Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_A23
         (355 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   3.3  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   3.3  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   4.3  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   4.3  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    20   7.5  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    20   9.9  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           20   9.9  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    20   9.9  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           20   9.9  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 84  DGNVPQVRYVLEW 46
           DGN P  RYV+E+
Sbjct: 901 DGNSPIKRYVIEY 913


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = +3

Query: 138 IPLILLGIRNAWKDHIGSSSAELVYGETLKLPSDFFLASSVAEVTDYSDFLSR 296
           I + LLG R  W+DH  S        E   +PS F L+ ++  V      +SR
Sbjct: 677 INIWLLGSRLDWEDHASSPL------EPSAVPSKFCLSVTLLTVATSLVIVSR 723


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 6/28 (21%), Positives = 15/28 (53%)
 Frame = +2

Query: 143 INTSWDKKRLERSYRKFLSRACIWRNFK 226
           +++ WD    ++S  K + ++  WR  +
Sbjct: 196 LSSEWDSDYTDKSNEKKIPKSSGWRKLR 223


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 143 WNDFIPVLIGV 111
           WN+F+P L G+
Sbjct: 577 WNEFLPKLKGI 587


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 177 DHIGSSSAELVYGETLKLPSDFFLASSVAEVTDYSDF 287
           D+  SSS E +  + L L +D   +SS    ++ +DF
Sbjct: 350 DNSLSSSEEKLKQDILNLRTDISSSSSSISSSEENDF 386


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 67  SPLRAGVVSRGRNMTGT 17
           SPL AG+   G +++GT
Sbjct: 221 SPLSAGLFQGGISISGT 237


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 67  SPLRAGVVSRGRNMTGT 17
           SPL AG+   G +++GT
Sbjct: 92  SPLSAGLFQGGISISGT 108


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 58  VTDLWNVSIGN*QQQLCVTPIKTGMK 135
           V DL     G   +++C   +KTG K
Sbjct: 259 VADLIATCYGGRNRKICEAFVKTGKK 284


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 67  SPLRAGVVSRGRNMTGT 17
           SPL AG+   G +++GT
Sbjct: 221 SPLSAGLFQGGISISGT 237


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,975
Number of Sequences: 438
Number of extensions: 2066
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8184330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)