG V+K + G
Sbjct: 377 LTS-----RALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSG 421
>AK075384-1|BAC11584.1| 770|Homo sapiens protein ( Homo sapiens
cDNA PSEC0074 fis, clone NT2RP2003050, highly similar to
Mus musculus mRNA for semaphorin W. ).
Length = 770
Score = 64.9 bits (151), Expect = 1e-10
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Frame = +1
Query: 19 LPLEKEKVPPTRPGSCVED---------SRNLTDSEVNFIKTHPLMDKAVPSFLARPVLI 171
LP+ VP RPG C+ + S +L D + FI+ HPLMD+ V P+L+
Sbjct: 369 LPVVDNDVPQPRPGECITNNMKLRHFGSSLSLPDRVLTFIRDHPLMDRPVFPADGHPLLV 428
Query: 172 RVSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFD 324
Y + H +V +++G +YDV+Y+GT+DG + +AV + + V +
Sbjct: 429 TTDTAYL--RVVAH-RVTSLSGKEYDVLYLGTEDGHLHRAVRIGAQLSVLE 476
>AK021660-1|BAB13869.1| 367|Homo sapiens protein ( Homo sapiens
cDNA FLJ11598 fis, clone HEMBA1003866, moderately
similar to Mus musculus semaphorin VIa mRNA. ).
Length = 367
Score = 64.9 bits (151), Expect = 1e-10
Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 12/124 (9%)
Frame = +1
Query: 10 SNWLPLEKEKVPPTRPGSCVED--------SRNLTDSEVNFIKTHPLMDKAVPSFLARPV 165
S W + ++KVP RPG C + S + D ++FIK+HPLMD AVP P
Sbjct: 243 SVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPW 302
Query: 166 LIRVSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVAS----NEGVFDASV 333
+ ++YR +AI+V A Y V+++G++ G V+K + S N+ V +
Sbjct: 303 FTKTRVRYRLTAISV--DHSAGPYQNYTVIFVGSEAGMVLKVLAKTSPFSLNDSVLLEEI 360
Query: 334 EEYS 345
E Y+
Sbjct: 361 EAYN 364
>AF389426-1|AAM69449.1| 476|Homo sapiens semaphorin 6D short
isoform protein.
Length = 476
Score = 64.9 bits (151), Expect = 1e-10
Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 12/124 (9%)
Frame = +1
Query: 10 SNWLPLEKEKVPPTRPGSCVED--------SRNLTDSEVNFIKTHPLMDKAVPSFLARPV 165
S W + ++KVP RPG C + S + D ++FIK+HPLMD AVP P
Sbjct: 352 SVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPW 411
Query: 166 LIRVSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVAS----NEGVFDASV 333
+ ++YR +AI+V A Y V+++G++ G V+K + S N+ V +
Sbjct: 412 FTKTRVRYRLTAISV--DHSAGPYQNYTVIFVGSEAGMVLKVLAKTSPFSLNDSVLLEEI 469
Query: 334 EEYS 345
E Y+
Sbjct: 470 EAYN 473
>AF053369-1|AAF80660.1| 424|Homo sapiens semaphorin M protein.
Length = 424
Score = 64.9 bits (151), Expect = 1e-10
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Frame = +1
Query: 19 LPLEKEKVPPTRPGSCVED---------SRNLTDSEVNFIKTHPLMDKAVPSFLARPVLI 171
LP+ VP RPG C+ + S +L D + FI+ HPLMD+ V P+L+
Sbjct: 23 LPVVDNDVPQPRPGECITNNMKLRHFGSSLSLPDRVLTFIRDHPLMDRPVFPADGHPLLV 82
Query: 172 RVSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFD 324
Y + H +V +++G +YDV+Y+GT+DG + +AV + + V +
Sbjct: 83 TTDTAYL--RVVAH-RVTSLSGKEYDVLYLGTEDGHLHRAVRIGAQLSVLE 130
>AC092636-5|AAY14967.1| 510|Homo sapiens unknown protein.
Length = 510
Score = 64.9 bits (151), Expect = 1e-10
Identities = 38/128 (29%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Frame = +1
Query: 34 EKVPPTRPGSCVED---------SRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQ 186
+ VP RPGSC+ + S L D+ +NF+K HPLM++ V +RP+L++
Sbjct: 37 DPVPSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTN 96
Query: 187 YRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTA 366
+ V +V ++G Y V++IGT DG ++KAV++ + + ++ + + P+++
Sbjct: 97 FTH---LVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIE-ELQLFDQEPMRSL 152
Query: 367 VISEVQVL 390
V+S+ + L
Sbjct: 153 VLSQSKKL 160
>AB058772-1|BAB47498.1| 935|Homo sapiens KIAA1869 protein protein.
Length = 935
Score = 64.9 bits (151), Expect = 1e-10
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 10/110 (9%)
Frame = +1
Query: 16 WLPLEKEKVPPTRPGSCV--------EDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLI 171
W P+ +++VP RPGSC SR+L D + FIK HPL+D AVP +P+L
Sbjct: 362 WTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLT 421
Query: 172 RVSLQYRFSAIAVHPQVQAMNG--NKYDVMYIGTDDGRVIKAVNVASNEG 315
S A+ V M G + VM++G++DG V+K + G
Sbjct: 422 LTS-----RALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSG 466
>AB051526-1|BAB21830.1| 963|Homo sapiens KIAA1739 protein protein.
Length = 963
Score = 64.9 bits (151), Expect = 1e-10
Identities = 38/128 (29%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Frame = +1
Query: 34 EKVPPTRPGSCVED---------SRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQ 186
+ VP RPGSC+ + S L D+ +NF+K HPLM++ V +RP+L++
Sbjct: 490 DPVPSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTN 549
Query: 187 YRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTA 366
+ V +V ++G Y V++IGT DG ++KAV++ + + ++ + + P+++
Sbjct: 550 FTH---LVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIE-ELQLFDQEPMRSL 605
Query: 367 VISEVQVL 390
V+S+ + L
Sbjct: 606 VLSQSKKL 613
>AB022434-1|BAB20670.1| 930|Homo sapiens semaphorin Y protein.
Length = 930
Score = 64.9 bits (151), Expect = 1e-10
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 10/110 (9%)
Frame = +1
Query: 16 WLPLEKEKVPPTRPGSCV--------EDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLI 171
W P+ +++VP RPGSC SR+L D + FIK HPL+D AVP +P+L
Sbjct: 357 WTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLT 416
Query: 172 RVSLQYRFSAIAVHPQVQAMNG--NKYDVMYIGTDDGRVIKAVNVASNEG 315
S A+ V M G + VM++G++DG V+K + G
Sbjct: 417 LTS-----RALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSG 461
>AB022317-1|BAA75631.1| 615|Homo sapiens semaphorin W protein.
Length = 615
Score = 64.9 bits (151), Expect = 1e-10
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Frame = +1
Query: 19 LPLEKEKVPPTRPGSCVED---------SRNLTDSEVNFIKTHPLMDKAVPSFLARPVLI 171
LP+ VP RPG C+ + S +L D + FI+ HPLMD+ V P+L+
Sbjct: 214 LPVVDNDVPQPRPGECITNNMKLRHFGSSLSLPDRVLTFIRDHPLMDRPVFPADGHPLLV 273
Query: 172 RVSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFD 324
Y + H +V +++G +YDV+Y+GT+DG + +AV + + V +
Sbjct: 274 TTDTAYL--RVVAH-RVTSLSGKEYDVLYLGTEDGHLHRAVRIGAQLSVLE 321
>AF339154-1|AAL72100.1| 962|Homo sapiens semaphorin Y protein.
