Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_B03
(327 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006762-4|AAU20835.1| 484|Caenorhabditis elegans Hypothetical ... 42 8e-05
AC006762-3|AAU20834.1| 614|Caenorhabditis elegans Hypothetical ... 42 8e-05
AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical ... 42 8e-05
AC006762-1|AAU87813.1| 514|Caenorhabditis elegans Hypothetical ... 42 8e-05
Z92780-8|CAI46553.1| 587|Caenorhabditis elegans Hypothetical pr... 28 1.8
Z81068-16|CAJ30230.1| 587|Caenorhabditis elegans Hypothetical p... 28 1.8
AC025726-6|AAK73923.2| 238|Caenorhabditis elegans Hypothetical ... 27 2.4
U88174-3|ABP57824.1| 1058|Caenorhabditis elegans Tomosyn synapti... 27 3.2
U88174-2|AAP68903.1| 1211|Caenorhabditis elegans Tomosyn synapti... 27 3.2
U88174-1|ABP57823.1| 1124|Caenorhabditis elegans Tomosyn synapti... 27 3.2
AY997306-1|AAY44303.1| 1133|Caenorhabditis elegans TOM-1 isoform... 27 3.2
AY997305-1|AAY44302.1| 1128|Caenorhabditis elegans TOM-1 isoform... 27 3.2
AY912103-1|AAX89146.1| 1058|Caenorhabditis elegans tomosyn protein. 27 3.2
AY912102-1|AAX89145.1| 1124|Caenorhabditis elegans tomosyn isofo... 27 3.2
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 26 5.6
U97007-4|AAB52297.2| 491|Caenorhabditis elegans Hypothetical pr... 26 7.4
U61952-10|AAQ01532.2| 217|Caenorhabditis elegans Hypothetical p... 26 7.4
AL132943-10|CAB81984.1| 266|Caenorhabditis elegans Hypothetical... 26 7.4
AJ131181-1|CAA10315.1| 962|Caenorhabditis elegans DAF-18 protei... 26 7.4
AF126286-1|AAD21620.1| 962|Caenorhabditis elegans PTEN phosphat... 26 7.4
AF098286-1|AAD03420.1| 962|Caenorhabditis elegans DAF-18 protein. 26 7.4
AF036706-19|AAK39284.1| 962|Caenorhabditis elegans Abnormal dau... 26 7.4
Z81465-4|CAB03866.3| 613|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical pr... 25 9.7
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 25 9.7
L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle position... 25 9.7
AL032646-13|CAA21687.3| 613|Caenorhabditis elegans Hypothetical... 25 9.7
AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical ... 25 9.7
AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane... 25 9.7
AF067608-2|AAC17653.1| 225|Caenorhabditis elegans Hypothetical ... 25 9.7
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 25 9.7
>AC006762-4|AAU20835.1| 484|Caenorhabditis elegans Hypothetical
protein Y42G9A.4c protein.
Length = 484
Score = 42.3 bits (95), Expect = 8e-05
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +2
Query: 11 LVSFKNGSKPRHLDIRMELRVLLVDSRVSRETRSLVVRVADLRQRNTAAVDHIMDACDHV 190
+ SFK G + HL +LRV+LV+S+V R T +V V + ++ VD + + D +
Sbjct: 225 VASFKPGHRIEHLKNLPDLRVILVNSKVERNTARMVQTVKERLKKFPEVVDAMFGSIDAI 284
Query: 191 AHTATQVLEK-LSSGNCEPDTEADYQ 265
+ A ++L + L N DT + Q
Sbjct: 285 SLDAAKILHRPLLEENGGGDTGSTVQ 310
>AC006762-3|AAU20834.1| 614|Caenorhabditis elegans Hypothetical
protein Y42G9A.4b protein.
Length = 614
Score = 42.3 bits (95), Expect = 8e-05
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +2
Query: 11 LVSFKNGSKPRHLDIRMELRVLLVDSRVSRETRSLVVRVADLRQRNTAAVDHIMDACDHV 190
+ SFK G + HL +LRV+LV+S+V R T +V V + ++ VD + + D +
Sbjct: 355 VASFKPGHRIEHLKNLPDLRVILVNSKVERNTARMVQTVKERLKKFPEVVDAMFGSIDAI 414
Query: 191 AHTATQVLEK-LSSGNCEPDTEADYQ 265
+ A ++L + L N DT + Q
Sbjct: 415 SLDAAKILHRPLLEENGGGDTGSTVQ 440
>AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical
protein Y42G9A.4a protein.
