Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_A17
(482 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81029-7|CAB02698.2| 366|Caenorhabditis elegans Hypothetical pr... 31 0.33
Z38016-1|CAA86114.1| 856|Caenorhabditis elegans serine/threonin... 29 1.3
Z32673-1|CAA83585.1| 472|Caenorhabditis elegans transcription f... 29 1.3
U41535-12|AAK67251.1| 438|Caenorhabditis elegans Abnormal cell ... 29 1.3
AL117207-1|CAB60406.1| 856|Caenorhabditis elegans Hypothetical ... 29 1.3
AJ130957-1|CAA10262.1| 438|Caenorhabditis elegans LIN-26B protein. 29 1.3
AC006631-1|AAF39793.2| 787|Caenorhabditis elegans Hypothetical ... 29 2.3
AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical ... 29 2.3
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 28 3.1
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 4.1
U55374-7|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated p... 28 4.1
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 28 4.1
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 28 4.1
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 28 4.1
Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical p... 27 5.4
Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical p... 27 5.4
Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical p... 27 5.4
Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical p... 27 5.4
Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical pr... 27 5.4
AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor prote... 27 5.4
AC024204-2|ABA00163.1| 272|Caenorhabditis elegans Hypothetical ... 27 5.4
AC006805-1|AAK68515.1| 129|Caenorhabditis elegans Hypothetical ... 27 5.4
Z68215-2|CAA92451.2| 452|Caenorhabditis elegans Hypothetical pr... 27 7.1
U50197-7|AAM54189.1| 796|Caenorhabditis elegans Abnormal dauer ... 27 7.1
U50197-6|AAK68348.1| 892|Caenorhabditis elegans Abnormal dauer ... 27 7.1
U50197-5|AAM54188.1| 864|Caenorhabditis elegans Abnormal dauer ... 27 7.1
AF005205-1|AAB61748.1| 796|Caenorhabditis elegans DAF-3 protein. 27 7.1
AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical ... 27 7.1
Z78059-2|CAH04726.2| 538|Caenorhabditis elegans Hypothetical pr... 27 9.4
>Z81029-7|CAB02698.2| 366|Caenorhabditis elegans Hypothetical
protein C01A2.3 protein.
Length = 366
Score = 31.5 bits (68), Expect = 0.33
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 82 VISASINRK--MISTPIMFENPVVHMQKVLSEVNHLREEESKLRHENLQLKEELLLVRQ 252
+++A++ + +I P+M + V E+N R+ + R EN QL ++ +L+ Q
Sbjct: 110 IVAATVTLRALLIGVPVMSQKLVAKQSMYRKEMNEFRDRIDEARKENNQLLQQQILLEQ 168
>Z38016-1|CAA86114.1| 856|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 856
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -2
Query: 325 STRLVAPSPVRRNGHAPRGLRR 260
ST+L +P+PVRR G +PR RR
Sbjct: 316 STKLDSPTPVRRIGESPRVQRR 337
>Z32673-1|CAA83585.1| 472|Caenorhabditis elegans transcription
factor protein.
Length = 472
Score = 29.5 bits (63), Expect = 1.3
Identities = 23/93 (24%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Frame = +1
Query: 49 NEAATKLKDDEVISASINRKMISTPIMFENPVVHMQK--VLSEVNHLREEESKLRHENLQ 222
++ A L +V +SI +++ T NP+ + LS++ L EE+ K+ N+Q
Sbjct: 128 DKIAANLSTKKVSPSSIEKQLQRTS---HNPLHQLSTPHALSQLQKLLEEQHKINQMNIQ 184
Query: 223 LKE---ELLLVRQMAIGEGRVARA-HSYGPEKV 309
KE + ++++ + + A+ HS+G E++
Sbjct: 185 KKEQERQQAEIQRILLQQANAAQINHSFGLERL 217
>U41535-12|AAK67251.1| 438|Caenorhabditis elegans Abnormal cell
lineage protein 26 protein.
Length = 438
Score = 29.5 bits (63), Expect = 1.3
Identities = 23/93 (24%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Frame = +1
Query: 49 NEAATKLKDDEVISASINRKMISTPIMFENPVVHMQK--VLSEVNHLREEESKLRHENLQ 222
++ A L +V +SI +++ T NP+ + LS++ L EE+ K+ N+Q
Sbjct: 94 DKIAANLSTKKVSPSSIEKQLQRTS---HNPLHQLSTPHALSQLQKLLEEQHKINQMNIQ 150
Query: 223 LKE---ELLLVRQMAIGEGRVARA-HSYGPEKV 309
KE + ++++ + + A+ HS+G E++
Sbjct: 151 KKEQERQQAEIQRILLQQANAAQINHSFGLERL 183
>AL117207-1|CAB60406.1| 856|Caenorhabditis elegans Hypothetical
protein Y60A3A.1 protein.
