Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_B08
(433 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7PYY1 Cluster: ENSANGP00000019231; n=2; Diptera|Rep: E... 182 4e-45
UniRef50_UPI0000DB786C Cluster: PREDICTED: similar to mitochondr... 163 1e-39
UniRef50_Q8MS27 Cluster: 39S ribosomal protein L35, mitochondria... 162 2e-39
UniRef50_UPI0000D57133 Cluster: PREDICTED: similar to CG13410-PA... 146 2e-34
UniRef50_Q0D286 Cluster: Zgc:153670; n=2; Danio rerio|Rep: Zgc:1... 136 1e-31
UniRef50_Q9NZE8 Cluster: 39S ribosomal protein L35, mitochondria... 135 4e-31
UniRef50_UPI000065E88E Cluster: 39S ribosomal protein L35, mitoc... 133 1e-30
UniRef50_Q9CQL6 Cluster: 39S ribosomal protein L35, mitochondria... 127 1e-28
UniRef50_UPI0000E48CA9 Cluster: PREDICTED: similar to mitochondr... 121 7e-27
UniRef50_UPI0000E804AE Cluster: PREDICTED: hypothetical protein;... 115 4e-25
UniRef50_UPI0000E25C5C Cluster: PREDICTED: hypothetical protein;... 106 2e-22
UniRef50_Q21454 Cluster: Probable 39S ribosomal protein L35, mit... 74 1e-12
UniRef50_A7S0L5 Cluster: Predicted protein; n=1; Nematostella ve... 56 4e-07
UniRef50_UPI0000E1F515 Cluster: PREDICTED: similar to mitochondr... 54 1e-06
UniRef50_Q2YZU7 Cluster: 50S ribosomal protein L35; n=4; Bacteri... 36 0.36
UniRef50_A5N257 Cluster: 50S ribosomal protein L35; n=5; Bacteri... 36 0.36
UniRef50_Q4A6Z4 Cluster: Putative uncharacterized protein; n=2; ... 36 0.48
UniRef50_Q84K87 Cluster: 50S ribosomal protein L35; n=7; Poaceae... 35 0.84
UniRef50_Q0WYG7 Cluster: Arylphorin; n=2; Crambidae|Rep: Arylpho... 34 1.1
UniRef50_A7AQY0 Cluster: Ribosomal protein L35, putative; n=1; B... 34 1.1
UniRef50_A7ALZ9 Cluster: Putative uncharacterized protein; n=1; ... 34 1.5
UniRef50_UPI00006CC873 Cluster: hypothetical protein TTHERM_0028... 33 1.9
UniRef50_Q23W31 Cluster: Putative uncharacterized protein; n=1; ... 33 2.6
UniRef50_A5K6E8 Cluster: 50S ribosomal protein L35; n=1; Plasmod... 33 2.6
UniRef50_Q04845 Cluster: Modification methylase CfrBI (EC 2.1.1.... 33 2.6
UniRef50_UPI0000DB7136 Cluster: PREDICTED: similar to lethal (1)... 33 3.4
UniRef50_Q65WW6 Cluster: Putative uncharacterized protein P0486C... 32 5.9
UniRef50_P66268 Cluster: 50S ribosomal protein L35; n=8; Chlamyd... 32 5.9
UniRef50_P26267 Cluster: Pyruvate dehydrogenase E1 component sub... 32 5.9
UniRef50_O06962 Cluster: Hypothetical pyruvate formate-lyase; n=... 31 7.8
UniRef50_Q9FH41 Cluster: Arabidopsis thaliana genomic DNA, chrom... 31 7.8
UniRef50_A2ZCN4 Cluster: Putative uncharacterized protein; n=1; ... 31 7.8
UniRef50_A7AQ82 Cluster: Vps53-like family protein; n=1; Babesia... 31 7.8