Length = 962
Score = 64.1 bits (149), Expect = 3e-10
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 10/110 (9%)
Frame = +1
Query: 16 WLPLEKEKVPPTRPGSCV--------EDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLI 171
W P+ +++VP RPGSC SR+L D + FIK HPL+D AVP +P+L
Sbjct: 357 WTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLT 416
Query: 172 RVSLQYRFSAIAVHPQVQAMNG--NKYDVMYIGTDDGRVIKAVNVASNEG 315
S A+ V M G + VM++G++DG V+K + G
Sbjct: 417 LTS-----RALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLPPGGRSG 461
>AF339153-1|AAL72099.1| 922|Homo sapiens semaphorin Y short isoform
2 protein.
Length = 922
Score = 64.1 bits (149), Expect = 3e-10
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 10/110 (9%)
Frame = +1
Query: 16 WLPLEKEKVPPTRPGSCV--------EDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLI 171
W P+ +++VP RPGSC SR+L D + FIK HPL+D AVP +P+L
Sbjct: 317 WTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLT 376
Query: 172 RVSLQYRFSAIAVHPQVQAMNG--NKYDVMYIGTDDGRVIKAVNVASNEG 315
S A+ V M G + VM++G++DG V+K + G
Sbjct: 377 LTS-----RALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLPPGGRSG 421
>AF339152-1|AAL72098.1| 930|Homo sapiens semaphorin Y short isoform
1 protein.
Length = 930
Score = 64.1 bits (149), Expect = 3e-10
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 10/110 (9%)
Frame = +1
Query: 16 WLPLEKEKVPPTRPGSCV--------EDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLI 171
W P+ +++VP RPGSC SR+L D + FIK HPL+D AVP +P+L
Sbjct: 357 WTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLT 416
Query: 172 RVSLQYRFSAIAVHPQVQAMNG--NKYDVMYIGTDDGRVIKAVNVASNEG 315
S A+ V M G + VM++G++DG V+K + G
Sbjct: 417 LTS-----RALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLPPGGRSG 461
>AK000376-1|BAA91124.1| 510|Homo sapiens protein ( Homo sapiens
cDNA FLJ20369 fis, clone HEP19364. ).
Length = 510
Score = 62.1 bits (144), Expect = 1e-09
Identities = 37/128 (28%), Positives = 71/128 (55%), Gaps = 9/128 (7%)
Frame = +1
Query: 34 EKVPPTRPGSCVED---------SRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQ 186
+ VP RPGSC+ + S L D+ +NF+K HPLM++ V +RP+L++
Sbjct: 37 DPVPSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTN 96
Query: 187 YRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTA 366
+ V +V ++G Y V++I T DG ++KAV++ + + ++ + + P+++
Sbjct: 97 FTH---LVADRVTGLDGATYTVLFIDTGDGWLLKAVSLGPWVHLIE-ELQLFDQEPMRSL 152
Query: 367 VISEVQVL 390
V+S+ + L
Sbjct: 153 VLSQSKKL 160
>BC099724-1|AAH99724.1| 782|Homo sapiens sema domain,
immunoglobulin domain (Ig), short basic domain,
secreted, (semapho protein.
Length = 782
Score = 59.7 bits (138), Expect = 5e-09
Identities = 43/147 (29%), Positives = 71/147 (48%)
Frame = +1
Query: 52 RPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYRFSAIAVHPQVQAM 231
+PG +++ D + F + HPLM V RPVL++ L + I V +V+A
Sbjct: 389 QPGRPFGSTKDYPDEVLQFARAHPLMFWPVRPRHGRPVLVKTHLAQQLHQIVV-DRVEAE 447
Query: 232 NGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVISEVQVLPPGVPIK 411
+G YDV+++GTD G V+K + + + A EE V+ E+QV PI
Sbjct: 448 DGT-YDVIFLGTDSGSVLKVIALQAGG---SAEPEE--------VVLEELQVFKVPTPIT 495
Query: 412 QMHVALTTEKLIVASGDIIKAVTLSHC 492
+M +++ + L V S + + L C
Sbjct: 496 EMEISVKRQMLYVGSRLGVAQLRLHQC 522
>BC098137-1|AAH98137.1| 782|Homo sapiens sema domain,
immunoglobulin domain (Ig), short basic domain,
secreted, (semapho protein.
Length = 782
Score = 59.7 bits (138), Expect = 5e-09
Identities = 43/147 (29%), Positives = 71/147 (48%)
Frame = +1
Query: 52 RPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYRFSAIAVHPQVQAM 231
+PG +++ D + F + HPLM V RPVL++ L + I V +V+A
Sbjct: 389 QPGRPFGSTKDYPDEVLQFARAHPLMFWPVRPRHGRPVLVKTHLAQQLHQIVV-DRVEAE 447
Query: 232 NGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVISEVQVLPPGVPIK 411
+G YDV+++GTD G V+K + + + A EE V+ E+QV PI
Sbjct: 448 DGT-YDVIFLGTDSGSVLKVIALQAGG---SAEPEE--------VVLEELQVFKVPTPIT 495
Query: 412 QMHVALTTEKLIVASGDIIKAVTLSHC 492
+M +++ + L V S + + L C
Sbjct: 496 EMEISVKRQMLYVGSRLGVAQLRLHQC 522
>BC098104-1|AAH98104.1| 782|Homo sapiens semaphorin sem2 protein.
Length = 782
Score = 59.7 bits (138), Expect = 5e-09
Identities = 43/147 (29%), Positives = 71/147 (48%)
Frame = +1
Query: 52 RPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYRFSAIAVHPQVQAM 231
+PG +++ D + F + HPLM V RPVL++ L + I V +V+A
Sbjct: 389 QPGRPFGSTKDYPDEVLQFARAHPLMFWPVRPRHGRPVLVKTHLAQQLHQIVV-DRVEAE 447
Query: 232 NGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVISEVQVLPPGVPIK 411
+G YDV+++GTD G V+K + + + A EE V+ E+QV PI
Sbjct: 448 DGT-YDVIFLGTDSGSVLKVIALQAGG---SAEPEE--------VVLEELQVFKVPTPIT 495
Query: 412 QMHVALTTEKLIVASGDIIKAVTLSHC 492
+M +++ + L V S + + L C
Sbjct: 496 EMEISVKRQMLYVGSRLGVAQLRLHQC 522
>AK024425-1|BAB15715.1| 725|Homo sapiens FLJ00014 protein protein.
Length = 725
Score = 59.7 bits (138), Expect = 5e-09
Identities = 43/147 (29%), Positives = 71/147 (48%)
Frame = +1
Query: 52 RPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYRFSAIAVHPQVQAM 231
+PG +++ D + F + HPLM V RPVL++ L + I V +V+A
Sbjct: 332 QPGRPFGSTKDYPDEVLQFARAHPLMFWPVRPRHGRPVLVKTHLAQQLHQIVV-DRVEAE 390
Query: 232 NGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVISEVQVLPPGVPIK 411
+G YDV+++GTD G V+K + + + A EE V+ E+QV PI
Sbjct: 391 DGT-YDVIFLGTDSGSVLKVIALQAGG---SAEPEE--------VVLEELQVFKVPTPIT 438
Query: 412 QMHVALTTEKLIVASGDIIKAVTLSHC 492
+M +++ + L V S + + L C
Sbjct: 439 EMEISVKRQMLYVGSRLGVAQLRLHQC 465
>AB029496-1|BAA98132.1| 782|Homo sapiens semaphorin sem2 protein.
Length = 782
Score = 59.7 bits (138), Expect = 5e-09
Identities = 43/147 (29%), Positives = 71/147 (48%)
Frame = +1
Query: 52 RPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYRFSAIAVHPQVQAM 231
+PG +++ D + F + HPLM V RPVL++ L + I V +V+A
Sbjct: 389 QPGRPFGSTKDYPDEVLQFARAHPLMFWPVRPRHGRPVLVKTHLAQQLHQIVV-DRVEAE 447
Query: 232 NGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVISEVQVLPPGVPIK 411
+G YDV+++GTD G V+K + + + A EE V+ E+QV PI
Sbjct: 448 DGT-YDVIFLGTDSGSVLKVIALQAGG---SAEPEE--------VVLEELQVFKVPTPIT 495
Query: 412 QMHVALTTEKLIVASGDIIKAVTLSHC 492
+M +++ + L V S + + L C
Sbjct: 496 EMEISVKRQMLYVGSRLGVAQLRLHQC 522
>BC128579-1|AAI28580.1| 702|Homo sapiens SEMA4G protein protein.
