Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_A18
(403 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69181-1|CAA48925.1| 121|Homo sapiens ribosomal protein L31 pro... 86 5e-17
X15940-1|CAA34066.1| 125|Homo sapiens protein ( Human mRNA for ... 86 5e-17
BC070373-1|AAH70373.1| 125|Homo sapiens ribosomal protein L31 p... 86 5e-17
BC070210-1|AAH70210.1| 121|Homo sapiens RPL31 protein protein. 86 5e-17
BC017343-1|AAH17343.1| 125|Homo sapiens ribosomal protein L31 p... 86 5e-17
AC016738-2|AAY14823.1| 125|Homo sapiens unknown protein. 86 5e-17
AB061830-1|BAB79468.1| 125|Homo sapiens ribosomal protein L31 p... 86 5e-17
AB007180-1|BAA25839.1| 47|Homo sapiens ribosomal protein L31 p... 38 0.013
AB061683-1|BAB85807.1| 2849|Homo sapiens polycystin-1L1 protein. 30 3.3
>X69181-1|CAA48925.1| 121|Homo sapiens ribosomal protein L31
protein.
Length = 121
Score = 85.8 bits (203), Expect = 5e-17
Identities = 36/60 (60%), Positives = 47/60 (78%)
Frame = +1
Query: 223 RFAEKQMGTPDVRVDTRLNKYLWSKGVRNVPFXXXXXXXXXXNDDEDSAHQLFTLVTYVP 402
+FA K+MGTPDVR+DTRLNK +W+KG+RNVP+ N+DEDS ++L+TLVTYVP
Sbjct: 47 KFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVP 106
Score = 75.8 bits (178), Expect = 5e-14
Identities = 34/43 (79%), Positives = 40/43 (93%), Gaps = 1/43 (2%)
Frame = +2
Query: 86 KPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIK 211
K GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+K
Sbjct: 1 KKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALK 43
>X15940-1|CAA34066.1| 125|Homo sapiens protein ( Human mRNA for
ribosomal protein L31. ).
Length = 125
Score = 85.8 bits (203), Expect = 5e-17
Identities = 36/60 (60%), Positives = 47/60 (78%)
Frame = +1
Query: 223 RFAEKQMGTPDVRVDTRLNKYLWSKGVRNVPFXXXXXXXXXXNDDEDSAHQLFTLVTYVP 402
+FA K+MGTPDVR+DTRLNK +W+KG+RNVP+ N+DEDS ++L+TLVTYVP
Sbjct: 51 KFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVP 110
Score = 77.4 bits (182), Expect = 2e-14
Identities = 35/44 (79%), Positives = 41/44 (93%), Gaps = 1/44 (2%)
Frame = +2
Query: 83 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIK 211
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+K
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALK 47
>BC070373-1|AAH70373.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 85.8 bits (203), Expect = 5e-17
Identities = 36/60 (60%), Positives = 47/60 (78%)
Frame = +1
Query: 223 RFAEKQMGTPDVRVDTRLNKYLWSKGVRNVPFXXXXXXXXXXNDDEDSAHQLFTLVTYVP 402
+FA K+MGTPDVR+DTRLNK +W+KG+RNVP+ N+DEDS ++L+TLVTYVP
Sbjct: 51 KFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVP 110
Score = 77.4 bits (182), Expect = 2e-14
Identities = 35/44 (79%), Positives = 41/44 (93%), Gaps = 1/44 (2%)
Frame = +2
Query: 83 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIK 211
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+K
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALK 47
>BC070210-1|AAH70210.1| 121|Homo sapiens RPL31 protein protein.
Length = 121
Score = 85.8 bits (203), Expect = 5e-17
Identities = 36/60 (60%), Positives = 47/60 (78%)
Frame = +1
Query: 223 RFAEKQMGTPDVRVDTRLNKYLWSKGVRNVPFXXXXXXXXXXNDDEDSAHQLFTLVTYVP 402
+FA K+MGTPDVR+DTRLNK +W+KG+RNVP+ N+DEDS ++L+TLVTYVP
Sbjct: 51 KFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVP 110
Score = 77.4 bits (182), Expect = 2e-14
Identities = 35/44 (79%), Positives = 41/44 (93%), Gaps = 1/44 (2%)
Frame = +2
Query: 83 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIK 211
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+K
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALK 47
>BC017343-1|AAH17343.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 85.8 bits (203), Expect = 5e-17
Identities = 36/60 (60%), Positives = 47/60 (78%)
Frame = +1
Query: 223 RFAEKQMGTPDVRVDTRLNKYLWSKGVRNVPFXXXXXXXXXXNDDEDSAHQLFTLVTYVP 402
+FA K+MGTPDVR+DTRLNK +W+KG+RNVP+ N+DEDS ++L+TLVTYVP
Sbjct: 51 KFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVP 110
Score = 77.4 bits (182), Expect = 2e-14
Identities = 35/44 (79%), Positives = 41/44 (93%), Gaps = 1/44 (2%)
Frame = +2
Query: 83 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIK 211
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+K
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALK 47
>AC016738-2|AAY14823.1| 125|Homo sapiens unknown protein.
Length = 125
Score = 85.8 bits (203), Expect = 5e-17
Identities = 36/60 (60%), Positives = 47/60 (78%)
Frame = +1
Query: 223 RFAEKQMGTPDVRVDTRLNKYLWSKGVRNVPFXXXXXXXXXXNDDEDSAHQLFTLVTYVP 402
+FA K+MGTPDVR+DTRLNK +W+KG+RNVP+ N+DEDS ++L+TLVTYVP
Sbjct: 51 KFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVP 110
Score = 77.4 bits (182), Expect = 2e-14
Identities = 35/44 (79%), Positives = 41/44 (93%), Gaps = 1/44 (2%)
Frame = +2
Query: 83 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIK 211
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+K
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALK 47
>AB061830-1|BAB79468.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 85.8 bits (203), Expect = 5e-17
Identities = 36/60 (60%), Positives = 47/60 (78%)
Frame = +1
Query: 223 RFAEKQMGTPDVRVDTRLNKYLWSKGVRNVPFXXXXXXXXXXNDDEDSAHQLFTLVTYVP 402
+FA K+MGTPDVR+DTRLNK +W+KG+RNVP+ N+DEDS ++L+TLVTYVP
Sbjct: 51 KFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVP 110
Score = 77.4 bits (182), Expect = 2e-14
Identities = 35/44 (79%), Positives = 41/44 (93%), Gaps = 1/44 (2%)
Frame = +2
Query: 83 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIK 211
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+K
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALK 47
>AB007180-1|BAA25839.1| 47|Homo sapiens ribosomal protein L31
protein.
Length = 47
Score = 37.9 bits (84), Expect = 0.013
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +1
Query: 307 NVPFXXXXXXXXXXNDDEDSAHQLFTLVTYVP 402
NVP+ N+DEDS ++L+TLVTYVP
Sbjct: 1 NVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVP 32
>AB061683-1|BAB85807.1| 2849|Homo sapiens polycystin-1L1 protein.
Length = 2849
Score = 29.9 bits (64), Expect = 3.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 246 THLFFSESRGSPLIARGARFLKP 178
THLFFS + SP++ RG + P
Sbjct: 788 THLFFSRTTSSPIVLRGTQSFDP 810
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,690,129
Number of Sequences: 237096
Number of extensions: 1417896
Number of successful extensions: 2929
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2929
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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