Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_A16
(391 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 35 0.018
U29380-18|ABB88224.1| 733|Caenorhabditis elegans Zygote defecti... 34 0.041
U29380-17|AAA68733.3| 736|Caenorhabditis elegans Zygote defecti... 34 0.041
U29380-16|AAS60254.1| 761|Caenorhabditis elegans Zygote defecti... 34 0.041
U29380-15|AAS60253.1| 777|Caenorhabditis elegans Zygote defecti... 34 0.041
AY487140-1|AAR32790.1| 733|Caenorhabditis elegans centrosome at... 34 0.041
AL021492-4|CAA16384.1| 492|Caenorhabditis elegans Hypothetical ... 33 0.054
U41278-4|AAK31513.3| 928|Caenorhabditis elegans Hypothetical pr... 31 0.38
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 30 0.50
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 30 0.50
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 30 0.50
U13876-1|AAM48538.1| 353|Caenorhabditis elegans Hypothetical pr... 30 0.50
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 30 0.67
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 30 0.67
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 30 0.67
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 29 1.2
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 29 1.2
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 29 1.5
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 29 1.5
U97008-8|AAB52306.2| 307|Caenorhabditis elegans Hypothetical pr... 28 2.0
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 28 2.7
AF078784-1|AAK18967.1| 458|Caenorhabditis elegans Hypothetical ... 28 2.7
Z92780-1|CAB07174.1| 1186|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z73423-7|CAL36497.1| 567|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z73423-6|CAD44093.1| 575|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z73423-5|CAA97777.3| 575|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z50045-6|CAL36494.1| 567|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z50045-5|CAD44129.1| 575|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z50045-4|CAA90365.3| 575|Caenorhabditis elegans Hypothetical pr... 27 3.6
X70834-1|CAA50182.1| 592|Caenorhabditis elegans Cytoplasmic int... 27 3.6
AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical ... 27 3.6
AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical ... 27 3.6
Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z75527-4|CAA99779.2| 316|Caenorhabditis elegans Hypothetical pr... 27 4.7
U40424-5|AAA81461.2| 638|Caenorhabditis elegans Hypothetical pr... 27 4.7
DQ178236-1|ABA18178.1| 316|Caenorhabditis elegans putative low ... 27 4.7
U49947-3|AAK68211.1| 114|Caenorhabditis elegans Hypothetical pr... 27 6.2
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 27 6.2
U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical p... 27 6.2
L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans chrom... 27 6.2
AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans hom... 27 6.2
AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans hom... 27 6.2
AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans hom... 27 6.2
AC006736-2|AAF60493.1| 529|Caenorhabditis elegans Abnormal cell... 27 6.2
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 26 8.2
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 26 8.2
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 26 8.2
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 26 8.2
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 26 8.2
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 26 8.2
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily
assigned gene nameprotein 278 protein.
Length = 1130
Score = 35.1 bits (77), Expect = 0.018
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = +3
Query: 189 ETELAQKKANET----KEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQ 356
E +L K++ E K DV L +L + +K + + + +QVK E ND + R
Sbjct: 318 ELQLQSKRSREDLVSCKNDVTALEKKLHNKEKEVQTLTKELDQVKTETNDKIRRLTEVTS 377
Query: 357 QARQLRQDFKR 389
+ + R+ F++
Sbjct: 378 EFAEYRKKFQQ 388
>U29380-18|ABB88224.1| 733|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform d protein.
Length = 733
Score = 33.9 bits (74), Expect = 0.041
Identities = 18/83 (21%), Positives = 49/83 (59%)
Frame = +3
Query: 129 KLRDIDALT*SIRDLIPIATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQV 308
+++++++L +LI + ++ + +++ + +E L+ ++ DLQ+N+LK + E
Sbjct: 515 RIQELESLEPLKGELITLKSKNGVLEEEKLFATKQIEELQQQIEDLQENLLK---NQEHA 571
Query: 309 KQEANDVVLRAEGAEQQARQLRQ 377
+ + ++ E AE +A+Q+R+
Sbjct: 572 SGDVVGLKIQLEKAEVEAQQMRE 594
>U29380-17|AAA68733.3| 736|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform a protein.
