BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_A22
(444 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X61923-1|CAA43925.1| 266|Homo sapiens ribosomal protein L7a pro... 128 1e-29
X52138-1|CAA36383.1| 266|Homo sapiens L7a protein protein. 128 1e-29
X06705-1|CAA29889.1| 266|Homo sapiens protein ( Human PLA-X mRN... 128 1e-29
M36072-1|AAA60282.1| 266|Homo sapiens RPL7A protein. 128 1e-29
BC105290-1|AAI05291.1| 266|Homo sapiens ribosomal protein L7a p... 128 1e-29
BC073802-1|AAH73802.1| 266|Homo sapiens ribosomal protein L7a p... 128 1e-29
BC071901-1|AAH71901.1| 266|Homo sapiens ribosomal protein L7a p... 128 1e-29
BC071900-1|AAH71900.1| 266|Homo sapiens ribosomal protein L7a p... 128 1e-29
BC023624-1|AAH23624.1| 266|Homo sapiens ribosomal protein L7a p... 128 1e-29
BC023594-1|AAH23594.1| 266|Homo sapiens ribosomal protein L7a p... 128 1e-29
BC021979-1|AAH21979.1| 266|Homo sapiens ribosomal protein L7a p... 128 1e-29
BC005128-1|AAH05128.1| 266|Homo sapiens ribosomal protein L7a p... 128 1e-29
AL158826-9|CAI12833.1| 191|Homo sapiens ribosomal protein L7a p... 128 1e-29
AL158826-8|CAI12832.1| 266|Homo sapiens ribosomal protein L7a p... 128 1e-29
BC005051-1|AAH05051.1| 203|Homo sapiens chromosome 6 open readi... 30 4.1
BC003042-1|AAH03042.1| 203|Homo sapiens chromosome 6 open readi... 30 4.1
BC000764-1|AAH00764.1| 203|Homo sapiens chromosome 6 open readi... 30 4.1
AL133211-3|CAI21541.1| 203|Homo sapiens protein ( Human DNA seq... 30 4.1
AK222701-1|BAD96421.1| 203|Homo sapiens hypothetical protein FL... 30 4.1
AK001204-1|BAA91551.1| 135|Homo sapiens protein ( Homo sapiens ... 30 4.1
>X61923-1|CAA43925.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 128 bits (308), Expect = 1e-29
Identities = 57/84 (67%), Positives = 69/84 (82%)
Frame = +3
Query: 189 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQCQKAVLQRRLKVPPPINQFTQTLDKT 368
LFEKR KNF IGQDIQP RDL+RFV+WP+YIR+Q Q+A+L +RLKVPP INQFTQ LD+
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 369 TAKGLFKILEKYRPETEAVRKERL 440
TA L K+ KYRPET+ +K+RL
Sbjct: 91 TATQLLKLAHKYRPETKQEKKQRL 114
>X52138-1|CAA36383.1| 266|Homo sapiens L7a protein protein.
Length = 266
Score = 128 bits (308), Expect = 1e-29
Identities = 57/84 (67%), Positives = 69/84 (82%)
Frame = +3
Query: 189 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQCQKAVLQRRLKVPPPINQFTQTLDKT 368
LFEKR KNF IGQDIQP RDL+RFV+WP+YIR+Q Q+A+L +RLKVPP INQFTQ LD+
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 369 TAKGLFKILEKYRPETEAVRKERL 440
TA L K+ KYRPET+ +K+RL
Sbjct: 91 TATQLLKLAHKYRPETKQEKKQRL 114
>X06705-1|CAA29889.1| 266|Homo sapiens protein ( Human PLA-X mRNA.
).
Length = 266
Score = 128 bits (308), Expect = 1e-29
Identities = 57/84 (67%), Positives = 69/84 (82%)
Frame = +3
Query: 189 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQCQKAVLQRRLKVPPPINQFTQTLDKT 368
LFEKR KNF IGQDIQP RDL+RFV+WP+YIR+Q Q+A+L +RLKVPP INQFTQ LD+
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 369 TAKGLFKILEKYRPETEAVRKERL 440
TA L K+ KYRPET+ +K+RL
Sbjct: 91 TATQLLKLAHKYRPETKQEKKQRL 114
>M36072-1|AAA60282.1| 266|Homo sapiens RPL7A protein.