Length = 607
Score = 42.3 bits (95), Expect = 8e-05
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +2
Query: 11 LVSFKNGSKPRHLDIRMELRVLLVDSRVSRETRSLVVRVADLRQRNTAAVDHIMDACDHV 190
+ SFK G + HL +LRV+LV+S+V R T +V V + ++ VD + + D +
Sbjct: 348 VASFKPGHRIEHLKNLPDLRVILVNSKVERNTARMVQTVKERLKKFPEVVDAMFGSIDAI 407
Query: 191 AHTATQVLEK-LSSGNCEPDTEADYQ 265
+ A ++L + L N DT + Q
Sbjct: 408 SLDAAKILHRPLLEENGGGDTGSTVQ 433
>AC006762-1|AAU87813.1| 514|Caenorhabditis elegans Hypothetical
protein Y42G9A.4d protein.
Length = 514
Score = 42.3 bits (95), Expect = 8e-05
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +2
Query: 11 LVSFKNGSKPRHLDIRMELRVLLVDSRVSRETRSLVVRVADLRQRNTAAVDHIMDACDHV 190
+ SFK G + HL +LRV+LV+S+V R T +V V + ++ VD + + D +
Sbjct: 255 VASFKPGHRIEHLKNLPDLRVILVNSKVERNTARMVQTVKERLKKFPEVVDAMFGSIDAI 314
Query: 191 AHTATQVLEK-LSSGNCEPDTEADYQ 265
+ A ++L + L N DT + Q
Sbjct: 315 SLDAAKILHRPLLEENGGGDTGSTVQ 340
>Z92780-8|CAI46553.1| 587|Caenorhabditis elegans Hypothetical
protein F25H5.1b protein.
Length = 587
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -2
Query: 137 GGLPP*RPGSASPGTLSSRQEARVIPS 57
GG+PP P SAS S+ + A+++PS
Sbjct: 19 GGVPPSVPSSASQPPPSTTKHAKILPS 45
>Z81068-16|CAJ30230.1| 587|Caenorhabditis elegans Hypothetical
protein F25H5.1b protein.
Length = 587
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -2
Query: 137 GGLPP*RPGSASPGTLSSRQEARVIPS 57
GG+PP P SAS S+ + A+++PS
Sbjct: 19 GGVPPSVPSSASQPPPSTTKHAKILPS 45
>AC025726-6|AAK73923.2| 238|Caenorhabditis elegans Hypothetical
protein Y71G12B.22 protein.
Length = 238
Score = 27.5 bits (58), Expect = 2.4
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 188 VAHTATQVLEKLSSGNCEPDTEADYQHMAELWEMNH 295
++H + +LEK+ SGN + T+ AEL + H
Sbjct: 37 MSHGTSLILEKIMSGNRDYTTQISMNQAAELCHVAH 72
>U88174-3|ABP57824.1| 1058|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform d protein.
Length = 1058
Score = 27.1 bits (57), Expect = 3.2
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 131 DLRQRNTAAVDHIMDACDHVAHT-ATQVLEKLSSGNCEPDTEADYQHMAE 277
D RQ T VD + +H T A Q SG C P + +++HM+E
Sbjct: 201 DGRQILTGNVDGSISLYNHKKSTEAIQRTTPHGSGPCRPIQQVEWKHMSE 250
>U88174-2|AAP68903.1| 1211|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform c protein.
Length = 1211
Score = 27.1 bits (57), Expect = 3.2
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 131 DLRQRNTAAVDHIMDACDHVAHT-ATQVLEKLSSGNCEPDTEADYQHMAE 277
D RQ T VD + +H T A Q SG C P + +++HM+E
Sbjct: 201 DGRQILTGNVDGSISLYNHKKSTEAIQRTTPHGSGPCRPIQQVEWKHMSE 250
>U88174-1|ABP57823.1| 1124|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform a protein.
Length = 1124
Score = 27.1 bits (57), Expect = 3.2
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 131 DLRQRNTAAVDHIMDACDHVAHT-ATQVLEKLSSGNCEPDTEADYQHMAE 277
D RQ T VD + +H T A Q SG C P + +++HM+E
Sbjct: 236 DGRQILTGNVDGSISLYNHKKSTEAIQRTTPHGSGPCRPIQQVEWKHMSE 285
>AY997306-1|AAY44303.1| 1133|Caenorhabditis elegans TOM-1 isoform E
protein.
