Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_A13
(362 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0741 + 31408615-31409130 33 0.069
11_06_0012 + 19251085-19251666 32 0.12
07_01_0866 - 7195305-7195756,7197171-7197447 31 0.28
07_01_0467 - 3524598-3524837,3524939-3525466,3526242-3526892,352... 31 0.37
09_01_0040 + 744733-745269 29 0.85
12_02_0193 + 15242068-15242265,15242356-15244589,15244675-152449... 29 1.1
12_01_0436 - 3436886-3437559,3438738-3438924 29 1.1
05_01_0445 + 3547176-3547577,3548625-3549557,3550246-3550524,355... 29 1.1
12_01_0830 - 7678038-7678444,7678996-7680943,7681231-7681983,768... 28 2.0
11_06_0217 - 21353558-21353660,21354680-21355510,21356340-213564... 28 2.0
03_03_0174 - 15124079-15124115,15124198-15124302,15124333-151249... 28 2.0
01_06_1827 + 40169001-40169263,40169358-40169472,40170090-401702... 28 2.0
01_01_0836 + 6527902-6528218,6529280-6529632,6529722-6529889,653... 28 2.0
05_03_0616 - 16227467-16228321 28 2.6
04_04_1035 + 30283456-30283536,30284823-30285359,30285508-302865... 28 2.6
02_05_0328 + 27984086-27984793 28 2.6
12_02_0640 - 21447470-21448309 27 3.4
12_02_0635 - 21430245-21431156 27 3.4
12_02_0046 + 12830974-12832386 27 3.4
12_01_0612 - 5044639-5044858,5045010-5045167,5045440-5045684,504... 27 3.4
01_06_1439 + 37374739-37375473 27 3.4
11_01_0548 + 4322875-4323213 27 4.5
10_01_0274 - 2901033-2901778,2902475-2902634 27 4.5
06_03_1310 + 29238644-29240260 27 4.5
05_05_0060 - 22015440-22015481,22015572-22015709,22016704-220167... 27 4.5
05_05_0009 + 21485254-21485426,21485512-21485734 27 4.5
02_05_1145 + 34429060-34429401,34430053-34430967 27 4.5
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969... 27 4.5
01_06_0314 - 28410897-28410902,28410995-28411054,28411149-28411697 27 4.5
11_06_0428 - 23393368-23393628 27 6.0
10_01_0358 - 3941313-3941328,3942374-3942693,3942774-3942912,394... 27 6.0
06_02_0356 - 15118498-15119217,15120020-15120238,15120320-15120634 27 6.0
05_06_0184 + 26198003-26198518 27 6.0
04_04_1108 + 30961600-30962013,30963131-30964465 27 6.0
03_01_0515 - 3864796-3865425 27 6.0
03_01_0161 + 1307206-1307769,1307979-1308101,1308182-1308286,130... 27 6.0
02_05_0365 - 28309587-28310132 27 6.0
12_02_0893 + 24077634-24078379,24079347-24080412,24080741-240808... 26 7.9
04_04_1651 - 35057525-35057680,35058302-35058311,35058429-350585... 26 7.9
>02_05_0741 + 31408615-31409130
Length = 171
Score = 33.1 bits (72), Expect = 0.069
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -3
Query: 339 PPTARCSPPVRWPARRERRVLRPTAGPRDPGSRARPATRTLPPVVV 202
P RC+ RW R+ERR+LRP P + P LPP V+
Sbjct: 84 PLRPRCTRIRRWQ-RQERRILRPLLLPCRSRHLSTPTHSNLPPAVI 128
>11_06_0012 + 19251085-19251666
Length = 193
Score = 32.3 bits (70), Expect = 0.12
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = -3
Query: 348 GSTPPTARCSPPVRWPARRERRVLRPTAGPRDPGSR 241
G P A S RWPARR RR LRP G R
Sbjct: 146 GRWPAGAVASQRGRWPARRRRRGLRPGGAKSAAGGR 181
>07_01_0866 - 7195305-7195756,7197171-7197447
Length = 242
Score = 31.1 bits (67), Expect = 0.28
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -3
Query: 321 SPPVRW-PARRERRVLRPTAGPRDPGSRARPATRTLPPVV 205
+PP W P RE R RP++GPR P R R LP +V
Sbjct: 158 APPNNWCPWGREGRA-RPSSGPRHPDPLRRDLHRRLPCLV 196
>07_01_0467 -
3524598-3524837,3524939-3525466,3526242-3526892,
3527015-3527500,3527580-3527792,3527885-3528174,
3528276-3528418,3528633-3528855,3528983-3529160,
