Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_A22
(444 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084159-4|AAK39366.1| 234|Caenorhabditis elegans Hypothetical ... 122 1e-28
AC006729-4|AAK84600.1| 265|Caenorhabditis elegans Ribosomal pro... 122 1e-28
AC006729-3|AAM15612.1| 245|Caenorhabditis elegans Ribosomal pro... 118 2e-27
AC084159-5|AAM69075.1| 199|Caenorhabditis elegans Hypothetical ... 95 2e-20
AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein. 31 0.50
AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein. 31 0.50
AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cel... 31 0.50
AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cel... 31 0.50
AL033514-4|CAA22094.2| 827|Caenorhabditis elegans Hypothetical ... 29 2.0
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 28 3.5
Z74476-5|CAA98965.1| 325|Caenorhabditis elegans Hypothetical pr... 27 4.6
Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical pr... 27 6.1
U61949-2|AAB03152.1| 884|Caenorhabditis elegans Puromycin-sensi... 27 6.1
U61949-1|AAY44009.1| 948|Caenorhabditis elegans Puromycin-sensi... 27 6.1
AC024881-5|AAK71415.1| 668|Caenorhabditis elegans Na/ca exchang... 27 8.1
>AC084159-4|AAK39366.1| 234|Caenorhabditis elegans Hypothetical
protein Y73B3A.18a protein.
Length = 234
Score = 122 bits (294), Expect = 1e-28
Identities = 53/85 (62%), Positives = 68/85 (80%)
Frame = +3
Query: 189 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQCQKAVLQRRLKVPPPINQFTQTLDKT 368
LFEKR +NF IGQDIQP +D++RFV+WPKYIR+Q Q A+LQ+RLKVPP INQF LD
Sbjct: 135 LFEKRARNFNIGQDIQPKKDVTRFVKWPKYIRLQRQSAILQKRLKVPPTINQFRTALDSH 194
Query: 369 TAKGLFKILEKYRPETEAVRKERLK 443
+A+ FK+L+KYRPE+ +K RL+
Sbjct: 195 SARQAFKLLDKYRPESSEAKKNRLR 219
>AC006729-4|AAK84600.1| 265|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 7A, isoform a protein.
Length = 265
Score = 122 bits (294), Expect = 1e-28
Identities = 53/85 (62%), Positives = 68/85 (80%)
Frame = +3
Query: 189 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQCQKAVLQRRLKVPPPINQFTQTLDKT 368
LFEKR +NF IGQDIQP +D++RFV+WPKYIR+Q Q A+LQ+RLKVPP INQF LD
Sbjct: 32 LFEKRARNFNIGQDIQPKKDVTRFVKWPKYIRLQRQSAILQKRLKVPPTINQFRTALDSQ 91
Query: 369 TAKGLFKILEKYRPETEAVRKERLK 443
+A+ FK+L+KYRPE+ +K RL+
Sbjct: 92 SARQAFKLLDKYRPESTEAKKNRLR 116
>AC006729-3|AAM15612.1| 245|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 7A, isoform c protein.
Length = 245
Score = 118 bits (284), Expect = 2e-27
Identities = 52/81 (64%), Positives = 65/81 (80%)
Frame = +3
Query: 189 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQCQKAVLQRRLKVPPPINQFTQTLDKT 368
LFEKR +NF IGQDIQP +D++RFV+WPKYIR+Q Q A+LQ+RLKVPP INQF LD
Sbjct: 32 LFEKRARNFNIGQDIQPKKDVTRFVKWPKYIRLQRQSAILQKRLKVPPTINQFRTALDSQ 91
Query: 369 TAKGLFKILEKYRPETEAVRK 431
+A+ FK+L+KYRPE+ V K
Sbjct: 92 SARQAFKLLDKYRPESTEVTK 112
>AC084159-5|AAM69075.1| 199|Caenorhabditis elegans Hypothetical
protein Y73B3A.18b protein.