Length = 856
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -2
Query: 325 STRLVAPSPVRRNGHAPRGLRR 260
ST+L +P+PVRR G +PR RR
Sbjct: 316 STKLDSPTPVRRIGESPRVQRR 337
>AJ130957-1|CAA10262.1| 438|Caenorhabditis elegans LIN-26B protein.
Length = 438
Score = 29.5 bits (63), Expect = 1.3
Identities = 23/93 (24%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Frame = +1
Query: 49 NEAATKLKDDEVISASINRKMISTPIMFENPVVHMQK--VLSEVNHLREEESKLRHENLQ 222
++ A L +V +SI +++ T NP+ + LS++ L EE+ K+ N+Q
Sbjct: 94 DKIAANLSTKKVSPSSIEKQLQRTS---HNPLHQLSTPHALSQLQKLLEEQHKINQMNIQ 150
Query: 223 LKE---ELLLVRQMAIGEGRVARA-HSYGPEKV 309
KE + ++++ + + A+ HS+G E++
Sbjct: 151 KKEQERQQAEIQRILLQQANAAQINHSFGLERL 183
>AC006631-1|AAF39793.2| 787|Caenorhabditis elegans Hypothetical
protein F27B3.5 protein.
Length = 787
Score = 28.7 bits (61), Expect = 2.3
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +1
Query: 52 EAATKLKD-DEVISASINRKMISTPIMFENPVVHMQKVLSE-VNHLREEESKLRHENLQL 225
E KLK+ +E +S S R +ST + ++ + +E + + R++ +KLR+E QL
Sbjct: 516 EKGKKLKEINEKVSNS--RDQLSTKVFELKLQLNRELETAETLKNERKDSAKLRNEVNQL 573
Query: 226 KEELLLVRQMAIG 264
K++L R++A G
Sbjct: 574 KDQLEREREIAYG 586
>AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical
protein C09E7.7 protein.
Length = 995
Score = 28.7 bits (61), Expect = 2.3
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +1
Query: 52 EAATKLKD-DEVISASINRKMISTPIMFENPVVHMQKVLSE-VNHLREEESKLRHENLQL 225
E KLK+ +E +S S R +ST + ++ + +E + + R++ +KLR+E QL
Sbjct: 723 EKGKKLKEINEKVSNS--RDQLSTKVFELKLQLNRELETAETLKNERKDSAKLRNEVNQL 780
Query: 226 KEELLLVRQMAIG 264
K++L R++A G
Sbjct: 781 KDQLEREREIAYG 793
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 28.3 bits (60), Expect = 3.1
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +3
Query: 135 KSCCTYAKGIIRSKSSKRGGEQITTR----KSSIKRGVTPRAPNGDRRRPRGACP 287
+S + + G RS+S +R + R +S I+RG PR DR RP P
Sbjct: 35 RSSSSSSSGRSRSRSPRRRDTRPPARGGRSRSPIRRGSPPRGARADRDRPMRPSP 89
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.9 bits (59), Expect = 4.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 168 RSKSSKRGGEQITTRKSSIKRGVTPRAPNGDRRRPR 275
R S +RG + TR+S +R +P A GDRR R
Sbjct: 218 RRGSPRRGSPRRDTRRSPPRRRGSPPARGGDRRDRR 253
>U55374-7|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated
protein 2, isoform d protein.
