Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_B04
(237 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0832 + 25190755-25190960,25191869-25191997,25192079-251923... 29 0.70
06_03_0825 - 25109742-25110473,25110546-25110833,25110930-251109... 29 0.70
05_05_0179 + 23022985-23023190,23024099-23024227,23024309-230245... 29 0.70
04_04_0871 + 28898262-28898534,28899552-28900015,28900242-289003... 29 0.70
03_02_0226 - 6569657-6570388,6570461-6570748,6570846-6571303,657... 29 0.70
04_03_0585 + 17570853-17571404 28 0.92
01_05_0317 + 20822881-20822994,20824036-20824176,20824249-20825022 28 0.92
09_04_0179 - 15366119-15366916 28 1.2
04_01_0183 + 2079879-2080084,2080994-2081122,2081204-2081426,208... 28 1.2
11_04_0201 - 14768341-14768524,14768720-14768838 27 1.6
03_05_0944 + 29046793-29046922,29048091-29048464,29048556-290486... 27 1.6
07_03_0222 + 15352972-15353589,15355476-15355616,15355741-15355854 27 2.1
07_01_0817 + 6533316-6533849,6533996-6534064,6534528-6534767,653... 27 2.1
07_01_0070 + 515247-515397,516198-516265,516360-518456,518750-51... 27 2.8
04_03_0940 - 20943986-20944216,20944301-20944500,20944506-20944791 27 2.8
02_05_0028 + 25181440-25181758,25181865-25182160,25183902-251840... 27 2.8
02_04_0160 - 20427774-20428217,20428301-20428402,20428503-204285... 27 2.8
02_01_0003 + 13079-13610,14005-14312,14364-14549,14620-14707,148... 27 2.8
09_03_0058 + 11950668-11950701,11951068-11951106,11951586-119519... 26 3.7
10_08_1036 + 22470642-22470664,22470850-22471024,22471133-22473766 26 4.9
06_03_0912 + 25896152-25896451,25896528-25897296,25897492-258976... 26 4.9
04_04_0535 + 26072774-26073391,26074102-26074242,26074752-26074865 26 4.9
04_01_0021 + 311914-312399,314218-314310,314391-314672,314754-31... 26 4.9
03_05_0284 - 22712390-22712899,22712978-22713304,22713742-227140... 26 4.9
10_06_0154 - 11291630-11292106,11292192-11292457,11293027-112931... 25 6.5
04_03_0043 + 10076575-10076922 25 6.5
02_04_0095 - 19668323-19668496,19668585-19668758 25 6.5
01_06_1234 + 35599008-35599640,35600210-35600477,35600550-35600788 25 6.5
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773... 25 8.6
07_03_0219 + 15315556-15315729,15315909-15316154,15316238-153163... 25 8.6
07_01_1163 - 11011362-11011760,11011803-11011847,11011880-110120... 25 8.6
05_04_0129 - 18283862-18284328,18284382-18284580 25 8.6
03_02_0480 + 8785130-8785192,8785472-8785518,8786415-8786508,878... 25 8.6
01_06_0775 - 31909855-31909897,31909984-31910055,31910400-319104... 25 8.6
01_06_0549 + 30149016-30149761,30149922-30150088,30150236-301503... 25 8.6
>06_03_0832 +
25190755-25190960,25191869-25191997,25192079-25192301,
25192447-25192702,25193228-25193685,25193783-25194070,
25194143-25194874
Length = 763
Score = 28.7 bits (61), Expect = 0.70
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +1
Query: 64 DQTVRTQSRQHGRDQKEDAGDEAGEGQCHGQGRYQRTAG 180
+ T + +S+ H + +KE QC G G Y+ T G
Sbjct: 716 ESTSKDESKNHAKGKKESTKQIRYCKQCGGHGHYKSTCG 754
>06_03_0825 -
25109742-25110473,25110546-25110833,25110930-25110993,
25111855-25111912,25111913-25112168,25112310-25112532,
25112614-25112742,25113651-25113856
Length = 651
Score = 28.7 bits (61), Expect = 0.70