Length = 266
Score = 128 bits (308), Expect = 1e-29
Identities = 57/84 (67%), Positives = 69/84 (82%)
Frame = +3
Query: 189 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQCQKAVLQRRLKVPPPINQFTQTLDKT 368
LFEKR KNF IGQDIQP RDL+RFV+WP+YIR+Q Q+A+L +RLKVPP INQFTQ LD+
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 369 TAKGLFKILEKYRPETEAVRKERL 440
TA L K+ KYRPET+ +K+RL
Sbjct: 91 TATQLLKLAHKYRPETKQEKKQRL 114
>BC105290-1|AAI05291.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 128 bits (308), Expect = 1e-29
Identities = 57/84 (67%), Positives = 69/84 (82%)
Frame = +3
Query: 189 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQCQKAVLQRRLKVPPPINQFTQTLDKT 368
LFEKR KNF IGQDIQP RDL+RFV+WP+YIR+Q Q+A+L +RLKVPP INQFTQ LD+
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 369 TAKGLFKILEKYRPETEAVRKERL 440
TA L K+ KYRPET+ +K+RL
Sbjct: 91 TATQLLKLAHKYRPETKQEKKQRL 114
>BC073802-1|AAH73802.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 128 bits (308), Expect = 1e-29
Identities = 57/84 (67%), Positives = 69/84 (82%)
Frame = +3
Query: 189 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQCQKAVLQRRLKVPPPINQFTQTLDKT 368
LFEKR KNF IGQDIQP RDL+RFV+WP+YIR+Q Q+A+L +RLKVPP INQFTQ LD+
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 369 TAKGLFKILEKYRPETEAVRKERL 440
TA L K+ KYRPET+ +K+RL
Sbjct: 91 TATQLLKLAHKYRPETKQEKKQRL 114
>BC071901-1|AAH71901.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 128 bits (308), Expect = 1e-29
Identities = 57/84 (67%), Positives = 69/84 (82%)
Frame = +3
Query: 189 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQCQKAVLQRRLKVPPPINQFTQTLDKT 368
LFEKR KNF IGQDIQP RDL+RFV+WP+YIR+Q Q+A+L +RLKVPP INQFTQ LD+
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 369 TAKGLFKILEKYRPETEAVRKERL 440
TA L K+ KYRPET+ +K+RL
Sbjct: 91 TATQLLKLAHKYRPETKQEKKQRL 114
>BC071900-1|AAH71900.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 128 bits (308), Expect = 1e-29
Identities = 57/84 (67%), Positives = 69/84 (82%)
Frame = +3
Query: 189 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQCQKAVLQRRLKVPPPINQFTQTLDKT 368
LFEKR KNF IGQDIQP RDL+RFV+WP+YIR+Q Q+A+L +RLKVPP INQFTQ LD+
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 369 TAKGLFKILEKYRPETEAVRKERL 440
TA L K+ KYRPET+ +K+RL
Sbjct: 91 TATQLLKLAHKYRPETKQEKKQRL 114
>BC023624-1|AAH23624.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 128 bits (308), Expect = 1e-29
Identities = 57/84 (67%), Positives = 69/84 (82%)
Frame = +3
Query: 189 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQCQKAVLQRRLKVPPPINQFTQTLDKT 368
LFEKR KNF IGQDIQP RDL+RFV+WP+YIR+Q Q+A+L +RLKVPP INQFTQ LD+
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 369 TAKGLFKILEKYRPETEAVRKERL 440
TA L K+ KYRPET+ +K+RL
Sbjct: 91 TATQLLKLAHKYRPETKQEKKQRL 114
>BC023594-1|AAH23594.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 128 bits (308), Expect = 1e-29
Identities = 57/84 (67%), Positives = 69/84 (82%)
Frame = +3
Query: 189 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQCQKAVLQRRLKVPPPINQFTQTLDKT 368
LFEKR KNF IGQDIQP RDL+RFV+WP+YIR+Q Q+A+L +RLKVPP INQFTQ LD+
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 369 TAKGLFKILEKYRPETEAVRKERL 440
TA L K+ KYRPET+ +K+RL
Sbjct: 91 TATQLLKLAHKYRPETKQEKKQRL 114
>BC021979-1|AAH21979.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 128 bits (308), Expect = 1e-29
Identities = 57/84 (67%), Positives = 69/84 (82%)
Frame = +3
Query: 189 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQCQKAVLQRRLKVPPPINQFTQTLDKT 368
LFEKR KNF IGQDIQP RDL+RFV+WP+YIR+Q Q+A+L +RLKVPP INQFTQ LD+
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 369 TAKGLFKILEKYRPETEAVRKERL 440
TA L K+ KYRPET+ +K+RL
Sbjct: 91 TATQLLKLAHKYRPETKQEKKQRL 114
>BC005128-1|AAH05128.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 128 bits (308), Expect = 1e-29
Identities = 57/84 (67%), Positives = 69/84 (82%)
Frame = +3
Query: 189 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQCQKAVLQRRLKVPPPINQFTQTLDKT 368
LFEKR KNF IGQDIQP RDL+RFV+WP+YIR+Q Q+A+L +RLKVPP INQFTQ LD+
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 369 TAKGLFKILEKYRPETEAVRKERL 440
TA L K+ KYRPET+ +K+RL
Sbjct: 91 TATQLLKLAHKYRPETKQEKKQRL 114
>AL158826-9|CAI12833.1| 191|Homo sapiens ribosomal protein L7a
protein.