Length = 736
Score = 33.9 bits (74), Expect = 0.041
Identities = 18/83 (21%), Positives = 49/83 (59%)
Frame = +3
Query: 129 KLRDIDALT*SIRDLIPIATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQV 308
+++++++L +LI + ++ + +++ + +E L+ ++ DLQ+N+LK + E
Sbjct: 518 RIQELESLEPLKGELITLKSKNGVLEEEKLFATKQIEELQQQIEDLQENLLK---NQEHA 574
Query: 309 KQEANDVVLRAEGAEQQARQLRQ 377
+ + ++ E AE +A+Q+R+
Sbjct: 575 SGDVVGLKIQLEKAEVEAQQMRE 597
>U29380-16|AAS60254.1| 761|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform c protein.
Length = 761
Score = 33.9 bits (74), Expect = 0.041
Identities = 18/83 (21%), Positives = 49/83 (59%)
Frame = +3
Query: 129 KLRDIDALT*SIRDLIPIATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQV 308
+++++++L +LI + ++ + +++ + +E L+ ++ DLQ+N+LK + E
Sbjct: 518 RIQELESLEPLKGELITLKSKNGVLEEEKLFATKQIEELQQQIEDLQENLLK---NQEHA 574
Query: 309 KQEANDVVLRAEGAEQQARQLRQ 377
+ + ++ E AE +A+Q+R+
Sbjct: 575 SGDVVGLKIQLEKAEVEAQQMRE 597
>U29380-15|AAS60253.1| 777|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform b protein.
Length = 777
Score = 33.9 bits (74), Expect = 0.041
Identities = 18/83 (21%), Positives = 49/83 (59%)
Frame = +3
Query: 129 KLRDIDALT*SIRDLIPIATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQV 308
+++++++L +LI + ++ + +++ + +E L+ ++ DLQ+N+LK + E
Sbjct: 518 RIQELESLEPLKGELITLKSKNGVLEEEKLFATKQIEELQQQIEDLQENLLK---NQEHA 574
Query: 309 KQEANDVVLRAEGAEQQARQLRQ 377
+ + ++ E AE +A+Q+R+
Sbjct: 575 SGDVVGLKIQLEKAEVEAQQMRE 597
>AY487140-1|AAR32790.1| 733|Caenorhabditis elegans centrosome
attachment protein A protein.
Length = 733
Score = 33.9 bits (74), Expect = 0.041
Identities = 18/83 (21%), Positives = 49/83 (59%)
Frame = +3
Query: 129 KLRDIDALT*SIRDLIPIATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQV 308
+++++++L +LI + ++ + +++ + +E L+ ++ DLQ+N+LK + E
Sbjct: 515 RIQELESLEPLKGELITLKSKNGVLEEEKLFATKQIEELQQQIEDLQENLLK---NQEHA 571
Query: 309 KQEANDVVLRAEGAEQQARQLRQ 377
+ + ++ E AE +A+Q+R+
Sbjct: 572 SGDVVGLKIQLEKAEVEAQQMRE 594
>AL021492-4|CAA16384.1| 492|Caenorhabditis elegans Hypothetical
protein Y45F10D.9 protein.
Length = 492
Score = 33.5 bits (73), Expect = 0.054
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +3
Query: 183 ATETELAQKKANETKEDVE---GLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAE 353
A E ++K + ++ VE G++ ++ + ++E + E VK+E ++ L E E
Sbjct: 194 ADELASLRQKCGDLEKQVEKLSGVKEEFEEMSEKFKELEDEVELVKEERENIRLLVEDKE 253
Query: 354 QQARQLRQD 380
+ L+QD
Sbjct: 254 DEVADLKQD 262
>U41278-4|AAK31513.3| 928|Caenorhabditis elegans Hypothetical
protein F33G12.5 protein.