Length = 702
Score = 58.4 bits (135), Expect = 1e-08
Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Frame = +1
Query: 40 VPPTRPGSCVEDS---------RNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYR 192
VP RPGSC+ DS ++L ++F+K HPLM + V RP+L++ ++ R
Sbjct: 369 VPEPRPGSCITDSLRSQGYNSSQDLPSLVLDFVKLHPLMARPVVPTRGRPLLLKRNI--R 426
Query: 193 FSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVI 372
++ + P V G YD++++GT DG + KAV + S + + + V+ VI
Sbjct: 427 YTHLTGTP-VTTPAGPTYDLLFLGTADGWIHKAVVLGSGMHIIEETQVFRESQSVENLVI 485
Query: 373 SEVQ 384
S +Q
Sbjct: 486 SLLQ 489
>BC110382-1|AAI10383.1| 843|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 843
Score = 58.4 bits (135), Expect = 1e-08
Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Frame = +1
Query: 40 VPPTRPGSCVEDS---------RNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYR 192
VP RPGSC+ DS ++L ++F+K HPLM + V RP+L++ ++ R
Sbjct: 369 VPEPRPGSCITDSLRSQGYNSSQDLPSLVLDFVKLHPLMARPVVPTRGRPLLLKRNI--R 426
Query: 193 FSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVI 372
++ + P V G YD++++GT DG + KAV + S + + + V+ VI
Sbjct: 427 YTHLTGTP-VTTPAGPTYDLLFLGTADGWIHKAVVLGSGMHIIEETQVFRESQSVENLVI 485
Query: 373 SEVQ 384
S +Q
Sbjct: 486 SLLQ 489
>BC051030-1|AAH51030.1| 838|Homo sapiens SEMA4G protein protein.
Length = 838
Score = 58.4 bits (135), Expect = 1e-08
Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Frame = +1
Query: 40 VPPTRPGSCVEDS---------RNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYR 192
VP RPGSC+ DS ++L ++F+K HPLM + V RP+L++ ++ R
Sbjct: 369 VPEPRPGSCITDSLRSQGYNSSQDLPSLVLDFVKLHPLMARPVVPTRGRPLLLKRNI--R 426
Query: 193 FSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVI 372
++ + P V G YD++++GT DG + KAV + S + + + V+ VI
Sbjct: 427 YTHLTGTP-VTTPAGPTYDLLFLGTADGWIHKAVVLGSGMHIIEETQVFRESQSVENLVI 485
Query: 373 SEVQ 384
S +Q
Sbjct: 486 SLLQ 489
>AL133215-2|CAI10916.1| 843|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 843
Score = 58.4 bits (135), Expect = 1e-08
Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Frame = +1
Query: 40 VPPTRPGSCVEDS---------RNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYR 192
VP RPGSC+ DS ++L ++F+K HPLM + V RP+L++ ++ R
Sbjct: 369 VPEPRPGSCITDSLRSQGYNSSQDLPSLVLDFVKLHPLMARPVVPTRGRPLLLKRNI--R 426
Query: 193 FSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVI 372
++ + P V G YD++++GT DG + KAV + S + + + V+ VI
Sbjct: 427 YTHLTGTP-VTTPAGPTYDLLFLGTADGWIHKAVVLGSGMHIIEETQVFRESQSVENLVI 485
Query: 373 SEVQ 384
S +Q
Sbjct: 486 SLLQ 489
>AL133215-1|CAB92805.1| 838|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 838
Score = 58.4 bits (135), Expect = 1e-08
Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Frame = +1
Query: 40 VPPTRPGSCVEDS---------RNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYR 192
VP RPGSC+ DS ++L ++F+K HPLM + V RP+L++ ++ R
Sbjct: 369 VPEPRPGSCITDSLRSQGYNSSQDLPSLVLDFVKLHPLMARPVVPTRGRPLLLKRNI--R 426
Query: 193 FSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVI 372
++ + P V G YD++++GT DG + KAV + S + + + V+ VI
Sbjct: 427 YTHLTGTP-VTTPAGPTYDLLFLGTADGWIHKAVVLGSGMHIIEETQVFRESQSVENLVI 485
Query: 373 SEVQ 384
S +Q
Sbjct: 486 SLLQ 489
>AB046839-1|BAB13445.1| 869|Homo sapiens KIAA1619 protein protein.
Length = 869
Score = 58.4 bits (135), Expect = 1e-08
Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Frame = +1
Query: 40 VPPTRPGSCVEDS---------RNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYR 192
VP RPGSC+ DS ++L ++F+K HPLM + V RP+L++ ++ R
Sbjct: 395 VPEPRPGSCITDSLRSQGYNSSQDLPSLVLDFVKLHPLMARPVVPTRGRPLLLKRNI--R 452
Query: 193 FSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVI 372
++ + P V G YD++++GT DG + KAV + S + + + V+ VI
Sbjct: 453 YTHLTGTP-VTTPAGPTYDLLFLGTADGWIHKAVVLGSGMHIIEETQVFRESQSVENLVI 511
Query: 373 SEVQ 384
S +Q
Sbjct: 512 SLLQ 515
>BX537671-1|CAD97806.1| 681|Homo sapiens hypothetical protein
protein.
Length = 681
Score = 55.6 bits (128), Expect = 9e-08
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
Frame = +1
Query: 40 VPPTRPGSCVEDSRN---------LTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYR 192
VP RPG+C+ +S L D +NF+K H LMD V S R +L++ Q R
Sbjct: 235 VPTPRPGACITNSARERKINSSLQLPDRVLNFLKDHFLMDGQVRS---RMLLLQP--QAR 289
Query: 193 FSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVI 372
+ +AVH +V ++ + YDV+++GT DGR+ KAV+V + + S PV+ ++
Sbjct: 290 YQRVAVH-RVPGLH-HTYDVLFLGTGDGRLHKAVSVGPRVHIIEELQIFSSGQPVQNLLL 347
>BC126438-1|AAI26439.1| 837|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 837
Score = 55.6 bits (128), Expect = 9e-08
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
Frame = +1
Query: 40 VPPTRPGSCVEDSRN---------LTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYR 192
VP RPG+C+ +S L D +NF+K H LMD V S R +L++ Q R
Sbjct: 391 VPTPRPGACITNSARERKINSSLQLPDRVLNFLKDHFLMDGQVRS---RMLLLQP--QAR 445
Query: 193 FSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVI 372
+ +AVH +V ++ + YDV+++GT DGR+ KAV+V + + S PV+ ++
Sbjct: 446 YQRVAVH-RVPGLH-HTYDVLFLGTGDGRLHKAVSVGPRVHIIEELQIFSSGQPVQNLLL 503
>BC110853-1|AAI10854.1| 837|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 837
Score = 55.6 bits (128), Expect = 9e-08
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
Frame = +1
Query: 40 VPPTRPGSCVEDSRN---------LTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYR 192
VP RPG+C+ +S L D +NF+K H LMD V S R +L++ Q R
Sbjct: 391 VPTPRPGACITNSARERKINSSLQLPDRVLNFLKDHFLMDGQVRS---RMLLLQP--QAR 445
Query: 193 FSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVI 372
+ +AVH +V ++ + YDV+++GT DGR+ KAV+V + + S PV+ ++
Sbjct: 446 YQRVAVH-RVPGLH-HTYDVLFLGTGDGRLHKAVSVGPRVHIIEELQIFSSGQPVQNLLL 503
>BC094849-1|AAH94849.1| 521|Homo sapiens SEMA4B protein protein.
