Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_A24
         (317 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1331|AAF46494.1| 4547|Drosophila melanogaster CG12139-P...    30   0.56 
AY069271-1|AAL39416.1|  305|Drosophila melanogaster GM09636p pro...    28   2.3  
AE014296-120|AAF47401.1|  995|Drosophila melanogaster CG12189-PA...    28   2.3  
AB049435-1|BAB15801.1|  995|Drosophila melanogaster dREV1 protein.     28   2.3  

>AE014298-1331|AAF46494.1| 4547|Drosophila melanogaster CG12139-PB
            protein.
          Length = 4547

 Score = 30.3 bits (65), Expect = 0.56
 Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = +1

Query: 7    RPRALTLTPCTSTTFSDIW--FDEEGKPHHTILA 102
            RPRA+ L PC  T F   W  F   GK   T +A
Sbjct: 2411 RPRAIVLDPCNGTLFFTDWGRFGTSGKIFRTTMA 2444


>AY069271-1|AAL39416.1|  305|Drosophila melanogaster GM09636p
           protein.
          Length = 305

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 135 LCV*TFDVYFDSQYRMVRFPFLIEPYV 55
           LC+  +D Y   QY  +R P L+ PYV
Sbjct: 108 LCIAEYDGYRSPQYPTLRSPPLLNPYV 134


>AE014296-120|AAF47401.1|  995|Drosophila melanogaster CG12189-PA
           protein.
          Length = 995

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 135 LCV*TFDVYFDSQYRMVRFPFLIEPYV 55
           LC+  +D Y   QY  +R P L+ PYV
Sbjct: 798 LCIAEYDGYRSPQYPTLRSPPLLNPYV 824


>AB049435-1|BAB15801.1|  995|Drosophila melanogaster dREV1 protein.
          Length = 995

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 135 LCV*TFDVYFDSQYRMVRFPFLIEPYV 55
           LC+  +D Y   QY  +R P L+ PYV
Sbjct: 798 LCIAEYDGYRSPQYPTLRSPPLLNPYV 824


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,129,817
Number of Sequences: 53049
Number of extensions: 234083
Number of successful extensions: 585
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 585
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 652945002
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)