3529598-3529867
Length = 1073
Score = 30.7 bits (66), Expect = 0.37
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +2
Query: 38 PTVCTTTTAASSGDKSGDRATGLLAAVDRLLSFNRAYGRS 157
PTV T A D+ GD A G L D S +++YG S
Sbjct: 648 PTVTATYPAVIDSDEEGDEAGGFLRLRDSQKSASKSYGIS 687
>09_01_0040 + 744733-745269
Length = 178
Score = 29.5 bits (63), Expect = 0.85
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -3
Query: 321 SPPVRW-PARRERRVLRPTAGPRDPGSRARPATRTLPPVV 205
+PP W P RE R RP++GPR P R + LP +V
Sbjct: 59 APPNNWCPWGREGRA-RPSSGPRHPDPLRRDLHQRLPCLV 97
>12_02_0193 +
15242068-15242265,15242356-15244589,15244675-15244926,
15245007-15245117,15245207-15245288,15245563-15245754
Length = 1022
Score = 29.1 bits (62), Expect = 1.1
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -3
Query: 342 TPPTARCSPPVRWPARRERRVLRPTAGPRDPGSRARPATRTLPPVVVSYYP 190
TPP+ + SPP+ A E +V P +P S R +P ++ +Y P
Sbjct: 628 TPPSVQTSPPIPQSALVE-QVHIPDGTTSEPKSNTLEPRRIIPKLISTYDP 677
>12_01_0436 - 3436886-3437559,3438738-3438924
Length = 286
Score = 29.1 bits (62), Expect = 1.1
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -3
Query: 357 PCCGSTPPTARCSPPVRWPARRERRVLRPTAGPRDPGSR 241
P +T RC PP R A E + L P AG DP S+
Sbjct: 165 PPTTTTAAAHRCPPPPRTDALLESQELSPGAGGGDPYSQ 203
>05_01_0445 +
3547176-3547577,3548625-3549557,3550246-3550524,
3550624-3550752,3550813-3550869
Length = 599
Score = 29.1 bits (62), Expect = 1.1
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +2
Query: 2 HEGRLGLQPALAPTVCTTTTAASSGDKSGDRATGLLAAVDRLLSFNRAYGRSGSYRATS 178
H RL Q A A + +T++SS S G + + +FN GR G ATS
Sbjct: 36 HRLRLPAQAAAAAAASSPSTSSSSSSSSTPAEGGGRLVAELVGAFNELTGRMGEGLATS 94
>12_01_0830 -
7678038-7678444,7678996-7680943,7681231-7681983,
7682701-7682824,7683590-7683723
Length = 1121
Score = 28.3 bits (60), Expect = 2.0
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = -3
Query: 129 SNRSTAASSPVALSPDLSPLEAAVVVVQTVGASAGCSP 16
S+RS+A+ + ++LSP S A+ ++ +S+ CSP
Sbjct: 93 SSRSSASPNRLSLSPRSSSSNTALTRTRSTNSSSRCSP 130
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -3
Query: 342 TPPTARC-SPPVRWPARRERRVLRPTAGPRDPGSRARPATRT 220
TPP + +PP R P+ RR+ ++GP G+R +T
Sbjct: 145 TPPGNKTLTPPRRSPSPASRRMSATSSGPTLNGTRGASPVKT 186
>11_06_0217 -
21353558-21353660,21354680-21355510,21356340-21356464,
21356546-21357076,21357207-21357650,21358469-21358612
Length = 725
Score = 28.3 bits (60), Expect = 2.0
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 8 GRLGLQPALAPTVCTTTTAASSGDKSG 88
GR+ L P LAP V T GD+SG
Sbjct: 457 GRVPLPPLLAPEVTKNTADGVGGDRSG 483
>03_03_0174 -
15124079-15124115,15124198-15124302,15124333-15124942,
15125081-15125462
Length = 377
Score = 28.3 bits (60), Expect = 2.0
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 315 PVRWPARRERRVLRPTAGPRDPG 247
PVRW + R RVLRP+ D G
Sbjct: 328 PVRWQSWRRPRVLRPSKDQADQG 350
>01_06_1827 +
40169001-40169263,40169358-40169472,40170090-40170201,
40170556-40170623,40170798-40170852,40170948-40171027,
40171811-40171924,40172178-40172296,40173064-40173181,
40173264-40173394,40173535-40173688,40173922-40174017
Length = 474
Score = 28.3 bits (60), Expect = 2.0
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = -3
Query: 339 PPTARCSPPVRWPARRERRVLRPTAGPRDPGSRARPATRTLPP 211
PP A P WPA R+ PT P +R RP PP
Sbjct: 2 PPPAGLLP---WPAPSAARLAAPTRTRPPPRTRVRPPPPPAPP 41
>01_01_0836 +
6527902-6528218,6529280-6529632,6529722-6529889,