UniRef50_Q0U5T7 Cluster: Putative uncharacterized protein; n=1; ... 31 7.8
UniRef50_Q0UPL5 Cluster: PAB-dependent poly(A)-specific ribonucl... 31 7.8
>UniRef50_Q7PYY1 Cluster: ENSANGP00000019231; n=2; Diptera|Rep:
ENSANGP00000019231 - Anopheles gambiae str. PEST
Length = 192
Score = 182 bits (442), Expect = 4e-45
Identities = 78/105 (74%), Positives = 91/105 (86%)
Frame = +2
Query: 32 PSRPVTKFSLKKGKRKTVKAVVRRFFRLHWGGWIRTKAGRQKKMWKKSLSQKRRLRQHVF 211
PSR V KFSL+KGKRKTVKAV++RF RL WGGWIRT +GR KKMW+K ++KRRLRQHV
Sbjct: 87 PSRTVIKFSLRKGKRKTVKAVIKRFKRLDWGGWIRTLSGRHKKMWRKKANRKRRLRQHVL 146
Query: 212 CNATQNTLLDKMVTKYWKRPKYYVEDPYTPYHTRNEYHSTRKTPL 346
NATQ+TLLDKMVTKYWKRP+YY++DPYTPYHTR E+ TR+ PL
Sbjct: 147 VNATQSTLLDKMVTKYWKRPRYYIDDPYTPYHTREEFVYTRRKPL 191
>UniRef50_UPI0000DB786C Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L35 CG13410-PA; n=1; Apis
mellifera|Rep: PREDICTED: similar to mitochondrial
ribosomal protein L35 CG13410-PA - Apis mellifera
Length = 185
Score = 163 bits (396), Expect = 1e-39
Identities = 69/102 (67%), Positives = 85/102 (83%)
Frame = +2
Query: 38 RPVTKFSLKKGKRKTVKAVVRRFFRLHWGGWIRTKAGRQKKMWKKSLSQKRRLRQHVFCN 217
R + K+S KKGKRKTVKAV++RF+RL+WG WIRT AGR KK+WKKS ++ +L+QHVFCN
Sbjct: 81 RTLIKYSRKKGKRKTVKAVLKRFYRLNWGIWIRTFAGRHKKLWKKSAKRRYKLKQHVFCN 140
Query: 218 ATQNTLLDKMVTKYWKRPKYYVEDPYTPYHTRNEYHSTRKTP 343
A Q+TLLDKMV YW+RP YYV+DPYTPYH+R E+ TRK P
Sbjct: 141 AKQSTLLDKMVNYYWRRPHYYVDDPYTPYHSREEFPFTRKQP 182
>UniRef50_Q8MS27 Cluster: 39S ribosomal protein L35, mitochondrial
precursor; n=1; Drosophila melanogaster|Rep: 39S
ribosomal protein L35, mitochondrial precursor -
Drosophila melanogaster (Fruit fly)
Length = 178
Score = 162 bits (394), Expect = 2e-39
Identities = 70/103 (67%), Positives = 88/103 (85%)
Frame = +2
Query: 26 PVPSRPVTKFSLKKGKRKTVKAVVRRFFRLHWGGWIRTKAGRQKKMWKKSLSQKRRLRQH 205
P +R VTKFSL KGKRKTVKAV++RF RL WG WIRT +GRQKK++KKS + +RRL+QH
Sbjct: 70 PSNTRNVTKFSLVKGKRKTVKAVLKRFKRLDWGAWIRTHSGRQKKLFKKSAALRRRLKQH 129
Query: 206 VFCNATQNTLLDKMVTKYWKRPKYYVEDPYTPYHTRNEYHSTR 334
VF NATQ+ LLDKMVT YW+RPK+++ DPY PYH+RNEY++T+
Sbjct: 130 VFTNATQSWLLDKMVTSYWRRPKHFINDPYKPYHSRNEYYATQ 172
>UniRef50_UPI0000D57133 Cluster: PREDICTED: similar to CG13410-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG13410-PA - Tribolium castaneum
Length = 172
Score = 146 bits (354), Expect = 2e-34
Identities = 62/107 (57%), Positives = 79/107 (73%)
Frame = +2
Query: 29 VPSRPVTKFSLKKGKRKTVKAVVRRFFRLHWGGWIRTKAGRQKKMWKKSLSQKRRLRQHV 208
V SR + K L +G+ K+VKAV RRF+RLHWG WIRT GR K++WKKS + KRRLRQHV
Sbjct: 55 VSSRNLIKLGLNRGRCKSVKAVRRRFYRLHWGAWIRTMCGRHKRLWKKSGANKRRLRQHV 114