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +1
Query: 64 DQTVRTQSRQHGRDQKEDAGDEAGEGQCHGQGRYQRTAG 180
+ T + +S+ H + +KE QC G G Y+ T G
Sbjct: 604 ESTSKDESKNHAKGKKESTKQIRYCKQCGGHGHYKSTCG 642
>05_05_0179 +
23022985-23023190,23024099-23024227,23024309-23024531,
23024674-23024929,23025455-23025912,23026009-23026296,
23026369-23027100
Length = 763
Score = 28.7 bits (61), Expect = 0.70
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +1
Query: 64 DQTVRTQSRQHGRDQKEDAGDEAGEGQCHGQGRYQRTAG 180
+ T + +S+ H + +KE QC G G Y+ T G
Sbjct: 716 ESTSKDESKNHAKGKKESTKQIRYCKQCGGHGHYKSTCG 754
>04_04_0871 +
28898262-28898534,28899552-28900015,28900242-28900356,
28900510-28901157,28901282-28901374,28901658-28901795,
28902147-28902206
Length = 596
Score = 28.7 bits (61), Expect = 0.70
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 83 KAANMDAIKKKMQAMKLEKDNAMDKADTSEQQARDANLRAEKVNE 217
K A +KK +A + EK+ +KA S+ Q +N+R +
Sbjct: 507 KKARAKELKKLKKAREKEKEKEKEKAQASQSQRTQSNVRGTSAGQ 551
>03_02_0226 -
6569657-6570388,6570461-6570748,6570846-6571303,
6571694-6571828,6571829-6572084,6572229-6572451,
6572533-6572661,6573570-6573775
Length = 808
Score = 28.7 bits (61), Expect = 0.70
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +1
Query: 64 DQTVRTQSRQHGRDQKEDAGDEAGEGQCHGQGRYQRTAG 180
+ T + +S+ H + +KE QC G G Y+ T G
Sbjct: 761 ESTSKDESKNHAKGKKESTKQIRYCKQCGGHGHYKSTCG 799
>04_03_0585 + 17570853-17571404
Length = 183
Score = 28.3 bits (60), Expect = 0.92
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 121 GDEAGEGQCHGQGRYQRTAG*RCQPPCREGQ 213
G G+G+C+ G + + RCQ C+ GQ
Sbjct: 22 GLSRGDGECNPSGAIRSSTTHRCQDCCKAGQ 52
>01_05_0317 + 20822881-20822994,20824036-20824176,20824249-20825022
Length = 342
Score = 28.3 bits (60), Expect = 0.92
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 64 DQTVRTQSRQHGRDQKEDAGDEAGEGQCHGQGRYQRTAG 180
+ T + +S+ H + +KE QC G G Y T G
Sbjct: 281 ESTSKDESKNHAKGKKESTKQIRYCKQCGGHGHYNSTCG 319
>09_04_0179 - 15366119-15366916
Length = 265
Score = 27.9 bits (59), Expect = 1.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 94 HGRDQKEDAGDEAGEGQCHGQGRYQRTA 177
HG E G +G G+ HG+G QR A
Sbjct: 167 HGEGYGEGNGSGSGYGEGHGEGHGQRNA 194
>04_01_0183 +
2079879-2080084,2080994-2081122,2081204-2081426,
2081569-2081824,2082358-2082550,2082602-2082815,
2082912-2083025,2083284-2084000
Length = 683
Score = 27.9 bits (59), Expect = 1.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +1
Query: 64 DQTVRTQSRQHGRDQKEDAGDEAGEGQCHGQGRYQRTAG 180
+ T + +S+ H + +KE QC G G Y+ T G
Sbjct: 636 ESTSKDESKNHAKGKKESTKQIRYCKQCGGHGHYKITCG 674
>11_04_0201 - 14768341-14768524,14768720-14768838
Length = 100
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 73 VRTQSRQHGRDQKEDAGDEAGEGQCHGQGRYQR 171
+RT +RQ ++ED GD AG G G G + R
Sbjct: 70 MRTATRQRDAKREEDVGDHAGVG---GGGHWPR 99
>03_05_0944 +
29046793-29046922,29048091-29048464,29048556-29048687,
29048829-29049210,29049370-29049513,29049593-29049777,
29049925-29050051,29050603-29050676,29051071-29051147,
29051256-29051292,29051453-29051619,29051800-29051983,
29052053-29052130,29052451-29052570,29052648-29052707,
29053057-29053179,29053848-29053941,29054019-29054197,
29054737-29055039,29055373-29055474,29055553-29055693,
