Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_A16
(391 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1287 + 25510813-25510862,25511326-25511504,25511715-255120... 37 0.007
03_03_0244 - 15772156-15773964,15774190-15774711 34 0.046
10_08_0558 + 18756797-18756887,18757189-18757262,18759881-187600... 29 0.99
11_06_0553 - 24920428-24921057,24921149-24921276,24921372-249214... 29 1.3
09_04_0393 + 17255315-17256019,17256107-17257909 29 1.3
02_03_0006 - 13868590-13869593,13869887-13870156,13870487-13871090 29 1.7
02_02_0157 - 7280335-7280541,7280656-7280762,7280918-7281097,728... 28 2.3
06_01_1196 + 10289708-10289823,10290828-10291541,10291614-102920... 27 4.0
02_01_0266 - 1758439-1758599,1758682-1758769,1759363-1759564,175... 27 4.0
10_01_0190 + 2107854-2108135,2108215-2109272,2110561-2110681 27 5.3
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 27 5.3
08_01_0735 - 6739502-6739908,6740016-6740510,6740848-6741280 27 7.0
06_02_0103 - 11829343-11829699,11831560-11831826,11832239-118325... 27 7.0
05_07_0116 - 27785083-27786123,27786201-27786278,27786364-277869... 27 7.0
04_03_0795 - 19704354-19704464,19705152-19705214,19705298-197053... 27 7.0
01_07_0047 + 40731508-40731714,40731834-40731893,40731992-407321... 27 7.0
01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 27 7.0
03_02_0628 + 9957385-9957888,9957985-9958111,9958541-9958608,995... 26 9.2
03_01_0192 - 1534013-1535147,1535249-1535370,1535497-1535556,153... 26 9.2
>07_03_1287 +
25510813-25510862,25511326-25511504,25511715-25512037,
25512160-25513950
Length = 780
Score = 36.7 bits (81), Expect = 0.007
Identities = 14/62 (22%), Positives = 37/62 (59%)
Frame = +3
Query: 204 QKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQARQLRQDF 383
+ + N TK+++E ++ + D Q+ ++++ ++ QEA D + A ++Q R+ R++
Sbjct: 510 EAELNRTKQEIEYVKSKEEDAQERMVELPRILQEAAQEAEDAKMVAFSVQEQVRKAREET 569
Query: 384 KR 389
++
Sbjct: 570 EK 571
Score = 32.3 bits (70), Expect = 0.14
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +3
Query: 189 ETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQ 356
E E A+ ++ ++E R + +L+ N+ K + + Q KQ++ +LRA+ EQ
Sbjct: 206 ELEAAEMVKSQVVNELEDTRRIIEELKHNLEKAQVEEVQAKQDSELALLRAQEIEQ 261
>03_03_0244 - 15772156-15773964,15774190-15774711
Length = 776
Score = 33.9 bits (74), Expect = 0.046
Identities = 12/59 (20%), Positives = 35/59 (59%)
Frame = +3
Query: 204 QKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQARQLRQD 380
+ + N TKE++E + ++ ++ ++ + ++ +Q QEA D + A+++ R+ +++
Sbjct: 499 EAELNRTKEEIEMVYIKEAETREKMAELPKMLQQAAQEAEDAKVAPHSAQEELRKAKEE 557
Score = 27.9 bits (59), Expect = 3.0
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +3
Query: 189 ETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQ 356
++E + + E++ R + +L+ + + E D +Q KQ++ LRA+ EQ
Sbjct: 196 DSEACEMAKLQVVEELGRTRRLVEELKHKLERAEIDVDQAKQDSELAQLRAQEMEQ 251
>10_08_0558 +
18756797-18756887,18757189-18757262,18759881-18760069,
18760190-18760309,18760457-18760521,18760684-18760828,
18761304-18763337,18763904-18764025,18764127-18764309,
18764635-18764690,18765086-18765141
Length = 1044
Score = 29.5 bits (63), Expect = 0.99
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +3
Query: 192 TELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQARQL 371
T Q K E ++E + DL+ + ++ D E +KQE +D+ R E Q QL
Sbjct: 531 TSELQNKIVELSNEIELYKKDREDLEMQMEQLALDYEILKQENHDISSRLE-QTQLREQL 589
Query: 372 RQDFK 386
R ++
Sbjct: 590 RMQYE 594
>11_06_0553 -
24920428-24921057,24921149-24921276,24921372-24921409,
24921522-24921734,24921906-24921998,24922089-24922276,
24922396-24922502,24922614-24922775,24922870-24922953,
24923060-24923168,24923340-24923468,24923504-24923556,
24923654-24923759,24924082-24924189
Length = 715
Score = 29.1 bits (62), Expect = 1.3
Identities = 17/56 (30%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +3
