Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_A15
         (448 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024761-15|AAM97968.1|  231|Caenorhabditis elegans Hypothetical...   100   4e-22
U37429-15|AAN63412.1|  195|Caenorhabditis elegans Peroxiredoxin ...    50   1e-06
Z32683-2|CAA83619.1|  226|Caenorhabditis elegans Hypothetical pr...    47   5e-06
Z92830-8|CAB07353.1|  537|Caenorhabditis elegans Hypothetical pr...    29   1.2  
Z81470-2|CAB03882.2|  422|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z82278-4|CAB05257.2|  487|Caenorhabditis elegans Hypothetical pr...    28   2.7  
Z68120-3|CAA92201.1|  266|Caenorhabditis elegans Hypothetical pr...    28   2.7  
U58761-6|AAB00716.1|  312|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U41279-19|AAK31428.1|  357|Caenorhabditis elegans Hypothetical p...    27   8.2  

>AC024761-15|AAM97968.1|  231|Caenorhabditis elegans Hypothetical
           protein Y38C1AA.11 protein.
          Length = 231

 Score =  100 bits (240), Expect = 4e-22
 Identities = 48/101 (47%), Positives = 65/101 (64%), Gaps = 2/101 (1%)
 Frame = +1

Query: 151 MLLGDLFPNFTAVTTDGKIE-FYEWLGNSWGILFSHPSDFTPVCTTELARILKLLPDFTK 327
           M LGD  PNFT  T   K +  + ++G  W +LFSHP+DFTPVCTTELA ++KL P+F K
Sbjct: 1   MKLGDTVPNFTFETDLRKNQTLHNYIGEQWLMLFSHPADFTPVCTTELAELVKLAPEFRK 60

Query: 328 RNTKVIGLSCDSIESHIEWCNDIKSYASY-NVDEVFPYPII 447
           R+ +++ +S DS E+H +W  DI S A   N     P+ II
Sbjct: 61  RHVQILAISIDSSETHRDWAKDINSVAQLSNCGSHLPFEII 101


>U37429-15|AAN63412.1|  195|Caenorhabditis elegans Peroxiredoxin
           protein 2 protein.
          Length = 195

 Score = 49.6 bits (113), Expect = 1e-06
 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
 Frame = +1

Query: 148 KMLLGDLFPNF-TAVTTDGK---IEFYEWLGNSWGILFSHPSDFTPVCTTELARILKLLP 315
           K  +G   P F T    DG+   +   ++ G  + +LF +P DFT VC TE+        
Sbjct: 3   KAFIGKPAPQFKTQAVVDGEFVDVSLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSDRAE 61

Query: 316 DFTKRNTKVIGLSCDSIESHIEWCNDIKSY 405
           +F   NT V+  S DS+ SH+ W N  + +
Sbjct: 62  EFKAINTVVLAASTDSVFSHLAWINQPRKH 91


>Z32683-2|CAA83619.1|  226|Caenorhabditis elegans Hypothetical
           protein R07E5.2 protein.
          Length = 226

 Score = 47.2 bits (107), Expect = 5e-06
 Identities = 24/74 (32%), Positives = 34/74 (45%)
 Frame = +1

Query: 169 FPNFTAVTTDGKIEFYEWLGNSWGILFSHPSDFTPVCTTELARILKLLPDFTKRNTKVIG 348
           F     V  D K+   +     W ++F +P DFT VC TE+        +F     +V+ 
Sbjct: 42  FKGTAVVDGDFKVISDQDYKGKWLVMFFYPLDFTFVCPTEIIAYGDRANEFRSLGAEVVA 101

Query: 349 LSCDSIESHIEWCN 390
            SCDS  SH+ W N
Sbjct: 102 CSCDSHFSHLAWVN 115


>Z92830-8|CAB07353.1|  537|Caenorhabditis elegans Hypothetical
           protein F11A5.9 protein.
          Length = 537

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -2

Query: 441 WIWKYLIHIITCITFNVIAPLY 376
           W W +++H +T   FN++  +Y
Sbjct: 472 WWWVWMVHFVTLFVFNIVFQIY 493


>Z81470-2|CAB03882.2|  422|Caenorhabditis elegans Hypothetical
           protein C14A6.2 protein.
          Length = 422

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = +2

Query: 215 MNGSEIHGESFSLIHPILHQFALLSWHGYSNFCLISPRETPKLLVYHVI 361
           + G  +    F+   P+L QF +  + G+S+  +    ET KL +Y+ I
Sbjct: 238 IGGYSVEKTGFAAAVPVLFQFFMKLFAGHSSDRISGVSETTKLRIYNTI 286


>Z82278-4|CAB05257.2|  487|Caenorhabditis elegans Hypothetical
           protein M162.5 protein.
          Length = 487

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = +2

Query: 215 MNGSEIHGESFSLIHPILHQFALLSWHGYSNFCLISPRETPKLLVYHVI 361
           + G  +    F+   P+L QF +  + G+S+  +    ET KL +Y+ I
Sbjct: 303 IGGYSVEKTGFAAAVPVLFQFFMKLFAGHSSDRISGISETTKLRIYNTI 351


>Z68120-3|CAA92201.1|  266|Caenorhabditis elegans Hypothetical
           protein T24C2.3 protein.
          Length = 266

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +1

Query: 286 ELARILKLLPDFTKRNTKVIGLSCDSIESHIEWCNDIKSYASYNVDEVFPY 438
           +L + LKL  D  KRNT  + LS DS +  +        + SY + + F Y
Sbjct: 148 DLVKFLKLGDDLVKRNTAALPLSFDSYD--VPELPASCDFVSYQMPQQFHY 196


>U58761-6|AAB00716.1|  312|Caenorhabditis elegans Hypothetical
           protein C01F1.2 protein.
          Length = 312

 Score = 27.1 bits (57), Expect = 6.2
 Identities = 10/42 (23%), Positives = 26/42 (61%)
 Frame = +1

Query: 187 VTTDGKIEFYEWLGNSWGILFSHPSDFTPVCTTELARILKLL 312
           + TDGK+E  + L  +W +++   ++   +C  E+ +++K++
Sbjct: 144 MNTDGKMEGSQELRGNWLLMYFGFTNCPDICPDEIEKMVKVV 185


>U41279-19|AAK31428.1|  357|Caenorhabditis elegans Hypothetical
           protein C17C3.1a protein.
          Length = 357

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +1

Query: 187 VTTDGKIEFYEWLGNSWGILFSHPSDFTPV 276
           V  D  I   E LGNSW +  +HP   T V
Sbjct: 6   VNWDSDIRHLEPLGNSWEVPSNHPVIMTTV 35


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,489,271
Number of Sequences: 27780
Number of extensions: 206494
Number of successful extensions: 455
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 454
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 777938954
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)