Length = 286
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 319 RLVAPSPVRRNGHAPRGLRRSPFGARGVTPLLIED 215
R PSP R GH PR SP +R + I D
Sbjct: 3 RASPPSPAERYGHPPRYRTESPPSSRSEYQMSIRD 37
>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 319 RLVAPSPVRRNGHAPRGLRRSPFGARGVTPLLIED 215
R PSP R GH PR SP +R + I D
Sbjct: 1643 RASPPSPAERYGHPPRYRTESPPSSRSEYQMSIRD 1677
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 319 RLVAPSPVRRNGHAPRGLRRSPFGARGVTPLLIED 215
R PSP R GH PR SP +R + I D
Sbjct: 1744 RASPPSPAERYGHPPRYRTESPPSSRSEYQMSIRD 1778
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 319 RLVAPSPVRRNGHAPRGLRRSPFGARGVTPLLIED 215
R PSP R GH PR SP +R + I D
Sbjct: 1744 RASPPSPAERYGHPPRYRTESPPSSRSEYQMSIRD 1778
>Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 169 EVNHLREEESKLRHENLQLKEEL 237
EV+ LRE +KL+ EN QLK+E+
Sbjct: 1051 EVDVLRETVNKLKTENKQLKKEV 1073
>Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 169 EVNHLREEESKLRHENLQLKEEL 237
EV+ LRE +KL+ EN QLK+E+
Sbjct: 1085 EVDVLRETVNKLKTENKQLKKEV 1107
>Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 169 EVNHLREEESKLRHENLQLKEEL 237
EV+ LRE +KL+ EN QLK+E+
Sbjct: 1022 EVDVLRETVNKLKTENKQLKKEV 1044
>Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 169 EVNHLREEESKLRHENLQLKEEL 237
EV+ LRE +KL+ EN QLK+E+
Sbjct: 1156 EVDVLRETVNKLKTENKQLKKEV 1178
>Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical protein
F45E10.1b protein.
Length = 1549
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 169 EVNHLREEESKLRHENLQLKEEL 237
EV+ LRE +KL+ EN QLK+E+
Sbjct: 1051 EVDVLRETVNKLKTENKQLKKEV 1073
>Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical protein
F45E10.1a protein.
Length = 1583
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 169 EVNHLREEESKLRHENLQLKEEL 237
EV+ LRE +KL+ EN QLK+E+
Sbjct: 1085 EVDVLRETVNKLKTENKQLKKEV 1107
>Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical protein
F45E10.1d protein.
Length = 1520
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 169 EVNHLREEESKLRHENLQLKEEL 237
EV+ LRE +KL+ EN QLK+E+
Sbjct: 1022 EVDVLRETVNKLKTENKQLKKEV 1044
>Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical protein
F45E10.1c protein.
Length = 1654
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 169 EVNHLREEESKLRHENLQLKEEL 237
EV+ LRE +KL+ EN QLK+E+
Sbjct: 1156 EVDVLRETVNKLKTENKQLKKEV 1178
>Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical
protein F45E10.1e protein.
Length = 1234
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 169 EVNHLREEESKLRHENLQLKEEL 237
EV+ LRE +KL+ EN QLK+E+
Sbjct: 736 EVDVLRETVNKLKTENKQLKKEV 758
>AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor protein
UNC-53 protein.
Length = 1583
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 169 EVNHLREEESKLRHENLQLKEEL 237
EV+ LRE +KL+ EN QLK+E+
Sbjct: 1085 EVDVLRETVNKLKTENKQLKKEV 1107
>AC024204-2|ABA00163.1| 272|Caenorhabditis elegans Hypothetical
protein Y73B6A.6 protein.
Length = 272
Score = 27.5 bits (58), Expect = 5.4
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +1
Query: 58 ATKLKDDEVISASINRKMISTPIMFENPVVHMQKVLS--EVNHLREEESKLRHENLQLKE 231
++K+ D + K + I+ ++P+ +++ L+ E+ LRE K ENL+ +
Sbjct: 187 SSKIDRDSYLHGFNRAKNSDSSILGKHPMARIRRDLTNEELLKLRESRKKCYDENLKAGK 246
Query: 232 ELLLVRQMAI 261
L +V+ + +
Sbjct: 247 SLFIVKDINV 256
>AC006805-1|AAK68515.1| 129|Caenorhabditis elegans Hypothetical
protein Y54B9A.1 protein.
Length = 129
Score = 27.5 bits (58), Expect = 5.4
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +3
Query: 207 TRKSSIKRGVTPRAPNGDRRRPRGACPFLRTGEGATSRVDAMAGNRHRYGGHR 365
TR+ +RG T R RG T G T R + G HR HR
Sbjct: 39 TRRGETRRGETHRGETHRGETHRGETHRGETHRGETHRGETYRGETHRGETHR 91
>Z68215-2|CAA92451.2| 452|Caenorhabditis elegans Hypothetical
protein C53B4.2 protein.
Length = 452
Score = 27.1 bits (57), Expect = 7.1
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +1
Query: 94 SINRKMISTPIMFENPVVHMQKVLSEVNHLREEESKLRHENLQLKEELLLVRQMAIGEG 270
S++RKM T PVV VLS + +E+E+K + + KEE ++ GEG
Sbjct: 58 SVSRKMRRTKQPVVQPVVQKAAVLSPPDK-KEKENKKDEKKDEKKEEKKEEKKEEKGEG 115
>U50197-7|AAM54189.1| 796|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform c protein.