Length = 928
Score = 30.7 bits (66), Expect = 0.38
Identities = 14/65 (21%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +3
Query: 198 LAQKKANETK--EDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQARQL 371
+AQK + T +++EG R ++ +Q N+L ++ + + + ++ E + QL
Sbjct: 200 IAQKDSLLTARHQELEGARREVASMQANLLNVQHERSEAQARVKSMIKETAAQENRISQL 259
Query: 372 RQDFK 386
+D +
Sbjct: 260 MKDIQ 264
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 30.3 bits (65), Expect = 0.50
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +3
Query: 195 ELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQARQLR 374
E Q+K++E + ++ L + + L + E K E ND+ R + EQ+ L+
Sbjct: 1454 EQIQRKSDEYQTTIDDLAHSHRVSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQ 1513
Query: 375 QDF 383
QD+
Sbjct: 1514 QDY 1516
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 30.3 bits (65), Expect = 0.50
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +3
Query: 195 ELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQARQLR 374
E Q+K++E + ++ L + + L + E K E ND+ R + EQ+ L+
Sbjct: 1527 EQIQRKSDEYQTTIDDLAHSHRVSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQ 1586
Query: 375 QDF 383
QD+
Sbjct: 1587 QDY 1589
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 30.3 bits (65), Expect = 0.50
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +3
Query: 195 ELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQARQLR 374
E Q+K++E + ++ L + + L + E K E ND+ R + EQ+ L+
Sbjct: 1527 EQIQRKSDEYQTTIDDLAHSHRVSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQ 1586
Query: 375 QDF 383
QD+
Sbjct: 1587 QDY 1589
>U13876-1|AAM48538.1| 353|Caenorhabditis elegans Hypothetical
protein F57B9.7a protein.
Length = 353
Score = 30.3 bits (65), Expect = 0.50
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = +3
Query: 165 RDLIPIATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAE 344
R L I+ E E K ET+E R +L L+K K+E DAE + + D V+ +
Sbjct: 21 RALDKISREAEARMKLKRETREQARQGRYQL--LEK---KVEEDAEAYRHDTADKVIELQ 75
Query: 345 GAEQQ 359
QQ
Sbjct: 76 DRVQQ 80
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 29.9 bits (64), Expect = 0.67
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = +3
Query: 171 LIPIATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGA 350
L + + + A K+ +E + + R +D+Q+ KIE++ E +K++ D+ + A
Sbjct: 914 LAKLEAQQKDASKQLSELNDQLADNEDRTADVQRAKKKIEAEVEALKKQIQDLEMSLRKA 973
Query: 351 EQQ 359
E +
Sbjct: 974 ESE 976
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 29.9 bits (64), Expect = 0.67
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = +3
Query: 171 LIPIATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGA 350
L + + + A K+ +E + + R +D+Q+ KIE++ E +K++ D+ + A
Sbjct: 914 LAKLEAQQKDASKQLSELNDQLADNEDRTADVQRAKKKIEAEVEALKKQIQDLEMSLRKA 973
Query: 351 EQQ 359
E +
Sbjct: 974 ESE 976
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 29.9 bits (64), Expect = 0.67
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = +3
Query: 171 LIPIATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGA 350
L + + + A K+ +E + + R +D+Q+ KIE++ E +K++ D+ + A
Sbjct: 917 LAKLEAQQKDASKQLSELNDQLADNEDRTADVQRAKKKIEAEVEALKKQIQDLEMSLRKA 976
Query: 351 EQQ 359
E +
Sbjct: 977 ESE 979
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 29.1 bits (62), Expect = 1.2
Identities = 17/76 (22%), Positives = 36/76 (47%)
Frame = +3
Query: 144 DALT*SIRDLIPIATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEAN 323
DAL ++ + +A+ + + E +S L+K + ++ K++ +
Sbjct: 1418 DALDACNAKIVALENARSRLTAEADANRLEAEHHAQAVSSLEKKQKAFDKVIDEWKKKVD 1477
Query: 324 DVVLRAEGAEQQARQL 371
D+ L +GA++ ARQL
Sbjct: 1478 DLYLELDGAQRDARQL 1493
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 29.1 bits (62), Expect = 1.2
Identities = 17/76 (22%), Positives = 36/76 (47%)
Frame = +3
Query: 144 DALT*SIRDLIPIATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEAN 323
DAL ++ + +A+ + + E +S L+K + ++ K++ +
Sbjct: 1418 DALDACNAKIVALENARSRLTAEADANRLEAEHHAQAVSSLEKKQKAFDKVIDEWKKKVD 1477
Query: 324 DVVLRAEGAEQQARQL 371
D+ L +GA++ ARQL
Sbjct: 1478 DLYLELDGAQRDARQL 1493
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 29.1 bits (62), Expect = 1.2
Identities = 17/76 (22%), Positives = 36/76 (47%)
Frame = +3
Query: 144 DALT*SIRDLIPIATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEAN 323
DAL ++ + +A+ + + E +S L+K + ++ K++ +
Sbjct: 1418 DALDACNAKIVALENARSRLTAEADANRLEAEHHAQAVSSLEKKQKAFDKVIDEWKKKVD 1477
Query: 324 DVVLRAEGAEQQARQL 371
D+ L +GA++ ARQL
Sbjct: 1478 DLYLELDGAQRDARQL 1493
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical protein
C34E11.3 protein.