Length = 199
Score = 95.1 bits (226), Expect = 2e-20
Identities = 41/58 (70%), Positives = 49/58 (84%)
Frame = +3
Query: 189 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQCQKAVLQRRLKVPPPINQFTQTLD 362
LFEKR +NF IGQDIQP +D++RFV+WPKYIR+Q Q A+LQ+RLKVPP INQF LD
Sbjct: 135 LFEKRARNFNIGQDIQPKKDVTRFVKWPKYIRLQRQSAILQKRLKVPPTINQFRTALD 192
>AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein.
Length = 691
Score = 30.7 bits (66), Expect = 0.50
Identities = 22/92 (23%), Positives = 39/92 (42%)
Frame = +2
Query: 119 DREKSSGRSTCGEES*AQEDCKPSIREENKELCYWPGHPANQRSIPFRAMAEIYSHPVSK 298
D ++ +T G ES QE+ P A++ S P + E+ P S
Sbjct: 31 DMDEDEDVTTDGPES--QEELAADAPAPGAPEASAPAQEASEASAPDQEAPEVQDVPDSS 88
Query: 299 GCVTASSQSAAANQPVHPDIR*NHSQRSVQDL 394
G AS+Q++ A+ P++ + + QD+
Sbjct: 89 GAPDASAQASEASDASAPEVPGSTEAQDAQDV 120
>AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein.
Length = 728
Score = 30.7 bits (66), Expect = 0.50
Identities = 22/92 (23%), Positives = 39/92 (42%)
Frame = +2
Query: 119 DREKSSGRSTCGEES*AQEDCKPSIREENKELCYWPGHPANQRSIPFRAMAEIYSHPVSK 298
D ++ +T G ES QE+ P A++ S P + E+ P S
Sbjct: 68 DMDEDEDVTTDGPES--QEELAADAPAPGAPEASAPAQEASEASAPDQEAPEVQDVPDSS 125
Query: 299 GCVTASSQSAAANQPVHPDIR*NHSQRSVQDL 394
G AS+Q++ A+ P++ + + QD+
Sbjct: 126 GAPDASAQASEASDASAPEVPGSTEAQDAQDV 157
>AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform b protein.
Length = 512
Score = 30.7 bits (66), Expect = 0.50
Identities = 22/92 (23%), Positives = 39/92 (42%)
Frame = +2
Query: 119 DREKSSGRSTCGEES*AQEDCKPSIREENKELCYWPGHPANQRSIPFRAMAEIYSHPVSK 298
D ++ +T G ES QE+ P A++ S P + E+ P S
Sbjct: 68 DMDEDEDVTTDGPES--QEELAADAPAPGAPEASAPAQEASEASAPDQEAPEVQDVPDSS 125
Query: 299 GCVTASSQSAAANQPVHPDIR*NHSQRSVQDL 394
G AS+Q++ A+ P++ + + QD+
Sbjct: 126 GAPDASAQASEASDASAPEVPGSTEAQDAQDV 157
>AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform a protein.
Length = 728
Score = 30.7 bits (66), Expect = 0.50
Identities = 22/92 (23%), Positives = 39/92 (42%)
Frame = +2
Query: 119 DREKSSGRSTCGEES*AQEDCKPSIREENKELCYWPGHPANQRSIPFRAMAEIYSHPVSK 298
D ++ +T G ES QE+ P A++ S P + E+ P S
Sbjct: 68 DMDEDEDVTTDGPES--QEELAADAPAPGAPEASAPAQEASEASAPDQEAPEVQDVPDSS 125
Query: 299 GCVTASSQSAAANQPVHPDIR*NHSQRSVQDL 394
G AS+Q++ A+ P++ + + QD+
Sbjct: 126 GAPDASAQASEASDASAPEVPGSTEAQDAQDV 157
>AL033514-4|CAA22094.2| 827|Caenorhabditis elegans Hypothetical
protein Y75B8A.3 protein.