Length = 796
Score = 27.1 bits (57), Expect = 7.1
Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Frame = +3
Query: 81 SNICINKQKNDIDTDYV*KSCCTYAKGIIRSKSSKRGGEQITTRKSSIKRG--VTPRAPN 254
+ + +N KN+ID ++ K+C + K + K+ + + K + G PR +
Sbjct: 129 NRLSLNLVKNNIDREFDQKACESLVKKLKDKKNDLQNLIDVVLSKGTKYTGCITIPRTLD 188
Query: 255 GDRRRPRGACPFLRTGEGATSRVDAMAGNRHRYGGHRYNRWEI 383
G R + G F G R + M N R+ H + +E+
Sbjct: 189 G-RLQVHGRKGFPHVVYGKLWRFNEMTKNETRHVDHCKHAFEM 230
>U50197-6|AAK68348.1| 892|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform a protein.
Length = 892
Score = 27.1 bits (57), Expect = 7.1
Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Frame = +3
Query: 81 SNICINKQKNDIDTDYV*KSCCTYAKGIIRSKSSKRGGEQITTRKSSIKRG--VTPRAPN 254
+ + +N KN+ID ++ K+C + K + K+ + + K + G PR +
Sbjct: 225 NRLSLNLVKNNIDREFDQKACESLVKKLKDKKNDLQNLIDVVLSKGTKYTGCITIPRTLD 284
Query: 255 GDRRRPRGACPFLRTGEGATSRVDAMAGNRHRYGGHRYNRWEI 383
G R + G F G R + M N R+ H + +E+
Sbjct: 285 G-RLQVHGRKGFPHVVYGKLWRFNEMTKNETRHVDHCKHAFEM 326
>U50197-5|AAM54188.1| 864|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform b protein.
Length = 864
Score = 27.1 bits (57), Expect = 7.1
Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Frame = +3
Query: 81 SNICINKQKNDIDTDYV*KSCCTYAKGIIRSKSSKRGGEQITTRKSSIKRG--VTPRAPN 254
+ + +N KN+ID ++ K+C + K + K+ + + K + G PR +
Sbjct: 191 NRLSLNLVKNNIDREFDQKACESLVKKLKDKKNDLQNLIDVVLSKGTKYTGCITIPRTLD 250
Query: 255 GDRRRPRGACPFLRTGEGATSRVDAMAGNRHRYGGHRYNRWEI 383
G R + G F G R + M N R+ H + +E+
Sbjct: 251 G-RLQVHGRKGFPHVVYGKLWRFNEMTKNETRHVDHCKHAFEM 292
>AF005205-1|AAB61748.1| 796|Caenorhabditis elegans DAF-3 protein.
Length = 796
Score = 27.1 bits (57), Expect = 7.1
Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Frame = +3
Query: 81 SNICINKQKNDIDTDYV*KSCCTYAKGIIRSKSSKRGGEQITTRKSSIKRG--VTPRAPN 254
+ + +N KN+ID ++ K+C + K + K+ + + K + G PR +
Sbjct: 129 NRLSLNLVKNNIDREFDQKACESLVKKLKDKKNDLQNLIDVVLSKGTKYTGCITIPRTLD 188
Query: 255 GDRRRPRGACPFLRTGEGATSRVDAMAGNRHRYGGHRYNRWEI 383
G R + G F G R + M N R+ H + +E+
Sbjct: 189 G-RLQVHGRKGFPHVVYGKLWRFNEMTKNETRHVDHCKHAFEM 230
>AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical
protein Y54E10A.11 protein.
Length = 1446
Score = 27.1 bits (57), Expect = 7.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 49 NEAATKLKDDEVISASINRKMISTPIM 129
N AA K +D + S NR+ +S P+M
Sbjct: 1121 NAAALKSNEDSELPVSTNRRKLSLPVM 1147
>Z78059-2|CAH04726.2| 538|Caenorhabditis elegans Hypothetical
protein C34B4.4 protein.
Length = 538
Score = 26.6 bits (56), Expect = 9.4
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +1
Query: 157 KVLSEVNHLREEESKLRHENLQLKEELLLVRQMAIGEGRVARAHSYGPEKV 309
+++S + H R E K +++++ +E + + V AH Y PEK+
Sbjct: 295 RIISYIKHDRYELDKFNNDHVKDLQEFISGAERGDSGDLVIDAHIYWPEKM 345
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,990,504
Number of Sequences: 27780
Number of extensions: 259783
Number of successful extensions: 910
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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