Query: 209 FCNATQNTLLDKMVTKYWKRPKYYVEDPYTPYHTRNEYHSTRKTPLI 349
CNA+Q+ LLDKM +W + +YYV+DPY PYHTR EY + + P +
Sbjct: 115 MCNASQSYLLDKMAGPFWTKRRYYVDDPYEPYHTREEYPLSARKPKV 161
>UniRef50_Q0D286 Cluster: Zgc:153670; n=2; Danio rerio|Rep:
Zgc:153670 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 175
Score = 136 bits (330), Expect = 1e-31
Identities = 59/94 (62%), Positives = 73/94 (77%)
Frame = +2
Query: 32 PSRPVTKFSLKKGKRKTVKAVVRRFFRLHWGGWIRTKAGRQKKMWKKSLSQKRRLRQHVF 211
P R +T FSL+KGKRK+VK+V RFFRLH G WIR KAG +KK+WKKS ++++RLR+HVF
Sbjct: 77 PVRNLTYFSLRKGKRKSVKSVTERFFRLHSGQWIRRKAGYKKKLWKKSAARRKRLREHVF 136
Query: 212 CNATQNTLLDKMVTKYWKRPKYYVEDPYTPYHTR 313
CN TQ LLDKM + YWKR +Y+ DPY YH R
Sbjct: 137 CNKTQCKLLDKMTSPYWKRRNWYLNDPYQKYHDR 170
>UniRef50_Q9NZE8 Cluster: 39S ribosomal protein L35, mitochondrial
precursor; n=7; Euteleostomi|Rep: 39S ribosomal protein
L35, mitochondrial precursor - Homo sapiens (Human)
Length = 188
Score = 135 bits (326), Expect = 4e-31
Identities = 58/95 (61%), Positives = 74/95 (77%)
Frame = +2
Query: 29 VPSRPVTKFSLKKGKRKTVKAVVRRFFRLHWGGWIRTKAGRQKKMWKKSLSQKRRLRQHV 208
+P R +T FS +KGKRKTVKAV+ RF RLH G W+R KAG +KK+WKK+ ++K+RLR+ V
Sbjct: 89 LPVRSLTYFSARKGKRKTVKAVIDRFLRLHCGLWVRRKAGYKKKLWKKTPARKKRLREFV 148
Query: 209 FCNATQNTLLDKMVTKYWKRPKYYVEDPYTPYHTR 313
FCN TQ+ LLDKM T +WKR +YV+DPY YH R
Sbjct: 149 FCNKTQSKLLDKMTTSFWKRRNWYVDDPYQKYHDR 183
>UniRef50_UPI000065E88E Cluster: 39S ribosomal protein L35,
mitochondrial precursor (L35mt) (MRP-L35).; n=1;
Takifugu rubripes|Rep: 39S ribosomal protein L35,
mitochondrial precursor (L35mt) (MRP-L35). - Takifugu
rubripes
Length = 165
Score = 133 bits (322), Expect = 1e-30
Identities = 57/99 (57%), Positives = 72/99 (72%)
Frame = +2
Query: 17 HEAPVPSRPVTKFSLKKGKRKTVKAVVRRFFRLHWGGWIRTKAGRQKKMWKKSLSQKRRL 196
H P R +T +S+KKGKRKTVKAV RF RLH G WIR KAG +KK+WKK ++++RL
Sbjct: 63 HATPQSCRNLTYYSVKKGKRKTVKAVTERFMRLHCGLWIRRKAGYKKKLWKKKPARRKRL 122
Query: 197 RQHVFCNATQNTLLDKMVTKYWKRPKYYVEDPYTPYHTR 313
R+HVFCN TQ+ L +KM T +WKR ++V DPY YH R
Sbjct: 123 REHVFCNKTQSKLFNKMTTSFWKRRNWFVNDPYLKYHNR 161
>UniRef50_Q9CQL6 Cluster: 39S ribosomal protein L35, mitochondrial
precursor; n=12; Amniota|Rep: 39S ribosomal protein L35,
mitochondrial precursor - Mus musculus (Mouse)
Length = 188
Score = 127 bits (306), Expect = 1e-28
Identities = 56/94 (59%), Positives = 70/94 (74%)
Frame = +2
Query: 32 PSRPVTKFSLKKGKRKTVKAVVRRFFRLHWGGWIRTKAGRQKKMWKKSLSQKRRLRQHVF 211
P R +T S +KGKRKTVK+VV RF RLH G W+R KAG +KK+WKKS ++K+RLR+ VF
Sbjct: 90 PVRALTYCSTRKGKRKTVKSVVHRFLRLHSGLWLRRKAGYKKKLWKKSTARKKRLREFVF 149
Query: 212 CNATQNTLLDKMVTKYWKRPKYYVEDPYTPYHTR 313
C+ TQ+ LLDKM T +WKR +Y DPY YH R