6530004-6530051,6530142-6530372,6530435-6530548,
6530638-6530723
Length = 438
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -3
Query: 345 STPPTARCSPPVRWPARRERRVLRPTAGPRDPGSRARPA 229
S+PP + PP P +R RR P A P + ARP+
Sbjct: 18 SSPPASLLLPP---PRKRARRQAAPPAAPAPAPAPARPS 53
>05_03_0616 - 16227467-16228321
Length = 284
Score = 27.9 bits (59), Expect = 2.6
Identities = 18/80 (22%), Positives = 29/80 (36%)
Frame = -3
Query: 243 RARPATRTLPPVVVSYYPMIXXXXXXXXXXXXXXXLNDSNRSTAASSPVALSPDLSPLEA 64
R A PPVVV+ P++ +D + +T + +P SP
Sbjct: 196 RGAAAAAAAPPVVVAPPPVVTAPDDATGTSGGAGEDDDDDEATHSGEQQDTTPAASPTTP 255
Query: 63 AVVVVQTVGASAGCSPKRPS 4
V T A+A + + S
Sbjct: 256 PATSVGTTTAAATAAAAKGS 275
>04_04_1035 + 30283456-30283536,30284823-30285359,30285508-30286512,
30286718-30287042,30287563-30287818,30287901-30288117,
30288743-30289095,30289330-30289833,30291267-30292467,
30292614-30292970,30293258-30293495,30294083-30295125,
30295234-30296649,30296731-30296855,30297036-30297314,
30297352-30297382,30298957-30299022,30299447-30299689,
30299848-30299898,30299980-30300071,30300182-30300249,
30300515-30300600,30300720-30300824,30300994-30301127,
30302403-30302436,30302620-30302892,30303019-30303288,
30303384-30303974,30304065-30304214
Length = 3376
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 92 RATGLLAAVDRLLSFNRAYGRSGSYRAT 175
RA GLLA DR++S N G+S +A+
Sbjct: 1639 RAAGLLATADRVISTNFEMGQSSLQKAS 1666
>02_05_0328 + 27984086-27984793
Length = 235
Score = 27.9 bits (59), Expect = 2.6
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = -3
Query: 123 RSTAASSPVALSPDLSPLE----AAVVVVQTVGASAGCSPKRP 7
++T S+P A P LS L AAV++ T A+ C+P P
Sbjct: 31 KATGGSNPAAPHPVLSSLRLAASAAVILAATSPAAIACTPAPP 73
>12_02_0640 - 21447470-21448309
Length = 279
Score = 27.5 bits (58), Expect = 3.4
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = -3
Query: 345 STPPTARCSPPVRWPARRERRVLRPTAGPRDPGSRARPAT 226
S P AR PP R + R RP P PGS +PAT
Sbjct: 204 SRRPPARTPPPERRESPSPPRG-RPRTPPPPPGSPKKPAT 242
>12_02_0635 - 21430245-21431156
Length = 303
Score = 27.5 bits (58), Expect = 3.4
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = -3
Query: 345 STPPTARCSPPVRWPARRERRVLRPTAGPRDPGSRARPAT 226
S P AR PP R + R RP P PGS +PAT
Sbjct: 201 SRRPPARTPPPERRESPSPPRG-RPRTPPPPPGSPKKPAT 239
>12_02_0046 + 12830974-12832386
Length = 470
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = -3
Query: 354 CCGSTPPTARCSPPVRWPARRERRVLRPTAG-PRDP 250
C ++ P C PP PA RRV+ P P DP
Sbjct: 304 CVAASAPPPWCVPPPPRPAPPSRRVMAPLPPYPMDP 339
>12_01_0612 -
5044639-5044858,5045010-5045167,5045440-5045684,
5046006-5046294,5047540-5048561,5049320-5049389
Length = 667
Score = 27.5 bits (58), Expect = 3.4
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = -3
Query: 354 CCGSTPPTARCSPPVRWPARRERRVLRPTAGPRDPGSRARPATRTLP 214
C T A P + W AR L P R S RPA R P
Sbjct: 44 CAPCTSSNAAPKPAMAWQARSGNGSLHPPGNGRVQHSDHRPAARGSP 90
>01_06_1439 + 37374739-37375473
Length = 244
Score = 27.5 bits (58), Expect = 3.4
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = -3
Query: 345 STPPTARCSPPVRWPARRERRV---LRPTAGPRDPGSR 241
S PP +PP WP+ + R TA P PGSR
Sbjct: 22 SPPPAPATAPPWVWPSCKNPRTQSFRAATAPPPPPGSR 59
>11_01_0548 + 4322875-4323213
Length = 112
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 360 CPCCGSTPPTARCSPPV 310
C CCG PP A S PV
Sbjct: 90 CCCCGRLPPPASSSSPV 106
>10_01_0274 - 2901033-2901778,2902475-2902634
Length = 301
