Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_B13
         (492 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   4.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   4.1  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   7.1  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   9.4  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.4  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    21   9.4  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    21   9.4  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   9.4  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.4  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +3

Query: 75  QQKPHRLRSELYKNSSVNGQS 137
           + + HRL++ LY N S + ++
Sbjct: 202 ESEQHRLQNRLYTNDSTSSKT 222


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +3

Query: 75  QQKPHRLRSELYKNSSVNGQS 137
           + + HRL++ LY N S + ++
Sbjct: 240 ESEQHRLQNRLYTNDSTSSKT 260


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 353 GFLLYSSTLASNTPSLEATFT 291
           G+L++SST++   P     FT
Sbjct: 205 GYLIFSSTISFYLPLFVMVFT 225


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 54  TGFLCRRQQK 83
           +GFLC R QK
Sbjct: 293 SGFLCERHQK 302


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -2

Query: 95  ESVRFLLSSTQEPGLV 48
           + V+FL+++T  PG+V
Sbjct: 174 DHVQFLITNTSGPGVV 189


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 149 FWHDQYSYELVCSIDFLLSL 208
           FW +QYS+ L  ++  +L +
Sbjct: 321 FWLEQYSWALFKAMSHMLCI 340


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 149 FWHDQYSYELVCSIDFLLSL 208
           FW +QYS+ L  ++  +L +
Sbjct: 289 FWLEQYSWALFKAMSHMLCI 308


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 30  KRKSATDKTGFLCRRQQKPHRLRSELYK 113
           K +   +    LCRR  +   LRS L K
Sbjct: 14  KDEKIVELEALLCRRDAEIQELRSHLDK 41


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -2

Query: 95  ESVRFLLSSTQEPGLV 48
           + V+FL+++T  PG+V
Sbjct: 174 DHVQFLITNTSGPGVV 189


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.316    0.132    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,473
Number of Sequences: 438
Number of extensions: 2612
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13544190
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)