Sbjct: 150 CSKTQSKLLDKMTTSFWKRRNWYAGDPYQMYHDR 183
>UniRef50_UPI0000E48CA9 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L35; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to mitochondrial
ribosomal protein L35 - Strongylocentrotus purpuratus
Length = 332
Score = 121 bits (291), Expect = 7e-27
Identities = 47/95 (49%), Positives = 73/95 (76%)
Frame = +2
Query: 32 PSRPVTKFSLKKGKRKTVKAVVRRFFRLHWGGWIRTKAGRQKKMWKKSLSQKRRLRQHVF 211
P R V ++S+ KGK+KTV AV+ RF+RL G W+R ++GR KK+WKK+ ++ RL+QHVF
Sbjct: 225 PHRTVVRYSISKGKKKTVHAVIDRFYRLDCGLWVRPQSGRAKKLWKKTPRRRYRLKQHVF 284
Query: 212 CNATQNTLLDKMVTKYWKRPKYYVEDPYTPYHTRN 316
CN TQ+ +LD+M + +WK+ ++Y++DP+ YH R+
Sbjct: 285 CNKTQSKMLDRMTSGFWKKRRHYLDDPFEQYHERH 319
>UniRef50_UPI0000E804AE Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 190
Score = 115 bits (277), Expect = 4e-25
Identities = 54/101 (53%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Frame = +2
Query: 32 PSRPVTKFSLKKGKRKTVKAVVRRFFRLHWGGWIRTKAGRQKKMWKKSLSQKRRLRQHVF 211
P RP+T + L+KGKRK+VKAVV+RF RLH G W+R K+G +KK+WKKS +QK+RLR+ V
Sbjct: 79 PVRPLTYYGLRKGKRKSVKAVVKRFLRLHNGLWVRRKSGYKKKLWKKSTAQKKRLREFVL 138
Query: 212 CNATQNTLLDKMVTKYWKRPK-YYVEDPYTPYHTRNEYHST 331
CN TQ LLDKM T +WKR + E + H + + H T
Sbjct: 139 CNRTQCKLLDKMTTSFWKRRNCVFSEGFFLLTHWKIQLHYT 179
>UniRef50_UPI0000E25C5C Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 168
Score = 106 bits (254), Expect = 2e-22
Identities = 47/80 (58%), Positives = 61/80 (76%)
Frame = +2
Query: 29 VPSRPVTKFSLKKGKRKTVKAVVRRFFRLHWGGWIRTKAGRQKKMWKKSLSQKRRLRQHV 208
+P R V S +KGKRKTVKAV+ RFFRLH G W+R KAG +KK WKK+ ++K++LR+ V
Sbjct: 89 LPVRTVIYVSTQKGKRKTVKAVIYRFFRLHSGLWVRRKAGYKKKFWKKTPARKKQLREFV 148
Query: 209 FCNATQNTLLDKMVTKYWKR 268
FC+ TQ+ LLDKM +WKR
Sbjct: 149 FCDKTQSKLLDKMTVSFWKR 168
>UniRef50_Q21454 Cluster: Probable 39S ribosomal protein L35,
mitochondrial precursor; n=2; Caenorhabditis|Rep:
Probable 39S ribosomal protein L35, mitochondrial
precursor - Caenorhabditis elegans
Length = 158
Score = 73.7 bits (173), Expect = 1e-12
Identities = 34/95 (35%), Positives = 53/95 (55%)
Frame = +2
Query: 50 KFSLKKGKRKTVKAVVRRFFRLHWGGWIRTKAGRQKKMWKKSLSQKRRLRQHVFCNATQN 229
+F K G+++ + V+ RF RL+ G WI GR K + K + ++ + C Q
Sbjct: 36 RFDQKVGRKRPAQDVLDRFKRLNNGMWIHAHPGRHKLRYMKDETWQKTSLYYETCTKEQC 95
Query: 230 TLLDKMVTKYWKRPKYYVEDPYTPYHTRNEYHSTR 334
+LDK++T YW RPK+Y DPY+ Y+ R+ S R
Sbjct: 96 EILDKLMTPYWLRPKHYPNDPYSAYNVRHNVTSPR 130
>UniRef50_A7S0L5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 167
Score = 55.6 bits (128), Expect = 4e-07
Identities = 32/74 (43%), Positives = 43/74 (58%)
Frame = +2
Query: 29 VPSRPVTKFSLKKGKRKTVKAVVRRFFRLHWGGWIRTKAGRQKKMWKKSLSQKRRLRQHV 208