Length = 521
Score = 55.6 bits (128), Expect = 9e-08
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
Frame = +1
Query: 40 VPPTRPGSCVEDSRN---------LTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYR 192
VP RPG+C+ +S L D +NF+K H LMD V S R +L++ Q R
Sbjct: 75 VPTPRPGACITNSARERKINSSLQLPDRVLNFLKDHFLMDGQVRS---RMLLLQP--QAR 129
Query: 193 FSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVI 372
+ +AVH +V ++ + YDV+++GT DGR+ KAV+V + + S PV+ ++
Sbjct: 130 YQRVAVH-RVPGLH-HTYDVLFLGTGDGRLHKAVSVGPRVHIIEELQIFSSGQPVQNLLL 187
>BC017658-1|AAH17658.1| 458|Homo sapiens SEMA4B protein protein.
Length = 458
Score = 55.6 bits (128), Expect = 9e-08
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
Frame = +1
Query: 40 VPPTRPGSCVEDSRN---------LTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYR 192
VP RPG+C+ +S L D +NF+K H LMD V S R +L++ Q R
Sbjct: 12 VPTPRPGACITNSARERKINSSLQLPDRVLNFLKDHFLMDGQVRS---RMLLLQP--QAR 66
Query: 193 FSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVI 372
+ +AVH +V ++ + YDV+++GT DGR+ KAV+V + + S PV+ ++
Sbjct: 67 YQRVAVH-RVPGLH-HTYDVLFLGTGDGRLHKAVSVGPRVHIIEELQIFSSGQPVQNLLL 124
>BC010701-1|AAH10701.2| 530|Homo sapiens SEMA4B protein protein.
Length = 530
Score = 55.6 bits (128), Expect = 9e-08
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
Frame = +1
Query: 40 VPPTRPGSCVEDSRN---------LTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYR 192
VP RPG+C+ +S L D +NF+K H LMD V S R +L++ Q R
Sbjct: 84 VPTPRPGACITNSARERKINSSLQLPDRVLNFLKDHFLMDGQVRS---RMLLLQP--QAR 138
Query: 193 FSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVI 372
+ +AVH +V ++ + YDV+++GT DGR+ KAV+V + + S PV+ ++
Sbjct: 139 YQRVAVH-RVPGLH-HTYDVLFLGTGDGRLHKAVSVGPRVHIIEELQIFSSGQPVQNLLL 196
>AY445887-1|AAR15707.1| 837|Homo sapiens semaphorin 4b precursor
protein.
Length = 837
Score = 55.6 bits (128), Expect = 9e-08
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
Frame = +1
Query: 40 VPPTRPGSCVEDSRN---------LTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYR 192
VP RPG+C+ +S L D +NF+K H LMD V S R +L++ Q R
Sbjct: 391 VPTPRPGACITNSARERKINSSLQLPDRVLNFLKDHFLMDGQVRS---RMLLLQP--QAR 445
Query: 193 FSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVI 372
+ +AVH +V ++ + YDV+++GT DGR+ KAV+V + + S PV+ ++
Sbjct: 446 YQRVAVH-RVPGLH-HTYDVLFLGTGDGRLHKAVSVGPRVHIIEELQIFSSGQPVQNLLL 503
>AY358392-1|AAQ88758.1| 837|Homo sapiens semaphorin C protein.
Length = 837
Score = 55.6 bits (128), Expect = 9e-08
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
Frame = +1
Query: 40 VPPTRPGSCVEDSRN---------LTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYR 192
VP RPG+C+ +S L D +NF+K H LMD V S R +L++ Q R
Sbjct: 391 VPTPRPGACITNSARERKINSSLQLPDRVLNFLKDHFLMDGQVRS---RMLLLQP--QAR 445
Query: 193 FSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVI 372
+ +AVH +V ++ + YDV+++GT DGR+ KAV+V + + S PV+ ++
Sbjct: 446 YQRVAVH-RVPGLH-HTYDVLFLGTGDGRLHKAVSVGPRVHIIEELQIFSSGQPVQNLLL 503
>AL390081-1|CAB98205.1| 673|Homo sapiens SEMA4B, Semaphorin 4B
protein.
Length = 673
Score = 55.6 bits (128), Expect = 9e-08
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
Frame = +1
Query: 40 VPPTRPGSCVEDSRN---------LTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYR 192
VP RPG+C+ +S L D +NF+K H LMD V S R +L++ Q R
Sbjct: 227 VPTPRPGACITNSARERKINSSLQLPDRVLNFLKDHFLMDGQVRS---RMLLLQP--QAR 281
Query: 193 FSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVI 372
+ +AVH +V ++ + YDV+++GT DGR+ KAV+V + + S PV+ ++
Sbjct: 282 YQRVAVH-RVPGLH-HTYDVLFLGTGDGRLHKAVSVGPRVHIIEELQIFSSGQPVQNLLL 339
>AK026133-1|BAB15372.1| 380|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22480 fis, clone HRC10841. ).
Length = 380
Score = 55.6 bits (128), Expect = 9e-08
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
Frame = +1
Query: 40 VPPTRPGSCVEDSRN---------LTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYR 192
VP RPG+C+ +S L D +NF+K H LMD V S R +L++ Q R
Sbjct: 29 VPTPRPGACITNSARERKINSSLQLPDRVLNFLKDHFLMDGQVRS---RMLLLQP--QAR 83
Query: 193 FSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVI 372
+ +AVH +V ++ + YDV+++GT DGR+ KAV+V + + S PV+ ++
Sbjct: 84 YQRVAVH-RVPGLH-HTYDVLFLGTGDGRLHKAVSVGPRVHIIEELQIFSSGQPVQNLLL 141
>AB051532-1|BAB21836.1| 893|Homo sapiens KIAA1745 protein protein.
Length = 893
Score = 55.6 bits (128), Expect = 9e-08
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
Frame = +1
Query: 40 VPPTRPGSCVEDSRN---------LTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYR 192
VP RPG+C+ +S L D +NF+K H LMD V S R +L++ Q R
Sbjct: 447 VPTPRPGACITNSARERKINSSLQLPDRVLNFLKDHFLMDGQVRS---RMLLLQP--QAR 501
Query: 193 FSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAVI 372
+ +AVH +V ++ + YDV+++GT DGR+ KAV+V + + S PV+ ++
Sbjct: 502 YQRVAVH-RVPGLH-HTYDVLFLGTGDGRLHKAVSVGPRVHIIEELQIFSSGQPVQNLLL 559
>AB209278-1|BAD92515.1| 518|Homo sapiens semaphorin 6B isoform 3
precursor variant protein.
Length = 518
Score = 53.6 bits (123), Expect = 4e-07
Identities = 30/89 (33%), Positives = 51/89 (57%)
Frame = +1
Query: 22 PLEKEKVPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQYRFSA 201
PL + +VP + + L D +NF+KTHPLMD+AVPS P ++R ++++ +
Sbjct: 2 PLPRAEVPRVHLDAGASSA--LPDDILNFVKTHPLMDEAVPSLGHAPWILRTLMRHQLTR 59
Query: 202 IAVHPQVQAMNGNKYDVMYIGTDDGRVIK 288
+AV V A V+++G++ G V+K
Sbjct: 60 VAV--DVGAGPWGNQTVVFLGSEAGTVLK 86
>BC077726-1|AAH77726.1| 1151|Homo sapiens sema domain, seven
thrombospondin repeats (type 1 and type 1-like),
transmembra protein.
