Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_A16
         (391 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    36   4e-04
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    30   0.026
DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.        27   0.24 
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    23   3.0  
AY330176-1|AAQ16282.1|  179|Anopheles gambiae odorant-binding pr...    23   3.0  
AJ618926-1|CAF02005.1|  315|Anopheles gambiae odorant-binding pr...    23   3.0  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   3.9  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 36.3 bits (80), Expect = 4e-04
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
 Frame = +3

Query: 198 LAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLR-AEGAEQQARQLR 374
           LAQ    +TKE++E L  ++  LQK I++      Q   +  D+  + A+G   + R+L+
Sbjct: 731 LAQTSFQQTKEEIEELNKKIETLQKTIVEARETQTQCSAKVKDLQAKIADGKGHRERELK 790

Query: 375 ---QDFKR 389
              +D KR
Sbjct: 791 SAEEDLKR 798



 Score = 26.6 bits (56), Expect = 0.32
 Identities = 14/58 (24%), Positives = 31/58 (53%)
 Frame = +3

Query: 204 QKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQARQLRQ 377
           +++    +ED++  + +  + +KN  K E D E +K E  ++      A++QA +L +
Sbjct: 786 ERELKSAEEDLKRSKKKSEESRKNWKKHEQDFETLKLEIEELQKGIVTAKEQAVKLEE 843


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 30.3 bits (65), Expect = 0.026
 Identities = 17/70 (24%), Positives = 33/70 (47%)
 Frame = +3

Query: 180 IATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQ 359
           IA + EL +KK  E  E  E LR+++ +  KN  +++   +  +   ND+  +     Q 
Sbjct: 424 IAKQGEL-EKKIQEHTESFEQLRVQIDEHNKNFYELKKKKDHYQSLRNDIWKKETAVTQT 482

Query: 360 ARQLRQDFKR 389
               +++  R
Sbjct: 483 LSGYKEELAR 492


>DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.
          Length = 447

 Score = 27.1 bits (57), Expect = 0.24
 Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 5/29 (17%)
 Frame = -2

Query: 78 HLILYLPFLMLNLHLVPH-----SCSPGD 7
          HL    P L+L L +VPH      CSPGD
Sbjct: 6  HLGTVAPLLLLTLLIVPHHGTNGQCSPGD 34


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 8   SPGLQEWGTRCKFNIRNGK*SIKCT 82
           SP LQEW   C+   ++ K  + C+
Sbjct: 624 SPELQEWRIACQSADKSHKEQVNCS 648


>AY330176-1|AAQ16282.1|  179|Anopheles gambiae odorant-binding
          protein AgamOBP49 protein.
          Length = 179

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 69 LYLPFLMLNLHLVPHS 22
          L+  FL+L LHL+P S
Sbjct: 8  LFRSFLLLTLHLLPQS 23


>AJ618926-1|CAF02005.1|  315|Anopheles gambiae odorant-binding
          protein OBPjj6b protein.
          Length = 315

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 69 LYLPFLMLNLHLVPHS 22
          L+  FL+L LHL+P S
Sbjct: 8  LFRSFLLLTLHLLPQS 23


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
 Frame = +3

Query: 129 KLRDIDALT*SIR-----DLIPIATETELAQKKANETKEDVEGLRLRLSDLQKNI 278
           K R++D L  ++R     D   IA +    QK+A + K  ++ L    S  QKN+
Sbjct: 708 KQRNLDELFNAVRLARPEDASEIALDGGQQQKRATKKKTTIKQLFSAASKFQKNL 762


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 297,434
Number of Sequences: 2352
Number of extensions: 4206
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30356973
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)