V +R V S K+GKRKT KAV +R R G R K G+ M KK +R+LR+H
Sbjct: 92 VITRSVNLMS-KRGKRKTCKAVAKRVIRTGTGKLKRWKCGKTHNMIKKRSKNRRQLRKHT 150
Query: 209 FCNATQNTLLDKMV 250
+ + TQ LL+KM+
Sbjct: 151 YVSKTQLKLLNKML 164
>UniRef50_UPI0000E1F515 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L35 isoform a; n=1; Pan
troglodytes|Rep: PREDICTED: similar to mitochondrial
ribosomal protein L35 isoform a - Pan troglodytes
Length = 180
Score = 54.4 bits (125), Expect = 1e-06
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +2
Query: 29 VPSRPVTKFSLKKGKRKTVKAVVRRFFRLHWGGWIRTK 142
+P R +T FS +KGKRKTVKAV+ RF RLH G W+R K
Sbjct: 115 LPVRSLTYFSARKGKRKTVKAVIDRFLRLHCGLWVRRK 152
>UniRef50_Q2YZU7 Cluster: 50S ribosomal protein L35; n=4;
Bacteria|Rep: 50S ribosomal protein L35 - uncultured
delta proteobacterium
Length = 80
Score = 35.9 bits (79), Expect = 0.36
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +2
Query: 71 KRKTVKAVVRRFFRLHWGGWIRTKAGRQKKMWKKSLSQKRRLRQHVFCNATQNTLLDKMV 250
K KT K +RF + G IR KA + KS +QKRRLR+ ++T + +M+
Sbjct: 18 KLKTKKGAAKRFRKTGSGKIIRNKAYTSHLLTNKSSTQKRRLRKSSVADSTNIKAIKRML 77
>UniRef50_A5N257 Cluster: 50S ribosomal protein L35; n=5;
Bacteria|Rep: 50S ribosomal protein L35 - Clostridium
kluyveri DSM 555
Length = 65
Score = 35.9 bits (79), Expect = 0.36
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +2
Query: 71 KRKTVKAVVRRFFRLHWGGWIRTKAGRQKKMWKKSLSQKRRLRQHVFCNATQNTLLDKMV 250
K KT K+V +RF G R +A + + KKS KR LR+ + + TQ ++ K++
Sbjct: 3 KMKTKKSVAKRFKLTGTGKLKRAQAFKSHILTKKSRKTKRNLRKTAYVSETQEKVMKKLL 62
>UniRef50_Q4A6Z4 Cluster: Putative uncharacterized protein; n=2;
Mycoplasma synoviae 53|Rep: Putative uncharacterized
protein - Mycoplasma synoviae (strain 53)
Length = 372
Score = 35.5 bits (78), Expect = 0.48
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = -2
Query: 195 NRLFWDKDFFHIFFCLPAFVLI---HPPQCNLKNLRTTALTVFLF 70
N +FWD FFH F L AFV I +P + LK + T L F+F
Sbjct: 209 NFIFWDYFFFHTFL-LAAFVTINFLNPGKLGLKEISKTLLVCFMF 252
>UniRef50_Q84K87 Cluster: 50S ribosomal protein L35; n=7;
Poaceae|Rep: 50S ribosomal protein L35 - Zea mays
(Maize)
Length = 143
Score = 34.7 bits (76), Expect = 0.84
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Frame = +2
Query: 23 APVPSRPVTKFSL-------KKG-KRKTVKAVVRRFFRLHWGGWIRTKAGRQKKMWKKSL 178
+P+P +P T + KKG K KT KA +RF G +R AG+Q + KK+
Sbjct: 50 SPLPRKPATSTTSLEVVAAGKKGYKMKTHKASAKRFRVTGRGKIVRRCAGKQHLLAKKNT 109
Query: 179 SQKRRLRQHVFCN 217
+K+RL + V N
Sbjct: 110 KRKKRLSKMVQVN 122
>UniRef50_Q0WYG7 Cluster: Arylphorin; n=2; Crambidae|Rep: Arylphorin
- Chilo suppressalis (striped riceborer)
Length = 706
Score = 34.3 bits (75), Expect = 1.1