Length = 1133
Score = 27.1 bits (57), Expect = 3.2
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 131 DLRQRNTAAVDHIMDACDHVAHT-ATQVLEKLSSGNCEPDTEADYQHMAE 277
D RQ T VD + +H T A Q SG C P + +++HM+E
Sbjct: 236 DGRQILTGNVDGSISLYNHKKSTEAIQRTTPHGSGPCRPIQQVEWKHMSE 285
>AY997305-1|AAY44302.1| 1128|Caenorhabditis elegans TOM-1 isoform D
protein.
Length = 1128
Score = 27.1 bits (57), Expect = 3.2
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 131 DLRQRNTAAVDHIMDACDHVAHT-ATQVLEKLSSGNCEPDTEADYQHMAE 277
D RQ T VD + +H T A Q SG C P + +++HM+E
Sbjct: 236 DGRQILTGNVDGSISLYNHKKSTEAIQRTTPHGSGPCRPIQQVEWKHMSE 285
>AY912103-1|AAX89146.1| 1058|Caenorhabditis elegans tomosyn protein.
Length = 1058
Score = 27.1 bits (57), Expect = 3.2
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 131 DLRQRNTAAVDHIMDACDHVAHT-ATQVLEKLSSGNCEPDTEADYQHMAE 277
D RQ T VD + +H T A Q SG C P + +++HM+E
Sbjct: 201 DGRQILTGNVDGSISLYNHKKSTEAIQRTTPHGSGPCRPIQQVEWKHMSE 250
>AY912102-1|AAX89145.1| 1124|Caenorhabditis elegans tomosyn isoform
A protein.
Length = 1124
Score = 27.1 bits (57), Expect = 3.2
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 131 DLRQRNTAAVDHIMDACDHVAHT-ATQVLEKLSSGNCEPDTEADYQHMAE 277
D RQ T VD + +H T A Q SG C P + +++HM+E
Sbjct: 236 DGRQILTGNVDGSISLYNHKKSTEAIQRTTPHGSGPCRPIQQVEWKHMSE 285
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 26.2 bits (55), Expect = 5.6
Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = -2
Query: 164 DQQQLYSSAGGLPP-*RPGSASPG 96
D +LY SAGG PP PG A+ G
Sbjct: 607 DLSKLYQSAGGAPPGAAPGGAAGG 630
>U97007-4|AAB52297.2| 491|Caenorhabditis elegans Hypothetical
protein ZC196.6 protein.
Length = 491
Score = 25.8 bits (54), Expect = 7.4
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -2
Query: 161 QQQLYSSAGGLPP*RPGSASP-GTLSSRQEARVIPSLCPNDGA 36
++QL +SA +PP P A P LSS E + + PNDG+
Sbjct: 362 EKQLTNSAE-VPPLCPDDADPPAELSSLSEIIIQANYLPNDGS 403
>U61952-10|AAQ01532.2| 217|Caenorhabditis elegans Hypothetical
protein F42A9.9 protein.
Length = 217
Score = 25.8 bits (54), Expect = 7.4
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +3
Query: 126 WQTSGRGIQLLLITSWMLVTTLLILLHRCW 215
W + RG+Q+LLI + +L +++ W
Sbjct: 106 WTNANRGVQILLIVWTYAIYSLFLIIFLGW 135
>AL132943-10|CAB81984.1| 266|Caenorhabditis elegans Hypothetical
protein Y116F11B.14 protein.
Length = 266
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 188 VAHTATQVLEKLSSGNCEPDTEADYQHMAELWEMNH 295
++H + +LEK+ SGN T+ AEL + H
Sbjct: 65 MSHGTSLILEKIMSGNRYYTTQISMNQAAELCHVAH 100
>AJ131181-1|CAA10315.1| 962|Caenorhabditis elegans DAF-18 protein
protein.
Length = 962
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1
Query: 123 LTTRERVSRDTLESTRSTRNSILM 52
L TRE++ ++T + T+ TRN +L+
Sbjct: 892 LKTREQMVKETGKDTQKTRNHVLL 915
>AF126286-1|AAD21620.1| 962|Caenorhabditis elegans PTEN
phosphatidylinositol 3' phosphatasehomolog DAF-18
protein.
Length = 962
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1
Query: 123 LTTRERVSRDTLESTRSTRNSILM 52
L TRE++ ++T + T+ TRN +L+
Sbjct: 892 LKTREQMVKETGKDTQKTRNHVLL 915
>AF098286-1|AAD03420.1| 962|Caenorhabditis elegans DAF-18 protein.