Length = 1151
Score = 48.8 bits (111), Expect = 1e-05
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 4/163 (2%)
Frame = +1
Query: 16 WLPLEKEKVPPTRPGSCVED--SRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQY 189
WLP+ +P + G+ E + NLT+ + + LM +AV P + + S+
Sbjct: 413 WLPIANP-IPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQPVTPEPCVTQDSV-- 469
Query: 190 RFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAV 369
RFS + V VQA + Y V+YIGT+ G ++KA++ AS +
Sbjct: 470 RFSHLVVD-LVQAKD-TLYHVLYIGTESGTILKALSTASRS--------------LHGCY 513
Query: 370 ISEVQVLPPG--VPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
+ E+ VLPPG P++ + + + L V D + V L C
Sbjct: 514 LEELHVLPPGRREPLRSLRILHSARALFVGLRDGVLRVPLERC 556
>AY358124-1|AAQ88491.1| 1092|Homo sapiens SEMA5B protein.
Length = 1092
Score = 48.8 bits (111), Expect = 1e-05
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 4/163 (2%)
Frame = +1
Query: 16 WLPLEKEKVPPTRPGSCVED--SRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQY 189
WLP+ +P + G+ E + NLT+ + + LM +AV P + + S+
Sbjct: 413 WLPIANP-IPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQPVTPEPCVTQDSV-- 469
Query: 190 RFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAV 369
RFS + V VQA + Y V+YIGT+ G ++KA++ AS +
Sbjct: 470 RFSHLVVD-LVQAKD-TLYHVLYIGTESGTILKALSTASRS--------------LHGCY 513
Query: 370 ISEVQVLPPG--VPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
+ E+ VLPPG P++ + + + L V D + V L C
Sbjct: 514 LEELHVLPPGRREPLRSLRILHSARALFVGLRDGVLRVPLERC 556
>AB040878-1|BAA95969.1| 1202|Homo sapiens KIAA1445 protein protein.
Length = 1202
Score = 48.8 bits (111), Expect = 1e-05
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 4/163 (2%)
Frame = +1
Query: 16 WLPLEKEKVPPTRPGSCVED--SRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQY 189
WLP+ +P + G+ E + NLT+ + + LM +AV P + + S+
Sbjct: 464 WLPIANP-IPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQPVTPEPCVTQDSV-- 520
Query: 190 RFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAV 369
RFS + V VQA + Y V+YIGT+ G ++KA++ AS +
Sbjct: 521 RFSHLVVD-LVQAKD-TLYHVLYIGTESGTILKALSTASRS--------------LHGCY 564
Query: 370 ISEVQVLPPG--VPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
+ E+ VLPPG P++ + + + L V D + V L C
Sbjct: 565 LEELHVLPPGRREPLRSLRILHSARALFVGLRDGVLRVPLERC 607
>BC020974-1|AAH20974.1| 761|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 761
Score = 48.4 bits (110), Expect = 1e-05
Identities = 43/161 (26%), Positives = 75/161 (46%)
Frame = +1
Query: 10 SNWLPLEKEKVPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQY 189
S W + P RPGSC + D + F+K H LMD+ V + P+L++ ++Y
Sbjct: 362 SRWTTYRGPETNP-RPGSCSVGPSS--DKALTFMKDHFLMDEQV---VGTPLLVKSGVEY 415
Query: 190 RFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAV 369
A+ Q ++G+ + VMY+GT G + KAV V+ D+S +
Sbjct: 416 TRLAVET---AQGLDGHSHLVMYLGTTTGSLHKAV-VSG-----DSSAH----------L 456
Query: 370 ISEVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
+ E+Q+ P P++ + +A T + V + V ++C
Sbjct: 457 VEEIQLFPDPEPVRNLQLAPTQGAVFVGFSGGVWRVPRANC 497
>AY358531-1|AAQ88895.1| 761|Homo sapiens semaphorin B protein.
Length = 761
Score = 48.4 bits (110), Expect = 1e-05
Identities = 43/161 (26%), Positives = 75/161 (46%)
Frame = +1
Query: 10 SNWLPLEKEKVPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQY 189
S W + P RPGSC + D + F+K H LMD+ V + P+L++ ++Y
Sbjct: 362 SRWTTYRGPETNP-RPGSCSVGPSS--DKALTFMKDHFLMDEQV---VGTPLLVKSGVEY 415
Query: 190 RFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAV 369
A+ Q ++G+ + VMY+GT G + KAV V+ D+S +
Sbjct: 416 TRLAVET---AQGLDGHSHLVMYLGTTTGSLHKAV-VSG-----DSSAH----------L 456
Query: 370 ISEVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
+ E+Q+ P P++ + +A T + V + V ++C
Sbjct: 457 VEEIQLFPDPEPVRNLQLAPTQGAVFVGFSGGVWRVPRANC 497
>AL135927-14|CAI15533.1| 629|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 629
Score = 48.4 bits (110), Expect = 1e-05
Identities = 43/161 (26%), Positives = 75/161 (46%)
Frame = +1
Query: 10 SNWLPLEKEKVPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQY 189
S W + P RPGSC + D + F+K H LMD+ V + P+L++ ++Y
Sbjct: 230 SRWTTYRGPETNP-RPGSCSVGPSS--DKALTFMKDHFLMDEQV---VGTPLLVKSGVEY 283
Query: 190 RFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAV 369
A+ Q ++G+ + VMY+GT G + KAV V+ D+S +
Sbjct: 284 TRLAVET---AQGLDGHSHLVMYLGTTTGSLHKAV-VSG-----DSSAH----------L 324
Query: 370 ISEVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
+ E+Q+ P P++ + +A T + V + V ++C
Sbjct: 325 VEEIQLFPDPEPVRNLQLAPTQGAVFVGFSGGVWRVPRANC 365
>AL135927-12|CAI15531.1| 723|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 723
Score = 48.4 bits (110), Expect = 1e-05
Identities = 43/161 (26%), Positives = 75/161 (46%)
Frame = +1
Query: 10 SNWLPLEKEKVPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQY 189
S W + P RPGSC + D + F+K H LMD+ V + P+L++ ++Y
Sbjct: 324 SRWTTYRGPETNP-RPGSCSVGPSS--DKALTFMKDHFLMDEQV---VGTPLLVKSGVEY 377
Query: 190 RFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAV 369
A+ Q ++G+ + VMY+GT G + KAV V+ D+S +
Sbjct: 378 TRLAVET---AQGLDGHSHLVMYLGTTTGSLHKAV-VSG-----DSSAH----------L 418
Query: 370 ISEVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
+ E+Q+ P P++ + +A T + V + V ++C
Sbjct: 419 VEEIQLFPDPEPVRNLQLAPTQGAVFVGFSGGVWRVPRANC 459
>AL135927-11|CAI15530.1| 761|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 761
Score = 48.4 bits (110), Expect = 1e-05
Identities = 43/161 (26%), Positives = 75/161 (46%)
Frame = +1
Query: 10 SNWLPLEKEKVPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQY 189
S W + P RPGSC + D + F+K H LMD+ V + P+L++ ++Y
Sbjct: 362 SRWTTYRGPETNP-RPGSCSVGPSS--DKALTFMKDHFLMDEQV---VGTPLLVKSGVEY 415
Query: 190 RFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAV 369
A+ Q ++G+ + VMY+GT G + KAV V+ D+S +
Sbjct: 416 TRLAVET---AQGLDGHSHLVMYLGTTTGSLHKAV-VSG-----DSSAH----------L 456
Query: 370 ISEVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
+ E+Q+ P P++ + +A T + V + V ++C
Sbjct: 457 VEEIQLFPDPEPVRNLQLAPTQGAVFVGFSGGVWRVPRANC 497
>AB029394-1|BAB20087.1| 762|Homo sapiens SEMB protein.