Length = 1577
Score = 28.7 bits (61), Expect = 1.5
Identities = 15/57 (26%), Positives = 31/57 (54%)
Frame = +3
Query: 144 DALT*SIRDLIPIATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQ 314
DALT + + ++ +K ANE+ E V+ L+ RL+ ++ + ++ +D K+
Sbjct: 1021 DALTNFEKQVTDERNNLKVKEKSANESTEKVKELQNRLTAKEEELERLNTDLRLTKE 1077
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 28.7 bits (61), Expect = 1.5
Identities = 15/57 (26%), Positives = 31/57 (54%)
Frame = +3
Query: 144 DALT*SIRDLIPIATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQ 314
DALT + + ++ +K ANE+ E V+ L+ RL+ ++ + ++ +D K+
Sbjct: 1021 DALTNFEKQVTDERNNLKVKEKSANESTEKVKELQNRLTAKEEELERLNTDLRLTKE 1077
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical protein
C34E11.3 protein.
Length = 1577
Score = 28.7 bits (61), Expect = 1.5
Identities = 15/57 (26%), Positives = 31/57 (54%)
Frame = +3
Query: 144 DALT*SIRDLIPIATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQ 314
DALT + + ++ +K ANE+ E V+ L+ RL+ ++ + ++ +D K+
Sbjct: 1021 DALTNFEKQVTDERNNLKVKEKSANESTEKVKELQNRLTAKEEELERLNTDLRLTKE 1077
>U97008-8|AAB52306.2| 307|Caenorhabditis elegans Hypothetical
protein C03G6.6 protein.
Length = 307
Score = 28.3 bits (60), Expect = 2.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 320 CFLFYLLCVTFYFKYIFL 267
C +F+LL +TFY YI L
Sbjct: 4 CTIFFLLALTFYISYIIL 21
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 27.9 bits (59), Expect = 2.7
Identities = 14/60 (23%), Positives = 31/60 (51%)
Frame = +3
Query: 207 KKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQARQLRQDFK 386
K+ + ++D EGL+ +SDL+ I K ES+ + + + + ++ +L ++ K
Sbjct: 948 KQKKKIEQDNEGLKKTVSDLETTIKKQESEKQAKDHQIRSLQDEIQSQDEVISKLNKEKK 1007
>AF078784-1|AAK18967.1| 458|Caenorhabditis elegans Hypothetical
protein H34I24.2 protein.
Length = 458
Score = 27.9 bits (59), Expect = 2.7
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +3
Query: 183 ATETELAQKKAN-ETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEAND 326
A++ + A K+AN E + ++ L+ L +QKN+ I+++ + + ND
Sbjct: 170 ASDKDKAVKEANDEAVQKIKDLQALLDSIQKNLNAIQNNIIVITNQQND 218
>Z92780-1|CAB07174.1| 1186|Caenorhabditis elegans Hypothetical protein
C45G3.1 protein.
Length = 1186
Score = 27.5 bits (58), Expect = 3.6
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +3
Query: 198 LAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQARQLRQ 377
L + + E +E +E L LS+ QKN +K + + ++ +AN LR +Q R+L++
Sbjct: 831 LVEFRMTEEQERLEMLFQSLSEDQKNFVKTNNLSVSIEDDANTPELRR--ILRQTRELKR 888
>Z73423-7|CAL36497.1| 567|Caenorhabditis elegans Hypothetical
protein F38B2.1c protein.
Length = 567
Score = 27.5 bits (58), Expect = 3.6
Identities = 14/55 (25%), Positives = 30/55 (54%)
Frame = +3
Query: 180 IATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAE 344
I T++ + KE+V+ LR +LSDL+ + +ES ++++ ++ + E
Sbjct: 301 IQTQSARQNMEQGYAKEEVKRLRTQLSDLRGKLADLESRNSLLEKQIQELNYQLE 355
>Z73423-6|CAD44093.1| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1b protein.
