Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_A15
         (448 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    25   0.29 
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   4.6  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   4.6  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   6.1  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         21   6.1  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    21   6.1  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    21   6.1  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   6.1  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 25.4 bits (53), Expect = 0.29
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -3

Query: 371 DSIESHDKPITLVFLLVKSGKSLSI 297
           +++ESH+   T VFLL+K+   LS+
Sbjct: 692 NTMESHEVRCTAVFLLMKTNPPLSM 716


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = -1

Query: 427 PHPHYNLHNF*CHCTTLYVIR 365
           PH      N   H  T+YV+R
Sbjct: 257 PHLELTFENILSHINTVYVLR 277


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = -1

Query: 427 PHPHYNLHNF*CHCTTLYVIR 365
           PH      N   H  T+YV+R
Sbjct: 257 PHLELTFENILSHINTVYVLR 277


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 275 FALLSWHGYSN 307
           F +L+W GYSN
Sbjct: 307 FQVLTWLGYSN 317


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 221 GSEIHGESFSLIHPILHQFALLSW 292
           G+ + GES +   PILH++    +
Sbjct: 19  GNILRGESLNKSLPILHEWKFFDY 42


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 221 GSEIHGESFSLIHPILHQFALLSW 292
           G+ + GES +   PILH++    +
Sbjct: 19  GNILRGESLNKSLPILHEWKFFDY 42


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 221 GSEIHGESFSLIHPILHQFALLSW 292
           G+ + GES +   PILH++    +
Sbjct: 19  GNILRGESLNKSLPILHEWKFFDY 42


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = +1

Query: 268 TPVCTTELARILKLLPDFTKRNTKVIGLSCDSIES 372
           T VC+     +   L +F    + VIG  C  + S
Sbjct: 27  TDVCSASNGELFLALLNFFVATSPVIGEPCQRVHS 61


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,803
Number of Sequences: 438
Number of extensions: 2333
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11697255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)