Length = 962
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1
Query: 123 LTTRERVSRDTLESTRSTRNSILM 52
L TRE++ ++T + T+ TRN +L+
Sbjct: 892 LKTREQMVKETGKDTQKTRNHVLL 915
>AF036706-19|AAK39284.1| 962|Caenorhabditis elegans Abnormal dauer
formation protein 18 protein.
Length = 962
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1
Query: 123 LTTRERVSRDTLESTRSTRNSILM 52
L TRE++ ++T + T+ TRN +L+
Sbjct: 892 LKTREQMVKETGKDTQKTRNHVLL 915
>Z81465-4|CAB03866.3| 613|Caenorhabditis elegans Hypothetical
protein Y54E2A.1 protein.
Length = 613
Score = 25.4 bits (53), Expect = 9.7
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -3
Query: 307 CQLTVIHLPKLGHMLVISFGIRFTVATGQFLQHLCSSMSNVVTSIHDVIN 158
C TV LP + L+ SFG + Q L+H+ N +T IN
Sbjct: 351 CMYTVCWLPTIVDELLTSFGYICRTSNTQTLKHMRMGF-NALTYCQSCIN 399
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 152 AAVDHIMDACDHVAHTATQVLEKLSSGNCEPDTEADYQ 265
+A D I+D+ +A+ A V+E +PD +A YQ
Sbjct: 127 SAGDPIIDSAKRIAYGAQSVVEPEIPQPMDPDLQALYQ 164
>Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 92 VSRETRSLVVRVADLRQRNTAAVDHIMDACDHVAHTATQVLEKLSSG 232
V+R T ++ + L +R + I+D C AHT T+ E+ + G
Sbjct: 337 VTRGTNAIEAYMEFLEKRGI--LSRILDDCKDHAHTVTKDFERCTEG 381
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 152 AAVDHIMDACDHVAHTATQVLEKLSSGNCEPDTEADYQ 265
+A D I+D+ +A+ A V+E +PD +A YQ
Sbjct: 127 SAGDPIIDSAKRIAYGAQSVVEPEIPQPMDPDLQALYQ 164
>L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle positioning
protein 4 protein.
Length = 2104
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 61 GITRASCRLESVPGDALPGRQGGRP 135
G+TR +E V +A R+G RP
Sbjct: 513 GLTRTGAAIEHVANEAFSERRGARP 537
>AL032646-13|CAA21687.3| 613|Caenorhabditis elegans Hypothetical
protein Y54E2A.1 protein.
Length = 613
Score = 25.4 bits (53), Expect = 9.7
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -3
Query: 307 CQLTVIHLPKLGHMLVISFGIRFTVATGQFLQHLCSSMSNVVTSIHDVIN 158
C TV LP + L+ SFG + Q L+H+ N +T IN
Sbjct: 351 CMYTVCWLPTIVDELLTSFGYICRTSNTQTLKHMRMGF-NALTYCQSCIN 399
>AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 92 VSRETRSLVVRVADLRQRNTAAVDHIMDACDHVAHTATQVLEKLSSG 232
V+R T ++ + L +R + I+D C AHT T+ E+ + G
Sbjct: 337 VTRGTNAIEAYMEFLEKRGI--LSRILDDCKDHAHTVTKDFERCTEG 381
>AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane
matrix receptor MUP-4 protein.
Length = 2104
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 61 GITRASCRLESVPGDALPGRQGGRP 135
G+TR +E V +A R+G RP
Sbjct: 513 GLTRTGAAIEHVANEAFSERRGARP 537
>AF067608-2|AAC17653.1| 225|Caenorhabditis elegans Hypothetical
protein B0511.5 protein.
Length = 225
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 74 LLVDSRVSRETRSLVVRVADLRQRNTAAVDHIMDACDHV 190
LL D +V E S V D+R R A + H+ +HV
Sbjct: 95 LLKDIQVLAEQPSCEYEVFDVRTRRPAEIVHVNAPLEHV 133
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -1
Query: 144 LCRRSATLTTRERVSRDTLESTRSTRNSILMSK*RG 37
+C + L RER R T+E + ++ ++L K G
Sbjct: 401 MCTEAGLLALRERRMRVTMEDFQKSKENVLYRKKEG 436
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,677,087
Number of Sequences: 27780
Number of extensions: 191465
Number of successful extensions: 565
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 565
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 398409266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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