Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_B10
         (427 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000069DCDA Cluster: UDP-glucuronosyltransferase 1-3 ...    32   5.7  
UniRef50_Q5KPL7 Cluster: Ras guanyl-nucleotide exchange factor, ...    32   5.7  
UniRef50_Q4PEE0 Cluster: Putative uncharacterized protein; n=1; ...    31   9.9  

>UniRef50_UPI000069DCDA Cluster: UDP-glucuronosyltransferase 1-3
           precursor, microsomal (EC 2.4.1.17)
           (UDP-glucuronosyltransferase 1A3) (UDPGT) (UGT1*3)
           (UGT1-03) (UGT1.3) (UGT-1C) (UGT1C).; n=1; Xenopus
           tropicalis|Rep: UDP-glucuronosyltransferase 1-3
           precursor, microsomal (EC 2.4.1.17)
           (UDP-glucuronosyltransferase 1A3) (UDPGT) (UGT1*3)
           (UGT1-03) (UGT1.3) (UGT-1C) (UGT1C). - Xenopus
           tropicalis
          Length = 448

 Score = 31.9 bits (69), Expect = 5.7
 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +3

Query: 162 FNKI-NLFVKSFSSPLLRRLMTSAARHTMSEVLSVRVLTN 278
           FN + N  VK+FSSP  + ++ S  RH   E+ + R+LT+
Sbjct: 71  FNDLDNYKVKTFSSPYSKDVLESRVRHMNLEIFADRILTD 110


>UniRef50_Q5KPL7 Cluster: Ras guanyl-nucleotide exchange factor,
           putative; n=2; Filobasidiella neoformans|Rep: Ras
           guanyl-nucleotide exchange factor, putative -
           Cryptococcus neoformans (Filobasidiella neoformans)
          Length = 1023

 Score = 31.9 bits (69), Expect = 5.7
 Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
 Frame = +2

Query: 251 GPVRTCVNQL*HLKLVIFSIIIKT*RRQNR-KIENRFIYLYHIMLRVTLY 397
           GPVR  +N   HL   I +I++ + + ++R ++  RFI++ H + R+  Y
Sbjct: 804 GPVRKSINFFNHLSRWISTIVLASSKAKHRARVIERFIFIAHQLRRLNNY 853


>UniRef50_Q4PEE0 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 439

 Score = 31.1 bits (67), Expect = 9.9
 Identities = 18/60 (30%), Positives = 31/60 (51%)
 Frame = +3

Query: 69  NFDHWKNTIYE*KGNKTSQDWSLGPRCSINQFNKINLFVKSFSSPLLRRLMTSAARHTMS 248
           +FD   +T+   +     Q+W   PR      +++    +SF+SP+ +R  +S ARHT S
Sbjct: 262 DFDPSPSTLPRFEDYSLRQEWHELPRIHHPPTHRLAPKFRSFASPIPKRRSSSPARHTNS 321


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 389,140,222
Number of Sequences: 1657284
Number of extensions: 6693763
Number of successful extensions: 12200
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12185
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)