Length = 575
Score = 27.5 bits (58), Expect = 3.6
Identities = 14/55 (25%), Positives = 30/55 (54%)
Frame = +3
Query: 180 IATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAE 344
I T++ + KE+V+ LR +LSDL+ + +ES ++++ ++ + E
Sbjct: 309 IQTQSARQNMEQGYAKEEVKRLRTQLSDLRGKLADLESRNSLLEKQIQELNYQLE 363
>Z73423-5|CAA97777.3| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1a protein.
Length = 575
Score = 27.5 bits (58), Expect = 3.6
Identities = 14/55 (25%), Positives = 30/55 (54%)
Frame = +3
Query: 180 IATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAE 344
I T++ + KE+V+ LR +LSDL+ + +ES ++++ ++ + E
Sbjct: 309 IQTQSARQNMEQGYAKEEVKRLRTQLSDLRGKLADLESRNSLLEKQIQELNYQLE 363
>Z50045-6|CAL36494.1| 567|Caenorhabditis elegans Hypothetical
protein F38B2.1c protein.
Length = 567
Score = 27.5 bits (58), Expect = 3.6
Identities = 14/55 (25%), Positives = 30/55 (54%)
Frame = +3
Query: 180 IATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAE 344
I T++ + KE+V+ LR +LSDL+ + +ES ++++ ++ + E
Sbjct: 301 IQTQSARQNMEQGYAKEEVKRLRTQLSDLRGKLADLESRNSLLEKQIQELNYQLE 355
>Z50045-5|CAD44129.1| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1b protein.
Length = 575
Score = 27.5 bits (58), Expect = 3.6
Identities = 14/55 (25%), Positives = 30/55 (54%)
Frame = +3
Query: 180 IATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAE 344
I T++ + KE+V+ LR +LSDL+ + +ES ++++ ++ + E
Sbjct: 309 IQTQSARQNMEQGYAKEEVKRLRTQLSDLRGKLADLESRNSLLEKQIQELNYQLE 363
>Z50045-4|CAA90365.3| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1a protein.
Length = 575
Score = 27.5 bits (58), Expect = 3.6
Identities = 14/55 (25%), Positives = 30/55 (54%)
Frame = +3
Query: 180 IATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAE 344
I T++ + KE+V+ LR +LSDL+ + +ES ++++ ++ + E
Sbjct: 309 IQTQSARQNMEQGYAKEEVKRLRTQLSDLRGKLADLESRNSLLEKQIQELNYQLE 363
>X70834-1|CAA50182.1| 592|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 592
Score = 27.5 bits (58), Expect = 3.6
Identities = 14/55 (25%), Positives = 30/55 (54%)
Frame = +3
Query: 180 IATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAE 344
I T++ + KE+V+ LR +LSDL+ + +ES ++++ ++ + E
Sbjct: 328 IQTQSARQNMEQGYAKEEVKRLRTQLSDLRGKLADLESRNSLLEKQIQELNYQLE 382
>AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.9 protein.
Length = 244
Score = 27.5 bits (58), Expect = 3.6
Identities = 14/60 (23%), Positives = 30/60 (50%)
Frame = +3
Query: 207 KKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQARQLRQDFK 386
KK NE +D+E R+ L + + K+E+ + ++ V ++Q + +R++ K
Sbjct: 83 KKRNEYLDDLEEANERIKILDEELDKLEAKISKTEESLVQSVSMLLEKDEQLKTIRKEMK 142
>AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.8 protein.
Length = 244
Score = 27.5 bits (58), Expect = 3.6
Identities = 14/60 (23%), Positives = 30/60 (50%)
Frame = +3
Query: 207 KKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQARQLRQDFK 386
KK NE +D+E R+ L + + K+E+ + ++ V ++Q + +R++ K
Sbjct: 83 KKRNEYLDDLEEANERIKILDEKLDKLEAKISKTEESLVQSVSMLLEKDEQLKTIRKEMK 142
>Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical
protein B0365.7 protein.