Query: 207 KKANETKEDVEGLRL-RLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQARQL 371
+ + E ED++ L+ R+++L K I DAEQ ++ N+ + RAE + ++ ++L
Sbjct: 499 ESSKELSEDIKKLKQKRIAELDKEIC----DAEQELKDLNEQIKRAETSLEERKKL 550
>09_04_0393 + 17255315-17256019,17256107-17257909
Length = 835
Score = 29.1 bits (62), Expect = 1.3
Identities = 12/59 (20%), Positives = 30/59 (50%)
Frame = +3
Query: 195 ELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQARQL 371
E+A ++ ED++ +++ L LQK + S + + +A ++ ++ E+ + L
Sbjct: 327 EVANERRATALEDLQSVKMELDQLQKEYTSLISQRDNTETKARKAIVASQEIEKVVQDL 385
>02_03_0006 - 13868590-13869593,13869887-13870156,13870487-13871090
Length = 625
Score = 28.7 bits (61), Expect = 1.7
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -2
Query: 168 HG*ITLMRQCHVALEWHFLQRLEQLEHRPVHLILYLPFLMLNLHLVPHSCS 16
HG ITL +LE +E+ +H P + L+LP L LH + HS S
Sbjct: 282 HGAITLRDDSDTSLE------VERSDHAPELVPLFLPPLQEPLHSISHSSS 326
>02_02_0157 -
7280335-7280541,7280656-7280762,7280918-7281097,
7281182-7281277,7281378-7281459,7281553-7283037,
7283376-7283450,7283521-7283598,7283708-7283791,
7283885-7283965,7284073-7284291,7284398-7284648,
7284748-7284796
Length = 997
Score = 28.3 bits (60), Expect = 2.3
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Frame = +3
Query: 123 ILKLRD--IDALT*SIRDLIPIATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESD 296
I+K +D +D L ++I + E + + E KED+ L L +++ + +
Sbjct: 368 IIKEKDDALDRLVKEKEEMIRLLKEKDDVVRLMKE-KEDL--LNLEKGEVEGTTKMTDDN 424
Query: 297 AEQVKQEANDVVLR-AEGAEQQARQLRQ 377
+++ +E NDVVLR E E+ R L++
Sbjct: 425 KDRLIKEKNDVVLRLTEEKEEMVRLLKE 452
>06_01_1196 +
10289708-10289823,10290828-10291541,10291614-10292058,
10292329-10293642
Length = 862
Score = 27.5 bits (58), Expect = 4.0
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 174 IPIATETELAQKKANETKEDVEGLRLRLSDLQKNILK 284
+ I+ EL +KAN+T ED+E + ++SD+ I+K
Sbjct: 310 LEISYAKELLLRKANKTTEDIESDK-KMSDIITKIVK 345
>02_01_0266 -
1758439-1758599,1758682-1758769,1759363-1759564,
1759664-1759800,1760169-1760268,1760350-1760522,
1760797-1760941,1761018-1761139,1761225-1761470,
1761962-1762182,1762278-1762338,1762409-1762487,
1762572-1762651,1763221-1763292,1763382-1763449,
1763550-1763588,1763828-1763903,1763992-1764006
Length = 694
Score = 27.5 bits (58), Expect = 4.0
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +3
Query: 189 ETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQA 362
E + + K N+TK EG+ + ++ K + +IE D +K D +L + A+ +A
Sbjct: 269 EIKYSTKGINDTKAQKEGVEKKRTEALKVVAQIELDLRDIK----DRILNEKRAKDEA 322
>10_01_0190 + 2107854-2108135,2108215-2109272,2110561-2110681
Length = 486
Score = 27.1 bits (57), Expect = 5.3
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -2
Query: 114 LQRLEQLEHRPVHLILYLPFLMLNLHLVPH 25
L R E++ HRP LY+ M H+ H
Sbjct: 122 LARCERMSHRPYDAYLYIDNFMFGRHVEKH 151
>03_01_0423 +
3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 27.1 bits (57), Expect = 5.3
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 201 AQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQ 314
+Q++ + DVE +LSDL+ N LK+ ++ +K+
Sbjct: 812 SQEEVKQMARDVEHSNKKLSDLENNNLKLHDLSQGLKK 849
>08_01_0735 - 6739502-6739908,6740016-6740510,6740848-6741280
Length = 444
Score = 26.6 bits (56), Expect = 7.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 276 YFSANLRDVNVNLQHLLLFHWLFSAPVLFPW 184
Y + + D NV++ L L +APV FPW
Sbjct: 329 YLNKEILDHNVDISLSTLIERLKNAPVEFPW 359
>06_02_0103 -
11829343-11829699,11831560-11831826,11832239-11832559,
11833783-11833844,11835413-11835446,11835539-11835619
Length = 373
Score = 26.6 bits (56), Expect = 7.0
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 261 DLQKNILKIESDAEQVKQEANDVVLRAEGAEQQARQLRQDFKR 389
DL+K+ + + EQ++ + +V A+ ARQ R+DF R
Sbjct: 170 DLKKSRIPMHDSDEQLRSSRHQIV-----ADSYARQFRKDFMR 207
>05_07_0116 -