29055831-29055995,29056168-29056344,29056432-29056554,
29057787-29057867,29057983-29058099,29058214-29058386,
29058846-29058923,29058994-29059141,29059755-29059877,
29060015-29060071,29060145-29060255,29060382-29060573,
29060690-29060863,29061263-29061373,29061462-29061531,
29061734-29061812,29061898-29062000,29062086-29062256,
29062348-29062470,29062548-29062661,29062935-29063041,
29063117-29063168,29063245-29063351,29063589-29063703,
29063819-29063929,29064016-29064153,29064230-29064352,
29064535-29064606,29064774-29064886,29066780-29067110,
29067199-29067381,29068669-29068863,29068943-29069110,
29069208-29069340,29069511-29069595,29069726-29069765
Length = 2591
Score = 27.5 bits (58), Expect = 1.6
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 101 AIKKKMQAMKLEKDNAMDKADTSEQQARDANLRAE-KVNEEVRELQ 235
+I K+ +K DKA T++++ARD L+ E V E++ +Q
Sbjct: 816 SIGKRETGKSTKKTAPADKAKTAKEEARDLLLKEEASVREKIGHVQ 861
>07_03_0222 + 15352972-15353589,15355476-15355616,15355741-15355854
Length = 290
Score = 27.1 bits (57), Expect = 2.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 117 IFFLIASMLAALCSYGLVKINASRTGCSHGGASCRIPA 4
I +++A L A+C GLVK S +GG + + A
Sbjct: 131 ILYIVAQCLGAICGVGLVKAFQSAYFNRYGGGANTLAA 168
>07_01_0817 +
6533316-6533849,6533996-6534064,6534528-6534767,
6537747-6537965,6538041-6538133,6538231-6538332,
6538415-6538858
Length = 566
Score = 27.1 bits (57), Expect = 2.1
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +2
Query: 41 PVREAFILT---RP*EHKAANMDAIKKKMQAMKLEKDNAMDKADTSEQQARDANLRAEKV 211
P+ E F L +P + + AI + Q E+ +A+ ++QQA DA+ +A +
Sbjct: 439 PMVELFALVLGRKPNHSRGVGISAINEGAQ----ERYKVHAQAEAAQQQANDAHQQAAVL 494
Query: 212 NEEVREL 232
EEV++L
Sbjct: 495 LEEVQKL 501
>07_01_0070 +
515247-515397,516198-516265,516360-518456,518750-518900,
519883-520638,520990-521164,521303-521387
Length = 1160
Score = 26.6 bits (56), Expect = 2.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 65 TRP*EHKAANMDAIKKKMQAMKLEKDNA 148
T+P K AN+ ++ KK+Q + + KD A
Sbjct: 847 TQPKNSKLANIASLLKKLQQLSVNKDEA 874
>04_03_0940 - 20943986-20944216,20944301-20944500,20944506-20944791
Length = 238
Score = 26.6 bits (56), Expect = 2.8
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = +1
Query: 76 RTQSRQHGRDQKEDAGDEAGEGQCHGQGR 162
+ +++Q +D +E+A +E+G G G+G+
Sbjct: 203 KKEAKQAAKDAEEEAEEESGSGARGGEGK 231
>02_05_0028 +
25181440-25181758,25181865-25182160,25183902-25184042,
25184605-25184715
Length = 288
Score = 26.6 bits (56), Expect = 2.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 117 IFFLIASMLAALCSYGLVKINASRTGCSHGGAS 19
+ ++IA L A+C GLVK S +GG +
Sbjct: 130 VLYIIAQCLGAICGVGLVKGFQSSYYARYGGGA 162
>02_04_0160 -
20427774-20428217,20428301-20428402,20428503-20428595,
20428675-20428860,20428966-20429213,20429292-20429412,
20430674-20430718,20431086-20431138,20431152-20431173
Length = 437
Score = 26.6 bits (56), Expect = 2.8
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 53 AFILTRP*EH-KAANMDAIKKKMQAMKLEKDNAMDKADTSEQQARDANLRAEKVNEEVRE 229
A +L R H + + AI + Q E+ +A+ S+QQA +A+ +A + EEV++
Sbjct: 316 ALVLGRKPNHSRGVGISAINEGAQ----ERYRVHAQAEASQQQANEAHQQAAALLEEVQK 371
Query: 230 L 232
L
Sbjct: 372 L 372
>02_01_0003 +
13079-13610,14005-14312,14364-14549,14620-14707,