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 236 LDKMVTKYWKRPKYYVEDPYTPYHTRNEY 322
LD+ VTKY+ +P Y+ED + YH NEY
Sbjct: 661 LDRPVTKYFLQPNMYIED-VSVYHRGNEY 688
>UniRef50_A7AQY0 Cluster: Ribosomal protein L35, putative; n=1;
Babesia bovis|Rep: Ribosomal protein L35, putative -
Babesia bovis
Length = 140
Score = 34.3 bits (75), Expect = 1.1
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Frame = +2
Query: 17 HEAPVPSRPVTKFSLKKG-----KRKTVKAVVRRFFRLHWGGWIRTKAGRQKKMWKKSLS 181
H AP+ +R K L G K KT KAV +RF G I +AG+ KK+
Sbjct: 54 HIAPLFARRAHKLKLTAGGKFRIKPKTNKAVSKRFKITATGKLIYKRAGKSHLQRKKTHG 113
Query: 182 QKRRLRQHV 208
KRRL++ V
Sbjct: 114 AKRRLKRSV 122
>UniRef50_A7ALZ9 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 177
Score = 33.9 bits (74), Expect = 1.5
Identities = 24/87 (27%), Positives = 40/87 (45%)
Frame = +2
Query: 59 LKKGKRKTVKAVVRRFFRLHWGGWIRTKAGRQKKMWKKSLSQKRRLRQHVFCNATQNTLL 238
+KK K K V RF RL GW R + GR+ S+ Q+R ++ F + L
Sbjct: 85 MKKRKHKFHSRVGMRF-RLTRFGWERLQKGRKGNKLHLSIKQRRNKKRIRFVSRHDLVKL 143
Query: 239 DKMVTKYWKRPKYYVEDPYTPYHTRNE 319
+ + Y ++ + DP T Y+ ++
Sbjct: 144 TRQMPSY----RFVIRDPTTNYNPNSQ 166
>UniRef50_UPI00006CC873 Cluster: hypothetical protein
TTHERM_00289130; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00289130 - Tetrahymena
thermophila SB210
Length = 1228
Score = 33.5 bits (73), Expect = 1.9
Identities = 17/76 (22%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 134 RTKAGRQKKMWKKSLSQKRRLRQHVFCNATQNTLLDKMVTKYWKRPKYYVEDPYTPYH-T 310
R K+ +++ +L+Q+ + ++ + Q TL++ +T+ K+ ++ V DP+ P H
Sbjct: 33 RKKSHQERVSCFTNLNQQPSFYKKIYNDCNQYTLINDNLTQLQKQTEFSVFDPFLPEHLD 92
Query: 311 RNEYHSTRKTPLIKNV 358
+N+ K P + +
Sbjct: 93 KNQVKVNPKNPEVMTI 108
>UniRef50_Q23W31 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 805
Score = 33.1 bits (72), Expect = 2.6
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +2
Query: 176 LSQKRRLRQHVFCNATQNTLLDKMVTKYWKRP--KYYVEDPYTPYHTRNEYHSTRK 337
LS R+ + ++F +Q +L K K +P +Y VED Y+P +N +HS++K
Sbjct: 653 LSTNRKTQNNLF--DSQKQILYKGENKILSKPIMEYSVEDDYSPQKIQNFFHSSKK 706
>UniRef50_A5K6E8 Cluster: 50S ribosomal protein L35; n=1; Plasmodium
vivax|Rep: 50S ribosomal protein L35 - Plasmodium vivax
Length = 162
Score = 33.1 bits (72), Expect = 2.6
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +2
Query: 71 KRKTVKAVVRRFFRLHWGGWIRTKAGRQKKMWKKSLSQKRRLRQ 202
K KT K++ +RF G IR KAGR + KK+ S K LR+
Sbjct: 100 KPKTNKSIAKRFKITKNGKVIRKKAGRNHMLRKKTSSNKASLRK 143
>UniRef50_Q04845 Cluster: Modification methylase CfrBI (EC
2.1.1.113) (N(4)- cytosine-specific methyltransferase
CfrBI); n=2; Bacteria|Rep: Modification methylase CfrBI
