Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_B05
         (244 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   0.27 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   0.27 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   0.83 
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   1.9  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    20   4.4  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    20   4.4  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.8 bits (49), Expect = 0.27
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 198 PFPGLPSRTFRWY 160
           P  G PS +FRWY
Sbjct: 255 PAQGFPSPSFRWY 267


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 0.27
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 164 GTFVDTTAFVDQVTSCCG 111
           G  +DT+ FVD +  C G
Sbjct: 641 GNKIDTSLFVDHIRQCVG 658


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 0.83
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 163  PSKSSRRKPRKWVTVPSNTLGYW 231
            PS SS +KP K    P +T  +W
Sbjct: 1161 PSTSSWQKPTKPSYRPPSTTNHW 1183



 Score = 20.6 bits (41), Expect = 2.5
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +1

Query: 112  PQQLVT*STNAVVSTNVPSKSSRRKPRKWVTVPSNTLGYW 231
            P Q  T    AVV   V   S   +P ++V  P N   Y+
Sbjct: 1080 PTQGTTIPPPAVVMPEVDKPSQPCEPGQYVPDPHNCNAYY 1119



 Score = 19.4 bits (38), Expect = 5.8
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = +1

Query: 172  SSRRKPRKWVTVPSNTLGY 228
            + + KP+     P+ T+GY
Sbjct: 2205 NDKTKPKPTTMKPTTTIGY 2223


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.0 bits (42), Expect = 1.9
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +1

Query: 163 PSKSSRRKPR 192
           P+K SRRKPR
Sbjct: 257 PTKVSRRKPR 266


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 19.8 bits (39), Expect = 4.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 128 LDLQMRWYRQT 160
           L  +MRWY QT
Sbjct: 287 LTYEMRWYCQT 297


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 19.8 bits (39), Expect = 4.4
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 238 SLSNTQAYLKEPLPISWASFSNFS 167
           SLS   A     L +SW S S+ S
Sbjct: 362 SLSLASAQTLSELDLSWNSISSLS 385


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,286
Number of Sequences: 336
Number of extensions: 982
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 46
effective length of database: 107,129
effective search space used:  3642386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)