Length = 2769
Score = 27.1 bits (57), Expect = 4.7
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +3
Query: 243 LRLRLSDLQKNILKIESDAEQVKQEANDVVLRA 341
LR+R+SD+ N L IE+ E+++ E ND+ +A
Sbjct: 634 LRMRISDVDHNSLVIET--ERLQSEKNDLKEKA 664
>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical
protein B0365.7 protein.
Length = 2769
Score = 27.1 bits (57), Expect = 4.7
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +3
Query: 243 LRLRLSDLQKNILKIESDAEQVKQEANDVVLRA 341
LR+R+SD+ N L IE+ E+++ E ND+ +A
Sbjct: 634 LRMRISDVDHNSLVIET--ERLQSEKNDLKEKA 664
>Z75527-4|CAA99779.2| 316|Caenorhabditis elegans Hypothetical
protein C15C8.4 protein.
Length = 316
Score = 27.1 bits (57), Expect = 4.7
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = +3
Query: 195 ELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQARQLR 374
+LAQ+ T ++ L+ LS + + KIE E+V + D R + Q L
Sbjct: 228 KLAQENEKLTPHELSVLKDELSHFESQLKKIEFHKEEVSRLQEDAEERGKDKSQVYENLE 287
Query: 375 QDFK 386
K
Sbjct: 288 LSIK 291
>U40424-5|AAA81461.2| 638|Caenorhabditis elegans Hypothetical
protein C24A3.1 protein.
Length = 638
Score = 27.1 bits (57), Expect = 4.7
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 252 RLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQARQLRQD 380
++ DL KN+ K + D E+ + A D + R + +Q RQD
Sbjct: 214 QVMDLTKNLSKEQRDREKDSKTAGDGIQRLQDMIRQQDLARQD 256
>DQ178236-1|ABA18178.1| 316|Caenorhabditis elegans putative low
density lipoproteinreceptor associated protein (37.4 kD)
protein.
Length = 316
Score = 27.1 bits (57), Expect = 4.7
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = +3
Query: 195 ELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQARQLR 374
+LAQ+ T ++ L+ LS + + KIE E+V + D R + Q L
Sbjct: 228 KLAQENEKLTPHELSVLKDELSHFESQLKKIEFHKEEVSRLQEDAEERGKDKSQVYENLE 287
Query: 375 QDFK 386
K
Sbjct: 288 LSIK 291
>U49947-3|AAK68211.1| 114|Caenorhabditis elegans Hypothetical
protein C30G4.7 protein.
Length = 114
Score = 26.6 bits (56), Expect = 6.2
Identities = 9/30 (30%), Positives = 23/30 (76%)
Frame = +3
Query: 225 KEDVEGLRLRLSDLQKNILKIESDAEQVKQ 314
+E+V+GLR ++ DL+ ++ ++E++ +K+
Sbjct: 71 REEVDGLRGKIFDLENHVRRLEAENSILKR 100
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 26.6 bits (56), Expect = 6.2
Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Frame = +3
Query: 207 KKANETKEDVEGLRLRLSDLQKNILKIESDAEQVK--QEAND 326
KK KE+V+G+ L++S+ + +I + E++K Q+++D
Sbjct: 550 KKIKACKEEVDGILLKISEKSMVVDEIAAQIEELKNPQKSDD 591
>U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical
protein C32D5.10 protein.
Length = 610
Score = 26.6 bits (56), Expect = 6.2
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -1
Query: 265 KSERRKRKPSTSSFVSLAFFCASSVSVAIGIRSRIDH 155
+S+ +KRKP S+ C S ++ +R IDH
Sbjct: 147 RSDSQKRKPRLEELNSMKQLCVSQLNSLQMLRDDIDH 183
>L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans
chromodomain proteinprotein 1 protein.
Length = 304
Score = 26.6 bits (56), Expect = 6.2
Identities = 18/71 (25%), Positives = 36/71 (50%)
Frame = +3
Query: 177 PIATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQ 356
P+ + + Q++ E +E VEG S +++ + E E K+E DV L +E E+
Sbjct: 153 PVPKKKKEVQEEPEE-EESVEGEDEEESQEVEDLKEDEKMEEDEKEEEEDVQLESEKNEK 211
Query: 357 QARQLRQDFKR 389
+ + + + K+
Sbjct: 212 EEEEEKVEEKK 222
>AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform a protein.