(EC 2.1.1.113) (N(4)- cytosine-specific
methyltransferase CfrBI) - Citrobacter freundii
Length = 376
Score = 33.1 bits (72), Expect = 2.6
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 140 KAGRQKKMWKKSLSQKRRLRQHVFCNATQNTLLDKMVTKYWKRPKYYVEDP-YTPYHTRN 316
K ++KK+ KS L+ + C T L D+ V + P YY P Y+ YHT +
Sbjct: 98 KVKKEKKIISKSPLNNMLLQGN--CAETLKKLPDESVNLVFTSPPYYNAKPEYSEYHTYD 155
Query: 317 EYHS 328
EY S
Sbjct: 156 EYLS 159
>UniRef50_UPI0000DB7136 Cluster: PREDICTED: similar to lethal (1)
G0144 CG3073-PA; n=2; Apocrita|Rep: PREDICTED: similar
to lethal (1) G0144 CG3073-PA - Apis mellifera
Length = 445
Score = 32.7 bits (71), Expect = 3.4
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = -3
Query: 419 FFFSSLYHFYCTK*SSTGKFRHFLLMESF*CYDTHFSCDMVCKGPLHNTLVSSNILLPFY 240
FFFS L ++ K +R +LL D H+ + V + PL L + Y
Sbjct: 120 FFFSRLVLYHKPKCFEAFAYRRWLLSYMLNSKDGHYDPESV-ESPLCRELDIATTCAERY 178
Query: 239 LVEYSVWHYKKHVVSI 192
Y W +++H++++
Sbjct: 179 ASNYHAWSHRRHILTL 194
>UniRef50_Q65WW6 Cluster: Putative uncharacterized protein
P0486C01.9; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0486C01.9 - Oryza sativa subsp. japonica (Rice)
Length = 357
Score = 31.9 bits (69), Expect = 5.9
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = -3
Query: 305 DMVCKGPLHNTLVSSN--ILLPFYLVEYSVWHYKKHVVSIV 189
+++C P H ++S +LL E+ VW +KK VV+++
Sbjct: 309 EILCLAPSHKIIISKYEFLLLEISKFEFKVWFFKKTVVTVI 349
>UniRef50_P66268 Cluster: 50S ribosomal protein L35; n=8;
Chlamydiales|Rep: 50S ribosomal protein L35 - Chlamydia
muridarum
Length = 64
Score = 31.9 bits (69), Expect = 5.9
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +2
Query: 71 KRKTVKAVVRRFFRLHWGGWIRTKAGRQKKMWKKSLSQKRRLRQHVFCNATQNTLLDKMV 250
K K+ K+V RF G RT+ G++ K+ K+S QKR L + + Q + +M+
Sbjct: 3 KMKSNKSVAARFKLTGSGQLKRTRPGKRHKLSKRSSQQKRNLSKQPLVDQGQVGMYKRMM 62
>UniRef50_P26267 Cluster: Pyruvate dehydrogenase E1 component
subunit alpha type I, mitochondrial precursor; n=10;
cellular organisms|Rep: Pyruvate dehydrogenase E1
component subunit alpha type I, mitochondrial precursor
- Ascaris suum (Pig roundworm) (Ascaris lumbricoides)
Length = 396
Score = 31.9 bits (69), Expect = 5.9
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 209 FCNATQNTLLDKMVTKYWKRPKYYVEDPYTPYHTRNEYHSTRKT 340
+CNA + L+ +M T ++ + + DP T Y TR E RKT
Sbjct: 268 WCNAGKGPLMIEMAT--YRYSGHSMSDPGTSYRTREEVQEVRKT 309
>UniRef50_O06962 Cluster: Hypothetical pyruvate formate-lyase; n=1;
Salmonella typhimurium|Rep: Hypothetical pyruvate
formate-lyase - Salmonella typhimurium
Length = 276
Score = 31.5 bits (68), Expect = 7.8
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +2