Length = 762
Score = 48.4 bits (110), Expect = 1e-05
Identities = 43/161 (26%), Positives = 75/161 (46%)
Frame = +1
Query: 10 SNWLPLEKEKVPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPSFLARPVLIRVSLQY 189
S W + P RPGSC + D + F+K H LMD+ V + P+L++ ++Y
Sbjct: 363 SRWTTYRGPETNP-RPGSCSVGPSS--DKALTFMKDHFLMDEQV---VGTPLLVKSGVEY 416
Query: 190 RFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKNPVKTAV 369
A+ Q ++G+ + VMY+GT G + KAV V+ D+S +
Sbjct: 417 TRLAVET---AQGLDGHSHLVMYLGTTTGSLHKAV-VSG-----DSSAH----------L 457
Query: 370 ISEVQVLPPGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 492
+ E+Q+ P P++ + +A T + V + V ++C
Sbjct: 458 VEEIQLFPDPEPVRNLQLAPTQGAVFVGFSGGVWRVPRANC 498
>BC101647-1|AAI01648.1| 666|Homo sapiens semaphorin 7A, GPI
membrane anchor (John Milton Hagen blood group) protein.
Length = 666
Score = 45.6 bits (103), Expect = 9e-05
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +1
Query: 40 VPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPSF--LARPVLIRVSLQYRFSAIAVH 213
+P RPG C+ D + + HP + + V L P+ +Y + +AVH
Sbjct: 358 LPNPRPGKCLPDQQPIPTETFQVADRHPEVAQRVEPMGPLKTPLF---HSKYHYQKVAVH 414
Query: 214 PQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEE 339
++QA +G + V+Y+ TD G + K V E F ++ E
Sbjct: 415 -RMQASHGETFHVLYLTTDRGTIHKVVEPGEQEHSFAFNIME 455
>BC101643-1|AAI01644.1| 666|Homo sapiens semaphorin 7A, GPI
membrane anchor (John Milton Hagen blood group) protein.
Length = 666
Score = 45.6 bits (103), Expect = 9e-05
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +1
Query: 40 VPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPSF--LARPVLIRVSLQYRFSAIAVH 213
+P RPG C+ D + + HP + + V L P+ +Y + +AVH
Sbjct: 358 LPNPRPGKCLPDQQPIPTETFQVADRHPEVAQRVEPMGPLKTPLF---HSKYHYQKVAVH 414
Query: 214 PQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEE 339
++QA +G + V+Y+ TD G + K V E F ++ E
Sbjct: 415 -RMQASHGETFHVLYLTTDRGTIHKVVEPGEQEHSFAFNIME 455
>AY885237-1|AAW62253.1| 666|Homo sapiens sema domain,
immunoglobulin domain (Ig), and GPI membrane anchor,
(semaphorin) protein.
Length = 666
Score = 45.6 bits (103), Expect = 9e-05
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +1
Query: 40 VPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPSF--LARPVLIRVSLQYRFSAIAVH 213
+P RPG C+ D + + HP + + V L P+ +Y + +AVH
Sbjct: 358 LPNPRPGKCLPDQQPIPTETFQVADRHPEVAQRVEPMGPLKTPLF---HSKYHYQKVAVH 414
Query: 214 PQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEE 339
++QA +G + V+Y+ TD G + K V E F ++ E
Sbjct: 415 -RMQASHGETFHVLYLTTDRGTIHKVVEPGEQEHSFAFNIME 455
>AM180451-1|CAJ55404.1| 666|Homo sapiens semaphorin 7A protein.
Length = 666
Score = 45.6 bits (103), Expect = 9e-05
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +1
Query: 40 VPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPSF--LARPVLIRVSLQYRFSAIAVH 213
+P RPG C+ D + + HP + + V L P+ +Y + +AVH
Sbjct: 358 LPNPRPGKCLPDQQPIPTETFQVADRHPEVAQRVEPMGPLKTPLF---HSKYHYQKVAVH 414
Query: 214 PQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEE 339
++QA +G + V+Y+ TD G + K V E F ++ E
Sbjct: 415 -RMQASHGETFHVLYLTTDRGTIHKVVEPGEQEHSFAFNIME 455
>AM180450-1|CAJ55403.1| 666|Homo sapiens semaphorin 7A protein.
Length = 666
Score = 45.6 bits (103), Expect = 9e-05
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +1
Query: 40 VPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPSF--LARPVLIRVSLQYRFSAIAVH 213
+P RPG C+ D + + HP + + V L P+ +Y + +AVH
Sbjct: 358 LPNPRPGKCLPDQQPIPTETFQVADRHPEVAQRVEPMGPLKTPLF---HSKYHYQKVAVH 414
Query: 214 PQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEE 339
++QA +G + V+Y+ TD G + K V E F ++ E
Sbjct: 415 -RMQASHGETFHVLYLTTDRGTIHKVVEPGEQEHSFAFNIME 455
>AM180449-1|CAJ55402.1| 666|Homo sapiens semaphorin 7A protein.
Length = 666
Score = 45.6 bits (103), Expect = 9e-05
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +1
Query: 40 VPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPSF--LARPVLIRVSLQYRFSAIAVH 213
+P RPG C+ D + + HP + + V L P+ +Y + +AVH
Sbjct: 358 LPNPRPGKCLPDQQPIPTETFQVADRHPEVAQRVEPMGPLKTPLF---HSKYHYQKVAVH 414
Query: 214 PQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEE 339
++QA +G + V+Y+ TD G + K V E F ++ E
Sbjct: 415 -RMQASHGETFHVLYLTTDRGTIHKVVEPGEQEHSFAFNIME 455
>AM180448-1|CAJ55401.1| 666|Homo sapiens semaphorin 7A protein.
Length = 666
Score = 45.6 bits (103), Expect = 9e-05
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +1
Query: 40 VPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPSF--LARPVLIRVSLQYRFSAIAVH 213
+P RPG C+ D + + HP + + V L P+ +Y + +AVH
Sbjct: 358 LPNPRPGKCLPDQQPIPTETFQVADRHPEVAQRVEPMGPLKTPLF---HSKYHYQKVAVH 414
Query: 214 PQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEE 339
++QA +G + V+Y+ TD G + K V E F ++ E
Sbjct: 415 -RMQASHGETFHVLYLTTDRGTIHKVVEPGEQEHSFAFNIME 455
>AM180447-1|CAJ55400.1| 666|Homo sapiens semaphorin 7A protein.
Length = 666
Score = 45.6 bits (103), Expect = 9e-05
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +1
Query: 40 VPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPSF--LARPVLIRVSLQYRFSAIAVH 213
+P RPG C+ D + + HP + + V L P+ +Y + +AVH
Sbjct: 358 LPNPRPGKCLPDQQPIPTETFQVADRHPEVAQRVEPMGPLKTPLF---HSKYHYQKVAVH 414
Query: 214 PQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEE 339
++QA +G + V+Y+ TD G + K V E F ++ E
Sbjct: 415 -RMQASHGETFHVLYLTTDRGTIHKVVEPGEQEHSFAFNIME 455
>AM180446-1|CAJ55399.1| 666|Homo sapiens semaphorin 7A protein.
Length = 666
Score = 45.6 bits (103), Expect = 9e-05
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +1
Query: 40 VPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPSF--LARPVLIRVSLQYRFSAIAVH 213
+P RPG C+ D + + HP + + V L P+ +Y + +AVH
Sbjct: 358 LPNPRPGKCLPDQQPIPTETFQVADRHPEVAQRVEPMGPLKTPLF---HSKYHYQKVAVH 414
Query: 214 PQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEE 339
++QA +G + V+Y+ TD G + K V E F ++ E
Sbjct: 415 -RMQASHGETFHVLYLTTDRGTIHKVVEPGEQEHSFAFNIME 455
>AM180445-1|CAJ55398.1| 666|Homo sapiens semaphorin 7A protein.