27785083-27786123,27786201-27786278,27786364-27786976,
27787128-27787213,27787316-27787438,27787600-27787734,
27787930-27788019,27788796-27788981,27789560-27789661,
27789787-27789900,27790010-27790153,27790260-27790325,
27790895-27791056,27791668-27791916
Length = 1062
Score = 26.6 bits (56), Expect = 7.0
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +3
Query: 189 ETELAQ--KKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQA 362
E E+A+ K N+T+ L RL + + ESD+ +K+E + + E +A
Sbjct: 691 EEEIARLNTKINQTEIHATNLISRLEATEAKLKNHESDSLALKEEIRSLTVSLESFRTEA 750
Query: 363 RQLRQDFK 386
+ ++ K
Sbjct: 751 QSREKEVK 758
>04_03_0795 -
19704354-19704464,19705152-19705214,19705298-19705378,
19705468-19705623,19705711-19705785,19706477-19706587,
19707206-19707304,19707453-19707546,19707779-19707838,
19709262-19709334,19711448-19711490,19711533-19711606,
19711985-19712075,19712170-19712214,19712533-19712589,
19713440-19713544,19713817-19713932,19714625-19714634,
19714810-19714920,19715502-19715594,19715664-19715690,
19715736-19715798,19716326-19716451,19716812-19716949,
19717164-19717832,19717949-19718123,19718269-19718450
Length = 1015
Score = 26.6 bits (56), Expect = 7.0
Identities = 8/28 (28%), Positives = 18/28 (64%)
Frame = -2
Query: 159 ITLMRQCHVALEWHFLQRLEQLEHRPVH 76
++++R+C+ L W L R+ + E + +H
Sbjct: 370 LSIIRECNCTLRWLLLHRMLEFEVKELH 397
>01_07_0047 +
40731508-40731714,40731834-40731893,40731992-40732159,
40732198-40732203,40732898-40732961,40733395-40733690,
40733799-40733903,40734030-40734066,40734309-40734403,
40735226-40735282,40735361-40735438,40735527-40735586
Length = 410
Score = 26.6 bits (56), Expect = 7.0
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +3
Query: 192 TELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAE 344
TE+ ++ E + VE ++ +SDL+ ES A + + +R E
Sbjct: 106 TEILHRRGMELEAQVEAMKATISDLEAEAKFFESTAAEASAVEGLIEIREE 156
>01_01_0568 -
4207812-4209587,4210056-4210291,4210647-4210793,
4211857-4212145
Length = 815
Score = 26.6 bits (56), Expect = 7.0
Identities = 18/89 (20%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = +3
Query: 129 KLRDIDALT*SIRD-LIPIATETELAQKKANETKEDVEGLRLRLSDLQKNIL----KIES 293
KL ++++++ ++ D L+ + Q++ T ++ + +L+K +L K+ES
Sbjct: 559 KLGEVESVSKALSDELVSVKEMVHKGQEELEATSNELASIVEARDNLKKELLDVFKKLES 618
Query: 294 DAEQVKQEANDVVLRAEGAEQQARQLRQD 380
++++ E V E +QL+ D
Sbjct: 619 TSQELVDERKTVTTLNRELEALVKQLQMD 647
>03_02_0628 +
9957385-9957888,9957985-9958111,9958541-9958608,
9958695-9958772,9958885-9958949,9959130-9959196,
9959344-9959526,9959690-9959746,9959857-9959952,
9960061-9960219
Length = 467
Score = 26.2 bits (55), Expect = 9.2
Identities = 19/82 (23%), Positives = 37/82 (45%)
Frame = +3
Query: 144 DALT*SIRDLIPIATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEAN 323
DALT S E E K + K+D E ++ + + ++K+ + E +K++ +
Sbjct: 365 DALTKSNEVFETYKKEMEKMVKLIKDLKKDNEFMKSKCENSDVALVKLIEERELMKKQVD 424
Query: 324 DVVLRAEGAEQQARQLRQDFKR 389
+ E E R L+ + K+
Sbjct: 425 KFKNQKEKLESLCRSLQAERKQ 446
>03_01_0192 -
1534013-1535147,1535249-1535370,1535497-1535556,
1535666-1535764,1535839-1535889,1535974-1536175,
1536709-1536911,1537264-1537350,1537435-1537589,
1537640-1537723,1538121-1538325,1538497-1538724
Length = 876
Score = 26.2 bits (55), Expect = 9.2
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +3
Query: 201 AQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQE 317
++KKA E + ++ +L ++ QK K+E D +VK+E
Sbjct: 415 SEKKARELEAQLQDEQLVSANNQKKSDKLEMDLRKVKKE 453
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,548,934
Number of Sequences: 37544
Number of extensions: 103325
Number of successful extensions: 413
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 413
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 660830060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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