Query: 134 RTKAGRQKKMWKKSLSQKRRLRQHVFCNATQNTLLDKMVTKYWKR 268
RT G KK WKKS KR R + C K + + W R
Sbjct: 88 RTMRGILKKSWKKSSVYKRISRLNALCIRLAALTYQKFIPRLWPR 132
>UniRef50_Q9FH41 Cluster: Arabidopsis thaliana genomic DNA,
chromosome 5, TAC clone:K2N11; n=2; Arabidopsis
thaliana|Rep: Arabidopsis thaliana genomic DNA,
chromosome 5, TAC clone:K2N11 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 262
Score = 31.5 bits (68), Expect = 7.8
Identities = 22/57 (38%), Positives = 28/57 (49%)
Frame = +2
Query: 32 PSRPVTKFSLKKGKRKTVKAVVRRFFRLHWGGWIRTKAGRQKKMWKKSLSQKRRLRQ 202
P P+T +KK K K + RF L+ G R K G++ KS KRRLRQ
Sbjct: 99 PRTPITS-KVKKVKIKFYSSFKDRFKPLNDGTIRRWKEGKRHNAHLKSKKSKRRLRQ 154
>UniRef50_A2ZCN4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 294
Score = 31.5 bits (68), Expect = 7.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 126 PPQCNLKNLRTTALTVFLFPFLRLNLVTGLEGTGASCRI 10
PP+C KN+ + L +F + LN++TG G S +
Sbjct: 127 PPECIEKNVLSNKLDIFSLGVVMLNIITGPRGRSRSAEM 165
>UniRef50_A7AQ82 Cluster: Vps53-like family protein; n=1; Babesia
bovis|Rep: Vps53-like family protein - Babesia bovis
Length = 688
Score = 31.5 bits (68), Expect = 7.8
Identities = 11/43 (25%), Positives = 26/43 (60%)
Frame = +2
Query: 59 LKKGKRKTVKAVVRRFFRLHWGGWIRTKAGRQKKMWKKSLSQK 187
++K RK++K + R F H G W+ ++ + ++++ + +S K
Sbjct: 366 IRKEPRKSLKGALSRCFENHLGSWVSSEEVQLEELYNRIISSK 408
>UniRef50_Q0U5T7 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 490
Score = 31.5 bits (68), Expect = 7.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 122 GGWIRTKAGRQKKMWKKSLSQKRRLRQHVFCN 217
GGW + GR+K + S S + R R H F +
Sbjct: 115 GGWFNDRVGRKKALAVSSFSLRNRCRHHCFAD 146
>UniRef50_Q0UPL5 Cluster: PAB-dependent poly(A)-specific
ribonuclease subunit PAN2 (EC 3.1.13.4) (PAB1P-dependent
poly(A)-nuclease); n=2; Pezizomycotina|Rep:
PAB-dependent poly(A)-specific ribonuclease subunit PAN2
(EC 3.1.13.4) (PAB1P-dependent poly(A)-nuclease) -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 1129
Score = 31.5 bits (68), Expect = 7.8
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +1
Query: 97 AEIFQVTLGRMDQNKGWQTKKNVEKVFIPKKTIET 201
++I + ++ R DQ +GW TK N + + +KTI++
Sbjct: 663 SQILKASVERQDQTRGWCTKCNRYQQMVQRKTIQS 697
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 407,604,473
Number of Sequences: 1657284
Number of extensions: 8098597
Number of successful extensions: 23247
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 22639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23239
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21075479950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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