Length = 666
Score = 45.6 bits (103), Expect = 9e-05
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +1
Query: 40 VPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPSF--LARPVLIRVSLQYRFSAIAVH 213
+P RPG C+ D + + HP + + V L P+ +Y + +AVH
Sbjct: 358 LPNPRPGKCLPDQQPIPTETFQVADRHPEVAQRVEPMGPLKTPLF---HSKYHYQKVAVH 414
Query: 214 PQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEE 339
++QA +G + V+Y+ TD G + K V E F ++ E
Sbjct: 415 -RMQASHGETFHVLYLTTDRGTIHKVVEPGEQEHSFAFNIME 455
>AF071542-1|AAC80456.1| 666|Homo sapiens semaphorin K1 protein.
Length = 666
Score = 45.6 bits (103), Expect = 9e-05
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +1
Query: 40 VPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPSF--LARPVLIRVSLQYRFSAIAVH 213
+P RPG C+ D + + HP + + V L P+ +Y + +AVH
Sbjct: 358 LPNPRPGKCLPDQQPIPTETFQVADRHPEVAQRVEPMGPLKTPLF---HSKYHYQKVAVH 414
Query: 214 PQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEE 339
++QA +G + V+Y+ TD G + K V E F ++ E
Sbjct: 415 -RMQASHGETFHVLYLTTDRGTIHKVVEPGEQEHSFAFNIME 455
>AF069493-1|AAC82642.1| 666|Homo sapiens GPI-anchored membrane
protein CDw108 precursor protein.
Length = 666
Score = 45.6 bits (103), Expect = 9e-05
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +1
Query: 40 VPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPSF--LARPVLIRVSLQYRFSAIAVH 213
+P RPG C+ D + + HP + + V L P+ +Y + +AVH
Sbjct: 358 LPNPRPGKCLPDQQPIPTETFQVADRHPEVAQRVEPMGPLKTPLF---HSKYHYQKVAVH 414
Query: 214 PQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEE 339
++QA +G + V+Y+ TD G + K V E F ++ E
Sbjct: 415 -RMQASHGETFHVLYLTTDRGTIHKVVEPGEQEHSFAFNIME 455
>AF030698-1|AAC34261.1| 666|Homo sapiens semaphorin L protein.
Length = 666
Score = 45.6 bits (103), Expect = 9e-05
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +1
Query: 40 VPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPSF--LARPVLIRVSLQYRFSAIAVH 213
+P RPG C+ D + + HP + + V L P+ +Y + +AVH
Sbjct: 358 LPNPRPGKCLPDQQPIPTETFQVADRHPEVAQRVEPMGPLKTPLF---HSKYHYQKVAVH 414
Query: 214 PQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEE 339
++QA +G + V+Y+ TD G + K V E F ++ E
Sbjct: 415 -RMQASHGETFHVLYLTTDRGTIHKVVEPGEQEHSFAFNIME 455
>AF030697-1|AAC34741.1| 594|Homo sapiens semaphorin L protein.
Length = 594
Score = 45.6 bits (103), Expect = 9e-05
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +1
Query: 40 VPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPSF--LARPVLIRVSLQYRFSAIAVH 213
+P RPG C+ D + + HP + + V L P+ +Y + +AVH
Sbjct: 286 LPNPRPGKCLPDQQPIPTETFQVADRHPEVAQRVEPMGPLKTPLF---HSKYHYQKVAVH 342
Query: 214 PQVQAMNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEE 339
++QA +G + V+Y+ TD G + K V E F ++ E
Sbjct: 343 -RMQASHGETFHVLYLTTDRGTIHKVVEPGEQEHSFAFNIME 383
>AK092182-1|BAC03823.1| 132|Homo sapiens protein ( Homo sapiens
cDNA FLJ34863 fis, clone NT2NE2014013, moderately
similar to SEMAPHORIN 3B PRECURSOR. ).
Length = 132
Score = 42.3 bits (95), Expect = 9e-04
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = +1
Query: 157 RPVLIRVSLQYRFSAIAVHPQVQAMNGNKYDVMYIGTDDGRVIKAVNV 300
RP+ ++V Y F+ IA +V A +G+ YDV++IGTD G V+K ++V
Sbjct: 11 RPLFLQVGANYTFTQIAAD-RVAAADGH-YDVLFIGTDVGTVLKVISV 56
>L13689-1|AAA19873.1| 326|Homo sapiens BMI-1 protein.
Length = 326
Score = 32.3 bits (70), Expect = 0.94
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 6/101 (5%)
Frame = +1
Query: 67 VEDSRNLTDSEVNFIKTHPLM----DKAVPSFLAR--PVLIRVSLQYRFSAIAVHPQVQA 228
+E S+ +V KT PL+ DK + + + P L + ++ R A HP A
Sbjct: 47 LETSKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAHPSADA 106
Query: 229 MNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKN 351
NG+ D + +D R+I +++ + S+E + +N
Sbjct: 107 ANGSNEDRGEVADEDKRII------TDDEIISLSIEFFDQN 141
>CR456911-1|CAG33192.1| 326|Homo sapiens COMMD3 protein.
Length = 326
Score = 32.3 bits (70), Expect = 0.94
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 6/101 (5%)
Frame = +1
Query: 67 VEDSRNLTDSEVNFIKTHPLM----DKAVPSFLAR--PVLIRVSLQYRFSAIAVHPQVQA 228
+E S+ +V KT PL+ DK + + + P L + ++ R A HP A
Sbjct: 47 LETSKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAHPSADA 106
Query: 229 MNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKN 351
NG+ D + +D R+I +++ + S+E + +N
Sbjct: 107 ANGSSEDRGEVADEDKRII------TDDEIISLSIEFFDQN 141
>BC011652-1|AAH11652.1| 326|Homo sapiens BMI1 polycomb ring finger
oncogene protein.
Length = 326
Score = 32.3 bits (70), Expect = 0.94
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 6/101 (5%)
Frame = +1
Query: 67 VEDSRNLTDSEVNFIKTHPLM----DKAVPSFLAR--PVLIRVSLQYRFSAIAVHPQVQA 228
+E S+ +V KT PL+ DK + + + P L + ++ R A HP A
Sbjct: 47 LETSKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAHPSADA 106
Query: 229 MNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKN 351
NG+ D + +D R+I +++ + S+E + +N
Sbjct: 107 ANGSNEDRGEVADEDKRII------TDDEIISLSIEFFDQN 141
>AL158211-10|CAI15958.1| 326|Homo sapiens BMI1 polycomb ring finger
oncogene protein.
Length = 326
Score = 32.3 bits (70), Expect = 0.94
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 6/101 (5%)
Frame = +1
Query: 67 VEDSRNLTDSEVNFIKTHPLM----DKAVPSFLAR--PVLIRVSLQYRFSAIAVHPQVQA 228
+E S+ +V KT PL+ DK + + + P L + ++ R A HP A
Sbjct: 47 LETSKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAHPSADA 106
Query: 229 MNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKN 351
NG+ D + +D R+I +++ + S+E + +N
Sbjct: 107 ANGSNEDRGEVADEDKRII------TDDEIISLSIEFFDQN 141
>AL158211-9|CAI15957.1| 207|Homo sapiens BMI1 polycomb ring finger
oncogene protein.
Length = 207
Score = 32.3 bits (70), Expect = 0.94
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 6/101 (5%)
Frame = +1
Query: 67 VEDSRNLTDSEVNFIKTHPLM----DKAVPSFLAR--PVLIRVSLQYRFSAIAVHPQVQA 228
+E S+ +V KT PL+ DK + + + P L + ++ R A HP A
Sbjct: 47 LETSKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAHPSADA 106
Query: 229 MNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKN 351
NG+ D + +D R+I +++ + S+E + +N
Sbjct: 107 ANGSNEDRGEVADEDKRII------TDDEIISLSIEFFDQN 141
>AL158211-8|CAI15956.1| 150|Homo sapiens BMI1 polycomb ring finger
oncogene protein.
