Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_B08
         (433 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC020651-1|AAH20651.1|  170|Homo sapiens mitochondrial ribosomal...   115   8e-26
L34081-1|AAC37550.1|  418|Homo sapiens bile acid CoA: Amino acid...    31   1.7  
CR541918-1|CAG46716.1|  418|Homo sapiens BAAT protein.                 31   1.7  
BC107424-1|AAI07425.1|  418|Homo sapiens bile acid Coenzyme A: a...    31   1.7  
BC009567-1|AAH09567.1|  418|Homo sapiens bile acid Coenzyme A: a...    31   1.7  
AL359893-6|CAH72995.1|  418|Homo sapiens bile acid Coenzyme A: a...    31   1.7  
AJ001348-1|CAA04692.1|  224|Homo sapiens CO16 protein.                 29   9.0  

>BC020651-1|AAH20651.1|  170|Homo sapiens mitochondrial ribosomal
           protein L35 protein.
          Length = 170

 Score =  115 bits (276), Expect = 8e-26
 Identities = 50/80 (62%), Positives = 64/80 (80%)
 Frame = +2

Query: 29  VPSRPVTKFSLKKGKRKTVKAVVRRFFRLHWGGWIRTKAGRQKKMWKKSLSQKRRLRQHV 208
           +P R +T FS +KGKRKTVKAV+ RF RLH G W+R KAG +KK+WKK+ ++K+RLR+ V
Sbjct: 89  LPVRSLTYFSARKGKRKTVKAVIDRFLRLHCGLWVRRKAGYKKKLWKKTPARKKRLREFV 148

Query: 209 FCNATQNTLLDKMVTKYWKR 268
           FCN TQ+ LLDKM T +WKR
Sbjct: 149 FCNKTQSKLLDKMTTSFWKR 168


>L34081-1|AAC37550.1|  418|Homo sapiens bile acid CoA: Amino acid
           N-acyltransferase protein.
          Length = 418

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 110 RLHWGGWIRTKAGRQKKMWKKSLSQKRRLRQHVFCNAT 223
           RLHWGG +   A  Q+  WK+    +R LR+H+  + T
Sbjct: 381 RLHWGGEVIPHAAAQEHAWKEI---QRFLRKHLIPDVT 415


>CR541918-1|CAG46716.1|  418|Homo sapiens BAAT protein.
          Length = 418

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 110 RLHWGGWIRTKAGRQKKMWKKSLSQKRRLRQHVFCNAT 223
           RLHWGG +   A  Q+  WK+    +R LR+H+  + T
Sbjct: 381 RLHWGGEVIPHAAAQEHAWKEI---QRFLRKHLIPDVT 415


>BC107424-1|AAI07425.1|  418|Homo sapiens bile acid Coenzyme A:
           amino acid N-acyltransferase (glycine
           N-choloyltransferas protein.
          Length = 418

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 110 RLHWGGWIRTKAGRQKKMWKKSLSQKRRLRQHVFCNAT 223
           RLHWGG +   A  Q+  WK+    +R LR+H+  + T
Sbjct: 381 RLHWGGEVIPHAAAQEHAWKEI---QRFLRKHLIPDVT 415


>BC009567-1|AAH09567.1|  418|Homo sapiens bile acid Coenzyme A:
           amino acid N-acyltransferase (glycine
           N-choloyltransferas protein.
          Length = 418

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 110 RLHWGGWIRTKAGRQKKMWKKSLSQKRRLRQHVFCNAT 223
           RLHWGG +   A  Q+  WK+    +R LR+H+  + T
Sbjct: 381 RLHWGGEVIPHAAAQEHAWKEI---QRFLRKHLIPDVT 415


>AL359893-6|CAH72995.1|  418|Homo sapiens bile acid Coenzyme A:
           amino acid N-acyltransferase (glycine
           N-choloyltransferas protein.
          Length = 418

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 110 RLHWGGWIRTKAGRQKKMWKKSLSQKRRLRQHVFCNAT 223
           RLHWGG +   A  Q+  WK+    +R LR+H+  + T
Sbjct: 381 RLHWGGEVIPHAAAQEHAWKEI---QRFLRKHLIPDVT 415


>AJ001348-1|CAA04692.1|  224|Homo sapiens CO16 protein.
          Length = 224

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
 Frame = -1

Query: 175 RLFPHFFLSASLCSDPSSPM*PEKSPHHSF---DCLPFSFLE-TKFSYRS*GHRSLVPNS 8
           ++FP FF+ A  CS   + M   K     F   + +PF +L+  K  Y + G  +L  + 
Sbjct: 131 KIFPRFFMVAKQCSAGCAAMERPKPEEKRFLLEEPMPFFYLKCCKIRYCNLGGANLSTHQ 190

Query: 7   CS 2
           CS
Sbjct: 191 CS 192


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,634,099
Number of Sequences: 237096
Number of extensions: 1265800
Number of successful extensions: 5100
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5096
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)