14807-14887,14980-15044,15357-15497,15578-15694,
15995-16237,16326-16383,18127-18224
Length = 638
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 88 RQHGRDQKEDAGDEAGEGQCHGQGRYQR 171
R+ GR EDA AG HG GR+ R
Sbjct: 126 RRPGRLGHEDARGAAGPNMRHGHGRFLR 153
>09_03_0058 +
11950668-11950701,11951068-11951106,11951586-11951982,
11952016-11952314,11953743-11956795
Length = 1273
Score = 26.2 bits (55), Expect = 3.7
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 89 ANMDAIKKKMQAMKLEKDNAMDKADTSEQQARDANLRAEK 208
+ M+ + MK+E D K D QQ+ D NLR +
Sbjct: 260 SRMEPLSCTTPEMKMETDAVQLKCDWPMQQSDDTNLRLHR 299
>10_08_1036 + 22470642-22470664,22470850-22471024,22471133-22473766
Length = 943
Score = 25.8 bits (54), Expect = 4.9
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +2
Query: 77 EHKAANMDAIKKKMQAMKLEKDNAMDKADTSEQQARDANLRAEKVNEEVRELQ 235
E + A K K+ MKLE D + +EQ+A A ++ ++R L+
Sbjct: 650 EEEEAAKGTEKSKVLLMKLEMDKLLGSLKAAEQEANAAKDDKAQLQAKLRLLE 702
>06_03_0912 +
25896152-25896451,25896528-25897296,25897492-25897658,
25898932-25901013,25901155-25901730,25904503-25905648,
25907056-25908693
Length = 2225
Score = 25.8 bits (54), Expect = 4.9
Identities = 12/52 (23%), Positives = 25/52 (48%)
Frame = +2
Query: 11 IRHEAPPCEQPVREAFILTRP*EHKAANMDAIKKKMQAMKLEKDNAMDKADT 166
+RHE + ++ + L R + ++ IKK+M + D A ++ D+
Sbjct: 98 LRHEWSSFPEKLKSRYNLPREMKKMRRRLEGIKKEMDLTSFKVDGATEEQDS 149
>04_04_0535 + 26072774-26073391,26074102-26074242,26074752-26074865
Length = 290
Score = 25.8 bits (54), Expect = 4.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -1
Query: 117 IFFLIASMLAALCSYGLVKINASRTGCSHGGAS 19
+ +++A L A+C GLVK S +GG +
Sbjct: 131 VLYIVAQSLGAICGVGLVKGFQSAFYVRYGGGA 163
>04_01_0021 +
311914-312399,314218-314310,314391-314672,314754-314826,
315273-315405,315476-315629,315763-315843,316174-316296,
316629-316787,316862-316996,317159-317254,317416-317910,
318651-318722,319496-319537
Length = 807
Score = 25.8 bits (54), Expect = 4.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 87 ALCSYGLVKINASRTGCSHGGASCR 13
+LCS+ + +S GCSHG SCR
Sbjct: 55 SLCSFFRRRAASSADGCSHGD-SCR 78
>03_05_0284 -
22712390-22712899,22712978-22713304,22713742-22714091,
22714176-22714401,22714655-22714728,22715813-22716152
Length = 608
Score = 25.8 bits (54), Expect = 4.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 121 GDEAGEGQCHGQGRYQRTAG 180
GDEA GQ G G TAG
Sbjct: 4 GDEAARGQARGDGTGDTTAG 23
>10_06_0154 -
11291630-11292106,11292192-11292457,11293027-11293131,
11293210-11293234,11293349-11293465,11293528-11294041,
11295524-11295578,11295980-11296060,11296129-11296219,
11296321-11296417,11297465-11297529,11297950-11298108,
11298208-11298455,11300667-11300835
Length = 822
Score = 25.4 bits (53), Expect = 6.5
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +2
Query: 77 EHKAANMDAIKKKMQAMKLEKDN--AMDKADTSEQQARDANLRAEKVNEEV 223
E + +++ ++ Q KL+K+N AMD + + Q + NLR + +EEV
Sbjct: 334 EPRFSSIAYVRLDSQVKKLDKENTSAMDLSSSLHQMLQKLNLRVQ--DEEV 382
>04_03_0043 + 10076575-10076922
Length = 115
Score = 25.4 bits (53), Expect = 6.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 88 RQHGRDQKEDAGDEAGEGQCHGQGR 162
RQ GR+++ + DEA + HG R
Sbjct: 79 RQSGREEERECADEAVGMEFHGSSR 103