Length = 150
Score = 32.3 bits (70), Expect = 0.94
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 6/101 (5%)
Frame = +1
Query: 67 VEDSRNLTDSEVNFIKTHPLM----DKAVPSFLAR--PVLIRVSLQYRFSAIAVHPQVQA 228
+E S+ +V KT PL+ DK + + + P L + ++ R A HP A
Sbjct: 47 LETSKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAHPSADA 106
Query: 229 MNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKN 351
NG+ D + +D R+I +++ + S+E + +N
Sbjct: 107 ANGSNEDRGEVADEDKRII------TDDEIISLSIEFFDQN 141
>S62198-1|AAB27059.1| 289|Homo sapiens flvi-2/bmi-1 protein.
Length = 289
Score = 29.9 bits (64), Expect = 5.0
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Frame = +1
Query: 67 VEDSRNLTDSEVNFIKTHPLM----DKAVPSFLAR--PVLIRVSLQYRFSAIAVHPQVQA 228
+E S+ +V KT PL+ DK + + + P L + ++ R A HP A
Sbjct: 36 LETSKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAHPSADA 95
Query: 229 MNGNKYDVMYIGTDDGRVIKAVNVASNEGVFDASVEEYSKN 351
N + D + +D R+I +++ + S+E + +N
Sbjct: 96 ANSSNEDRGEVADEDKRII------TDDEIISLSIEFFDQN 130
>BC114623-1|AAI14624.1| 537|Homo sapiens SEMA6C protein protein.
Length = 537
Score = 29.9 bits (64), Expect = 5.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 16 WLPLEKEKVPPTRPGSCVEDSRNL 87
W P+ +++VP RPGSC S L
Sbjct: 357 WTPVSEDRVPSPRPGSCPAHSSPL 380
>Z97989-3|CAI22298.1| 574|Homo sapiens TRAF3 interacting protein 2
protein.
Length = 574
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 19 LPLEKEKVPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPS 147
L L + P +R +C+ ++ L DSE +F + HP + KA PS
Sbjct: 76 LKLANHQRPVSRQVTCLR-TQVLEDSEDSFCRRHPGLGKAFPS 117
>Z97989-2|CAI22297.1| 565|Homo sapiens TRAF3 interacting protein 2
protein.
Length = 565
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 19 LPLEKEKVPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPS 147
L L + P +R +C+ ++ L DSE +F + HP + KA PS
Sbjct: 67 LKLANHQRPVSRQVTCLR-TQVLEDSEDSFCRRHPGLGKAFPS 108
>Z97989-1|CAI22296.1| 564|Homo sapiens TRAF3 interacting protein 2
protein.
Length = 564
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 19 LPLEKEKVPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPS 147
L L + P +R +C+ ++ L DSE +F + HP + KA PS
Sbjct: 67 LKLANHQRPVSRQVTCLR-TQVLEDSEDSFCRRHPGLGKAFPS 108
>BC114521-1|AAI14522.1| 474|Homo sapiens SEMA6C protein protein.
Length = 474
Score = 29.5 bits (63), Expect = 6.6
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 16 WLPLEKEKVPPTRPGSC 66
W P+ +++VP RPGSC
Sbjct: 357 WTPVSEDRVPSPRPGSC 373
>BC002823-1|AAH02823.1| 565|Homo sapiens TRAF3 interacting protein
2 protein.
Length = 565
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 19 LPLEKEKVPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPS 147
L L + P +R +C+ ++ L DSE +F + HP + KA PS
Sbjct: 67 LKLANHQRPVSRQVTCLR-TQVLEDSEDSFCRRHPGLGKAFPS 108
>AL008730-3|CAA15506.1| 574|Homo sapiens TRAF3 interacting protein
2 protein.
Length = 574
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 19 LPLEKEKVPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPS 147
L L + P +R +C+ ++ L DSE +F + HP + KA PS
Sbjct: 76 LKLANHQRPVSRQVTCLR-TQVLEDSEDSFCRRHPGLGKAFPS 117
>AL008730-2|CAD92597.1| 565|Homo sapiens TRAF3 interacting protein
2 protein.
Length = 565
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 19 LPLEKEKVPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPS 147
L L + P +R +C+ ++ L DSE +F + HP + KA PS
Sbjct: 67 LKLANHQRPVSRQVTCLR-TQVLEDSEDSFCRRHPGLGKAFPS 108
>AL008730-1|CAD92598.1| 564|Homo sapiens TRAF3 interacting protein
2 protein.
Length = 564
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 19 LPLEKEKVPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPS 147
L L + P +R +C+ ++ L DSE +F + HP + KA PS
Sbjct: 67 LKLANHQRPVSRQVTCLR-TQVLEDSEDSFCRRHPGLGKAFPS 108
>AK025351-1|BAB15117.1| 564|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21698 fis, clone COL09828. ).
Length = 564
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 19 LPLEKEKVPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPS 147
L L + P +R +C+ ++ L DSE +F + HP + KA PS
Sbjct: 67 LKLANHQRPVSRQVTCLR-TQVLEDSEDSFCRRHPGLGKAFPS 108
>AF274303-1|AAG15367.1| 574|Homo sapiens NFkB-activating protein
ACT1 protein.
Length = 574
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 19 LPLEKEKVPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPS 147
L L + P +R +C+ ++ L DSE +F + HP + KA PS
Sbjct: 76 LKLANHQRPVSRQVTCLR-TQVLEDSEDSFCRRHPGLGKAFPS 117
>AF272151-1|AAG15407.1| 574|Homo sapiens adaptor protein CIKS
protein.
Length = 574
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 19 LPLEKEKVPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPS 147
L L + P +R +C+ ++ L DSE +F + HP + KA PS
Sbjct: 76 LKLANHQRPVSRQVTCLR-TQVLEDSEDSFCRRHPGLGKAFPS 117
>AF136407-1|AAF67447.1| 565|Homo sapiens unknown protein.
Length = 565
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 19 LPLEKEKVPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPS 147
L L + P +R +C+ ++ L DSE +F + HP + KA PS
Sbjct: 67 LKLANHQRPVSRQVTCLR-TQVLEDSEDSFCRRHPGLGKAFPS 108
>AF136406-1|AAF67446.1| 565|Homo sapiens unknown protein.
Length = 565
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 19 LPLEKEKVPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPS 147
L L + P +R +C+ ++ L DSE +F + HP + KA PS
Sbjct: 67 LKLANHQRPVSRQVTCLR-TQVLEDSEDSFCRRHPGLGKAFPS 108
>AF136405-1|AAF67445.1| 574|Homo sapiens unknown protein.
Length = 574
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 19 LPLEKEKVPPTRPGSCVEDSRNLTDSEVNFIKTHPLMDKAVPS 147
L L + P +R +C+ ++ L DSE +F + HP + KA PS
Sbjct: 76 LKLANHQRPVSRQVTCLR-TQVLEDSEDSFCRRHPGLGKAFPS 117
>AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3
protein.
Length = 1217
Score = 29.1 bits (62), Expect = 8.8
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -2
Query: 380 TSEMTAVLTGFLLYSSTLASNTPSLEATFTALITLPSSVPMYITS 246
TS T T + + T + +TPS ++ T T S P YITS
Sbjct: 58 TSHSTPSFTSSIRTTETTSYSTPSFTSSNTITETTSHSTPSYITS 102
>AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein.
Length = 957
Score = 29.1 bits (62), Expect = 8.8
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -2
Query: 380 TSEMTAVLTGFLLYSSTLASNTPSLEATFTALITLPSSVPMYITS 246
TS T T + + T + +TPS ++ T T S P YITS
Sbjct: 58 TSHSTPSFTSSIRTTETTSYSTPSFTSSNTITETTSHSTPSYITS 102
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.316 0.132 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,965,259
Number of Sequences: 237096
Number of extensions: 1322620
Number of successful extensions: 4602
Number of sequences better than 10.0: 136
Number of HSP's better than 10.0 without gapping: 4301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4460
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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