Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_B02
         (55 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   0.63 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   0.63 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    19   4.4  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.8 bits (44), Expect = 0.63
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 53  IYLFYFHNFCFYVLSK 6
           +Y+ +F NF F+V+ K
Sbjct: 155 MYVLFFVNFAFFVVVK 170


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 0.63
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 53  IYLFYFHNFCFYVLSK 6
           +Y+ +F NF F+V+ K
Sbjct: 155 MYVLFFVNFAFFVVVK 170


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 19.0 bits (37), Expect = 4.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 47  LFYFHNFCFYVL 12
           LF+FH+F   VL
Sbjct: 97  LFFFHSFMTSVL 108


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6416
Number of Sequences: 336
Number of extensions: 23
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 0
effective length of database: 122,585
effective search space used:  2083945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)