Length = 191
Score = 128 bits (308), Expect = 1e-29
Identities = 57/84 (67%), Positives = 69/84 (82%)
Frame = +3
Query: 189 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQCQKAVLQRRLKVPPPINQFTQTLDKT 368
LFEKR KNF IGQDIQP RDL+RFV+WP+YIR+Q Q+A+L +RLKVPP INQFTQ LD+
Sbjct: 58 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 117
Query: 369 TAKGLFKILEKYRPETEAVRKERL 440
TA L K+ KYRPET+ +K+RL
Sbjct: 118 TATQLLKLAHKYRPETKQEKKQRL 141
>AL158826-8|CAI12832.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 128 bits (308), Expect = 1e-29
Identities = 57/84 (67%), Positives = 69/84 (82%)
Frame = +3
Query: 189 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQCQKAVLQRRLKVPPPINQFTQTLDKT 368
LFEKR KNF IGQDIQP RDL+RFV+WP+YIR+Q Q+A+L +RLKVPP INQFTQ LD+
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 369 TAKGLFKILEKYRPETEAVRKERL 440
TA L K+ KYRPET+ +K+RL
Sbjct: 91 TATQLLKLAHKYRPETKQEKKQRL 114
>BC005051-1|AAH05051.1| 203|Homo sapiens chromosome 6 open reading
frame 166 protein.
Length = 203
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 224 PGHPANQRSIPFRAMAEIYSHPVSKGCVTASSQSAAANQP 343
P P +R P A + P+S TA+S SAAA P
Sbjct: 19 PASPKRRRCAPLSAPTSAAASPLSAAAATAASFSAAAASP 58
>BC003042-1|AAH03042.1| 203|Homo sapiens chromosome 6 open reading
frame 166 protein.
Length = 203
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 224 PGHPANQRSIPFRAMAEIYSHPVSKGCVTASSQSAAANQP 343
P P +R P A + P+S TA+S SAAA P
Sbjct: 19 PASPKRRRCAPLSAPTSAAASPLSAAAATAASFSAAAASP 58
>BC000764-1|AAH00764.1| 203|Homo sapiens chromosome 6 open reading
frame 166 protein.
Length = 203
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 224 PGHPANQRSIPFRAMAEIYSHPVSKGCVTASSQSAAANQP 343
P P +R P A + P+S TA+S SAAA P
Sbjct: 19 PASPKRRRCAPLSAPTSAAASPLSAAAATAASFSAAAASP 58
>AL133211-3|CAI21541.1| 203|Homo sapiens protein ( Human DNA
sequence from clone RP3-486L4 on chromosome 6q14.3-16.1
Contains the 3' end of the ORC3L gene for origin
recognition ).
Length = 203
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 224 PGHPANQRSIPFRAMAEIYSHPVSKGCVTASSQSAAANQP 343
P P +R P A + P+S TA+S SAAA P
Sbjct: 19 PASPKRRRCAPLSAPTSAAASPLSAAAATAASFSAAAASP 58
>AK222701-1|BAD96421.1| 203|Homo sapiens hypothetical protein
FLJ10342 variant protein.
Length = 203
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 224 PGHPANQRSIPFRAMAEIYSHPVSKGCVTASSQSAAANQP 343
P P +R P A + P+S TA+S SAAA P
Sbjct: 19 PASPKRRRCAPLSAPTSAAASPLSAAAATAASFSAAAASP 58
>AK001204-1|BAA91551.1| 135|Homo sapiens protein ( Homo sapiens
cDNA FLJ10342 fis, clone NT2RM2000837. ).
Length = 135
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 224 PGHPANQRSIPFRAMAEIYSHPVSKGCVTASSQSAAANQP 343
P P +R P A + P+S TA+S SAAA P
Sbjct: 19 PASPKRRRCAPLSAPTSAAASPLSAAAATAASFSAAAASP 58
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,913,410
Number of Sequences: 237096
Number of extensions: 1247542
Number of successful extensions: 2555
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2555
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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