Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_A16
(391 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 31 0.048
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 29 0.34
SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFII... 28 0.44
SPBC2F12.12c |||conserved eukaryotic protein|Schizosaccharomyces... 27 1.4
SPBC83.19c |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 1.4
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 27 1.4
SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr 2|... 26 1.8
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 1.8
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 26 1.8
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 3.1
SPAPB8E5.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 3.1
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 25 5.5
SPAC17A2.11 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 24 7.2
SPBP4H10.11c |||long-chain-fatty-acid-CoA ligase |Schizosaccharo... 24 9.5
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 24 9.5
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 24 9.5
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 31.5 bits (68), Expect = 0.048
Identities = 18/54 (33%), Positives = 32/54 (59%)
Frame = +3
Query: 177 PIATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLR 338
P A + EL QK+ E +E + + R+ L K+ L+ +D+E+V+QE ++ R
Sbjct: 1740 PKAVQYELLQKRRKELEEFMSSEQERIGFL-KSQLESNNDSEEVRQEYEELTKR 1792
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 28.7 bits (61), Expect = 0.34
Identities = 14/52 (26%), Positives = 30/52 (57%)
Frame = +3
Query: 180 IATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVL 335
+A +L ++ ++ D+E LRL+L LQ+ + + +Q+ Q + D+V+
Sbjct: 412 MAKSDKLLMQQQSQQTGDLETLRLQLQALQEELRVEREERQQLIQMSEDLVI 463
>SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFIID
complex subunit Taf111|Schizosaccharomyces pombe|chr
1|||Manual
Length = 979
Score = 28.3 bits (60), Expect = 0.44
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Frame = +3
Query: 177 PIATETELAQKKANETKEDVEGLRLRL----SDLQKNILKIESDAEQVKQEA 320
PI+T T+ ++ AN ++ + +GL L +D +KNI+ ESD + Q +
Sbjct: 245 PISTHTKKRRRTANTSQRN-DGLDLNTVFTTNDWEKNIIYDESDVNKTNQSS 295
>SPBC2F12.12c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 26.6 bits (56), Expect = 1.4
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +3
Query: 174 IPIATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESD 296
+P + ++++ ETKE E LRL L++ I+++++D
Sbjct: 42 LPRVRDAMKEEERSRETKEMQEREFLRLQQLRRAIIRLKND 82
>SPBC83.19c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 119
Score = 26.6 bits (56), Expect = 1.4
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -2
Query: 273 FSANLRDVNVNLQHLLLFHW 214
+ AN + +NLQH+ L+H+
Sbjct: 21 WKANFESIRINLQHMHLYHY 40
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 26.6 bits (56), Expect = 1.4
Identities = 13/62 (20%), Positives = 29/62 (46%)
Frame = +3
Query: 204 QKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQARQLRQDF 383
+KK + K+D + + + +L+K+ L I +D + Q +++ R+L +
Sbjct: 950 EKKLSSIKKDEQTISSKYKELEKDYLNIMADYQHSSQHLSNLEKAINEKNLNIRELNEKL 1009
Query: 384 KR 389
R
Sbjct: 1010 MR 1011
>SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 612
Score = 26.2 bits (55), Expect = 1.8
Identities = 14/59 (23%), Positives = 32/59 (54%)
Frame = +3
Query: 204 QKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQARQLRQD 380
Q +A + + D + ++L+ + ++E + +++Q + RAE E+ R+LR+D
Sbjct: 32 QYEAFKNERDHNLWEIERAELKIRVAQLERERAKLEQSLSFQQRRAEMLEKSLRELRKD 90
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 26.2 bits (55), Expect = 1.8
Identities = 10/48 (20%), Positives = 26/48 (54%)
Frame = +3
Query: 246 RLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQARQLRQDFKR 389
R L + N+L + + K + +V R + A ++ ++++++F+R
Sbjct: 99 RKELESAKNNLLNVYDSLKMQKASVSSMVNRKQRAAKEEQKIQEEFER 146
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 26.2 bits (55), Expect = 1.8
Identities = 14/60 (23%), Positives = 28/60 (46%)
Frame = +3
Query: 180 IATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQ 359
+A + L +K + +D+EG R + +L+ S+ ++ E ND+ E + Q
Sbjct: 68 VAFQKLLQEKTPLSSIQDLEGFREFMENLEHRYEMTVSEVRRLSHEVNDLQTDRENLKHQ 127
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 25.4 bits (53), Expect = 3.1
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 192 TELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVK 311
T+L + ++ DVE R L D Q K+ES+ VK
Sbjct: 450 TDLRTAEPSQYVNDVEVARRALRDAQAEQSKVESEYNSVK 489
>SPAPB8E5.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 103
Score = 25.4 bits (53), Expect = 3.1
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -3
Query: 344 FGAKYYIICFLFYLLCVTFYFKYIFL 267
F YI F + LC + FKYI L
Sbjct: 77 FSIYIYIYFFFYSFLCSPYLFKYISL 102
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 24.6 bits (51), Expect = 5.5
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = +3
Query: 207 KKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEAND 326
+K + ++D+E S L K + ++S+ + +K +ND
Sbjct: 883 EKISSLEKDLEAATKTASTLSKELKTVKSENDSLKSVSND 922
>SPAC17A2.11 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 217
Score = 24.2 bits (50), Expect = 7.2
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -2
Query: 285 F*VYFSANLRDVNVNLQHLLLFHWLFSAPVLFPWL 181
F +Y L ++ HL+ FH+LF + + FP L
Sbjct: 158 FLLYHQIILSHSLFHISHLISFHFLFFSFLSFPLL 192
>SPBP4H10.11c |||long-chain-fatty-acid-CoA ligase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 23.8 bits (49), Expect = 9.5
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 183 ATETELAQKKANETKEDVEGLRLRLSDLQKNILK 284
A TE K + E +G LRL D +KNI+K
Sbjct: 513 AAFTEDGWFKTGDVGEIAKGNTLRLIDRKKNIVK 546
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 23.8 bits (49), Expect = 9.5
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +3
Query: 195 ELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQARQLR 374
EL+ K +ED + +++D Q+ +L+ +KQ+ ND A+ E++A R
Sbjct: 106 ELSFVKEMFREEDSAVEQGQMNDKQQLLLESSEPTPTIKQQFNDRKKNAQIREREALAKR 165
Query: 375 Q 377
+
Sbjct: 166 E 166
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 23.8 bits (49), Expect = 9.5
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Frame = +3
Query: 129 KLRDIDA----LT*SIRDLIPIATETELAQKKANETKE-DVEGLRLRLSDLQKNILKIES 293
KL D D+ L+ +I L + E + A K+ + KE ++ RL+DL+ + ++ES
Sbjct: 1535 KLNDKDSIIRDLSENIEQLNNLLAEEKSAVKRLSTEKESEILQFNSRLADLEYHKSQVES 1594
Query: 294 DAEQVKQEANDVVLRAEGAEQQARQL 371
+ + K + + AE + L
Sbjct: 1595 ELGRSKLKLASTTEELQLAENERLSL 1620
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,154,553
Number of Sequences: 5004
Number of extensions: 16778
Number of successful extensions: 75
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 128029482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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