Length = 1273
Score = 26.6 bits (56), Expect = 6.2
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 210 KANETKEDVEGLRLRLSDLQKNILKIESDAE-QVKQEANDVVLRAE 344
K N ED+ G +++ L+ + K+ES+ + ++ N+V +AE
Sbjct: 131 KVNNELEDLRGKDVKVRKLKDKLAKLESEQDIFIENAVNEVEKKAE 176
>AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform b protein.
Length = 619
Score = 26.6 bits (56), Expect = 6.2
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 210 KANETKEDVEGLRLRLSDLQKNILKIESDAE-QVKQEANDVVLRAE 344
K N ED+ G +++ L+ + K+ES+ + ++ N+V +AE
Sbjct: 131 KVNNELEDLRGKDVKVRKLKDKLAKLESEQDIFIENAVNEVEKKAE 176
>AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform c protein.
Length = 621
Score = 26.6 bits (56), Expect = 6.2
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 210 KANETKEDVEGLRLRLSDLQKNILKIESDAE-QVKQEANDVVLRAE 344
K N ED+ G +++ L+ + K+ES+ + ++ N+V +AE
Sbjct: 131 KVNNELEDLRGKDVKVRKLKDKLAKLESEQDIFIENAVNEVEKKAE 176
>AC006736-2|AAF60493.1| 529|Caenorhabditis elegans Abnormal cell
migration protein1, isoform b protein.
Length = 529
Score = 26.6 bits (56), Expect = 6.2
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 283 LSIFFCKSERRKRKPSTSSFVSLAFFCASSVSVAIGI 173
LSI+F + E T+ F S FCA+SV + I
Sbjct: 238 LSIYFRRLEMLHSLTETAMFFSCISFCATSVIYIVSI 274
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 26.2 bits (55), Expect = 8.2
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +3
Query: 207 KKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQARQLRQDFK 386
++ + +V L + LQK+ E AE+ + +AN++ + E + L Q +
Sbjct: 146 RERQRVQHEVIELTATIDQLQKDKHTAEKAAERFEAQANELANKVEDLNKHVNDLAQQRQ 205
Query: 387 R 389
R
Sbjct: 206 R 206
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 26.2 bits (55), Expect = 8.2
Identities = 15/60 (25%), Positives = 32/60 (53%)
Frame = +3
Query: 183 ATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQA 362
A+ ELAQ+K ++++ +E + L+ + + ESD +++ D+ + + AE A
Sbjct: 1756 ASANELAQEKVRKSQQQLEQMTADLAMERSVCERTESDKIALERANRDLKQQLQDAENTA 1815
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 26.2 bits (55), Expect = 8.2
Identities = 15/60 (25%), Positives = 32/60 (53%)
Frame = +3
Query: 183 ATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQA 362
A+ ELAQ+K ++++ +E + L+ + + ESD +++ D+ + + AE A
Sbjct: 1756 ASANELAQEKVRKSQQQLEQMTADLAMERSVCERTESDKIALERANRDLKQQLQDAENTA 1815
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 26.2 bits (55), Expect = 8.2
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +3
Query: 207 KKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQARQLRQDFK 386
++ + +V L + LQK+ E AE+ + +AN++ + E + L Q +
Sbjct: 146 RERQRVQHEVIELTATIDQLQKDKHTAEKAAERFEAQANELANKVEDLNKHVNDLAQQRQ 205
Query: 387 R 389
R
Sbjct: 206 R 206
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 26.2 bits (55), Expect = 8.2
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +3
Query: 207 KKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQARQLRQDFK 386
++ + +V L + LQK+ E AE+ + +AN++ + E + L Q +
Sbjct: 162 RERQRVQHEVIELTATIDQLQKDKHTAEKAAERFEAQANELANKVEDLNKHVNDLAQQRQ 221
Query: 387 R 389
R
Sbjct: 222 R 222
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 26.2 bits (55), Expect = 8.2
Identities = 15/60 (25%), Positives = 32/60 (53%)
Frame = +3
Query: 183 ATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQQA 362
A+ ELAQ+K ++++ +E + L+ + + ESD +++ D+ + + AE A
Sbjct: 1756 ASANELAQEKVRKSQQQLEQMTADLAMERSVCERTESDKIALERANRDLKQQLQDAENTA 1815
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,538,420
Number of Sequences: 27780
Number of extensions: 96934
Number of successful extensions: 528
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 587646290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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