>02_04_0095 - 19668323-19668496,19668585-19668758
Length = 115
Score = 25.4 bits (53), Expect = 6.5
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 77 EHKAANMDAIKKKMQAMKLEKDNAMDKADTSEQQARDANLRAEKVNEEVREL 232
E +AA I+K M+ KLEK+ D ++ R A + +KV + +L
Sbjct: 48 EERAAESVYIQK-MEREKLEKERRKADKDKADAAKRAAAAKGDKVKLKTNQL 98
>01_06_1234 + 35599008-35599640,35600210-35600477,35600550-35600788
Length = 379
Score = 25.4 bits (53), Expect = 6.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 93 LAALCSYGLVKINASRTGCSHGGASCRIPA 4
LAA+ +V ++A+ S GG++ RIPA
Sbjct: 14 LAAIHGIVVVAVDAAAAAVSRGGSARRIPA 43
>10_08_0829 - 20871810-20872011,20873226-20873359,20873480-20877313,
20878057-20878177,20878414-20878451,20879096-20879218,
20879308-20879505,20880270-20880356
Length = 1578
Score = 25.0 bits (52), Expect = 8.6
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 107 KKKMQAMKLEKDNAMDKADTSEQQARDANLRAEKVNEEVRELQ 235
+ ++ +L+ + +K + + +Q DAN + EV ELQ
Sbjct: 1444 RNQLMEKELDLKTSQNKDENTNKQGNDANENGDSPVNEVPELQ 1486
>07_03_0219 +
15315556-15315729,15315909-15316154,15316238-15316378,
15316478-15316588
Length = 223
Score = 25.0 bits (52), Expect = 8.6
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -1
Query: 117 IFFLIASMLAALCSYGLVKINASRTGCSHGGASCRIPA 4
+ ++ A L A+C LVK S HGG + + A
Sbjct: 65 LLYMAAQCLGAICGVALVKGFQSGLYARHGGGANELAA 102
>07_01_1163 -
11011362-11011760,11011803-11011847,11011880-11012014,
11012101-11012994
Length = 490
Score = 25.0 bits (52), Expect = 8.6
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 12 FGTRLRRVNSPFVRRL 59
FG R R+NSPF+R L
Sbjct: 213 FGIRRLRINSPFLRSL 228
>05_04_0129 - 18283862-18284328,18284382-18284580
Length = 221
Score = 25.0 bits (52), Expect = 8.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 91 QHGRDQKEDAGDEAGEGQCHGQGRYQR 171
QH R+Q+ GD+ G GQ QG ++R
Sbjct: 123 QHLREQQRAGGDQLGAGQ--EQGGHER 147
>03_02_0480 +
8785130-8785192,8785472-8785518,8786415-8786508,
8786598-8786699,8786988-8787259,8787343-8787420,
8787648-8787894
Length = 300
Score = 25.0 bits (52), Expect = 8.6
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 101 AIKKKMQAMKLEKDNAMDKADTSEQQARDANLRAEKVNEEVR 226
A KK+ +M E D+ ++D Q++RD NLRA + E R
Sbjct: 225 ASKKQGASMVEEVDHGTMESD-HVQRSRDINLRAHEQTEAPR 265
>01_06_0775 -
31909855-31909897,31909984-31910055,31910400-31910488,
31911298-31911522
Length = 142
Score = 25.0 bits (52), Expect = 8.6
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 124 DEAGEGQCHGQGRYQR 171
DE G C GQGR QR
Sbjct: 9 DEVGGDSCSGQGRRQR 24
>01_06_0549 +
30149016-30149761,30149922-30150088,30150236-30150320,
30150499-30150658
Length = 385
Score = 25.0 bits (52), Expect = 8.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 23 APPCEQPVREAFILTRP*EHKAANMDAIKKKMQAMK 130
AP +AF+ T P E A++DAI K M A++
Sbjct: 277 APLLRSKQGKAFLATVPGEVILASLDAINKVMDAVE 312
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,110,750
Number of Sequences: 37544
Number of extensions: 94371
Number of successful extensions: 444
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 444
length of database: 14,793,348
effective HSP length: 57
effective length of database: 12,653,340
effective search space used: 265720140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -