Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_B11
         (422 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...   187   2e-49
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     27   0.28 
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       24   2.6  
EF588468-1|ABQ96704.1|  176|Anopheles gambiae transposase protein.     22   8.0  

>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score =  187 bits (455), Expect = 2e-49
 Identities = 93/126 (73%), Positives = 101/126 (80%)
 Frame = +3

Query: 36  MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRR 215
           MGRVRT             YYTRLT+DFDTNKRI EE+AIIPTKPLRNKIAGF THLM+R
Sbjct: 1   MGRVRTKTIKKASKVIIEKYYTRLTMDFDTNKRIVEEVAIIPTKPLRNKIAGFVTHLMKR 60

Query: 216 LIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLP 395
           L HSQVRGISIKLQEEERERRDNYVP+VSALEQDIIEVD +TK+MLK LDF+NI  +QL 
Sbjct: 61  LRHSQVRGISIKLQEEERERRDNYVPDVSALEQDIIEVDPETKEMLKHLDFNNI-VVQLT 119

Query: 396 QPATQG 413
            P   G
Sbjct: 120 NPTAPG 125


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 27.1 bits (57), Expect = 0.28
 Identities = 14/47 (29%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = +3

Query: 237 GISIKLQEEERERRDNYVPEVSALE-QDIIEVDSDTKDMLKMLDFSN 374
           G + +L+EEE + +  + PE+   E  + ++V ++ K+M+ + D SN
Sbjct: 87  GTTCELEEEEVDLQAKHAPEMDGSELMEAVDVAAELKNMV-LQDISN 132


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +1

Query: 259 KRSVKGVTIMSQKYLL*NRISLKSI 333
           K  +K VT+M  K  + N ISLK++
Sbjct: 214 KMKMKSVTVMFPKMHISNSISLKNV 238


>EF588468-1|ABQ96704.1|  176|Anopheles gambiae transposase protein.
          Length = 176

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 80  NLRRFFYGLSPN 45
           N ++FFY L+PN
Sbjct: 129 NFKKFFYTLNPN 140


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 416,280
Number of Sequences: 2352
Number of extensions: 8105
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 35060166
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)