Length = 827
Score = 28.7 bits (61), Expect = 2.0
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 291 CQKAVLQRRLKVPPPINQFTQTLDKTT 371
CQ V RL+ P P+NQF TL T
Sbjct: 72 CQAPVGNLRLQPPQPLNQFNTTLHDAT 98
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 363 KTTAKGLFKILEKYRPETEAVRKER 437
KT AK L + LEK P+ +A+R+E+
Sbjct: 3250 KTKAKELLQALEKAIPQEDAIRREQ 3274
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 363 KTTAKGLFKILEKYRPETEAVRKER 437
KT AK L + LEK P+ +A+R+E+
Sbjct: 4153 KTKAKELLQALEKAIPQEDAIRREQ 4177
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 363 KTTAKGLFKILEKYRPETEAVRKER 437
KT AK L + LEK P+ +A+R+E+
Sbjct: 5107 KTKAKELLQALEKAIPQEDAIRREQ 5131
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 363 KTTAKGLFKILEKYRPETEAVRKER 437
KT AK L + LEK P+ +A+R+E+
Sbjct: 6010 KTKAKELLQALEKAIPQEDAIRREQ 6034
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 363 KTTAKGLFKILEKYRPETEAVRKER 437
KT AK L + LEK P+ +A+R+E+
Sbjct: 6913 KTKAKELLQALEKAIPQEDAIRREQ 6937
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 363 KTTAKGLFKILEKYRPETEAVRKER 437
KT AK L + LEK P+ +A+R+E+
Sbjct: 7816 KTKAKELLQALEKAIPQEDAIRREQ 7840
>Z74476-5|CAA98965.1| 325|Caenorhabditis elegans Hypothetical
protein W05B10.5 protein.
Length = 325
Score = 27.5 bits (58), Expect = 4.6
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = -3
Query: 244 LVGWMSWPIAKF--FVLFSNRGFTIF 173
LVGW +W I F +L SNR F +F
Sbjct: 97 LVGWFAWCIGPFSQVLLTSNRIFAVF 122
>Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical
protein C36A4.8 protein.
Length = 547
Score = 27.1 bits (57), Expect = 6.1
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = +2
Query: 125 EKSSGRSTCGEES*AQEDCKPSIREENKELCYWPGHPANQRSIPFRAMAEIYSHPVSKGC 304
E S G E+ A C S+R K LC + RSI ++ A +Y+ +++ C
Sbjct: 332 EDSEGELQIDEDDLANVTCATSVRNIGKSLC--AEYIREGRSISQKSTAYLYA--IARKC 387
Query: 305 VTASSQ 322
V Q
Sbjct: 388 VIVGRQ 393
>U61949-2|AAB03152.1| 884|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform a
protein.
Length = 884
Score = 27.1 bits (57), Expect = 6.1
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 203 NKELCYWPGHPANQRSIPFRAMAEIYSHPVSKGCVTASSQSAAAN 337
N+ LCY+ P Q+ + YS+ V++ TA S+++ N
Sbjct: 406 NRMLCYYLSEPVFQKGLRLYLKRFQYSNAVTQDLWTALSEASGQN 450
>U61949-1|AAY44009.1| 948|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform b
protein.
Length = 948
Score = 27.1 bits (57), Expect = 6.1
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 203 NKELCYWPGHPANQRSIPFRAMAEIYSHPVSKGCVTASSQSAAAN 337
N+ LCY+ P Q+ + YS+ V++ TA S+++ N
Sbjct: 470 NRMLCYYLSEPVFQKGLRLYLKRFQYSNAVTQDLWTALSEASGQN 514
>AC024881-5|AAK71415.1| 668|Caenorhabditis elegans Na/ca exchangers
protein 10 protein.
Length = 668
Score = 26.6 bits (56), Expect = 8.1
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -3
Query: 442 FRRSFLTASVSGLYFSKILNRPLAVVLSNVWVNWLIGGG 326
F + + A++ G FSK+ +RP + ++ + LIG G
Sbjct: 554 FPKMAMAAAIGGPLFSKLYSRPCQIKITTYISDLLIGFG 592
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,653,314
Number of Sequences: 27780
Number of extensions: 181367
Number of successful extensions: 438
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 438
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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