Score = 27.1 bits (57), Expect = 4.5
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = -3
Query: 357 PCCGSTPPTARCSPPVRWPARRERRVLRPTAGPRDPGSRARPATRTLPP 211
P G+ P CSPP P + P P DPG +PA PP
Sbjct: 178 PVYGTPAPGCSCSPPSTPPGYGQP---APECPPADPG-YGQPAPECPPP 222
>06_03_1310 + 29238644-29240260
Length = 538
Score = 27.1 bits (57), Expect = 4.5
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = -3
Query: 348 GSTPPTARCSPPVRWPARRERRVLRPTAGPRDPGSRAR-PATRTLPP 211
G++PP++ SPP P + P PG A P T + PP
Sbjct: 435 GASPPSSSSSPPTEHPGYVLPPLTPPPPTTTPPGHHAPVPGTPSSPP 481
>05_05_0060 -
22015440-22015481,22015572-22015709,22016704-22016799,
22016911-22017135
Length = 166
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -3
Query: 114 AASSPVALSPDLSPLEAAVVVVQTVGASAGCSPKRPS 4
A + P P L P EAA V + G +P+RPS
Sbjct: 2 ATTRPARSDPHLPPEEAARVEAEVRGYFDSMAPRRPS 38
>05_05_0009 + 21485254-21485426,21485512-21485734
Length = 131
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 327 RCSPPVRWPARRERRVLRPTAG 262
RC +RWP RR+R + + TAG
Sbjct: 69 RCPFGLRWPKRRQRILGKETAG 90
>02_05_1145 + 34429060-34429401,34430053-34430967
Length = 418
Score = 27.1 bits (57), Expect = 4.5
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -3
Query: 345 STPPTARCSPPVRW-PARRERRVLRPTAGPRDPGSRARPATRTLPP 211
S P + R PPV PAR + RP+A P G+ A T L P
Sbjct: 219 SAPVSPRPEPPVLVIPARARSKRSRPSAFPAVRGAPAATETTILVP 264
>01_06_1678 -
39095986-39096205,39096400-39096477,39096578-39096949,
39097374-39097671,39097867-39098077,39098331-39099023
Length = 623
Score = 27.1 bits (57), Expect = 4.5
Identities = 25/64 (39%), Positives = 28/64 (43%), Gaps = 10/64 (15%)
Frame = -3
Query: 357 PCCGSTPPTARCSPPVRWPARRERR--------VLRPT--AGPRDPGSRARPATRTLPPV 208
PC PP R P+ WPARR+R L P AGP DP RAR P
Sbjct: 147 PCRVPPPPGYR--QPMAWPARRDRAWYANVELPPLAPAKLAGPPDP-VRARGDWLVFPKG 203
Query: 207 VVSY 196
V +Y
Sbjct: 204 VGTY 207
>01_06_0314 - 28410897-28410902,28410995-28411054,28411149-28411697
Length = 204
Score = 27.1 bits (57), Expect = 4.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -3
Query: 111 ASSPVALSPDL-SPLEAAVVVVQTVGASAGCSPKR 10
ASSP +PD SP + T G GCSP+R
Sbjct: 66 ASSPPPAAPDTPSPDKEKAAHRSTDGVGGGCSPQR 100
>11_06_0428 - 23393368-23393628
Length = 86
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 8 GRLGLQPALAPTVCTTTTAASSGDKSG 88
GRL + P CTT AAS GD G
Sbjct: 56 GRLDTRRRRRPAGCTTAAAASIGDIDG 82
>10_01_0358 -
3941313-3941328,3942374-3942693,3942774-3942912,
3943441-3943543,3944745-3944890,3944941-3945314,
3946416-3946512,3947118-3947566
Length = 547
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -3
Query: 66 AAVVVVQTVGASAGCSPKRPSC 1
AAVVVV T AS GCS R +C
Sbjct: 82 AAVVVVATATASGGCS-NRATC 102
>06_02_0356 - 15118498-15119217,15120020-15120238,15120320-15120634
Length = 417
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 312 VRWPARR-ERRVL-RPTAGPRDPGSRARPATRTLPPVV 205
++WP E + RP + R P +R P +LPP V
Sbjct: 210 IQWPKHSIEINITPRPASSSRSPPTRPHPTVVSLPPTV 247
>05_06_0184 + 26198003-26198518
Length = 171
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -3
Query: 357 PCCGSTPPTARCSPPVRWPARRERRVLRPTAGPRDPGSRARPATR 223
P S+P ++R +P + A R +RP P P RP R
Sbjct: 26 PHASSSPSSSRRTPECHFSASVHRHQIRPGHQPSRPPRGRRPNAR 70
>04_04_1108 + 30961600-30962013,30963131-30964465
Length = 582
Score = 26.6 bits (56), Expect = 6.0
Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = -3
Query: 360 CPCCGSTPPTARCSPPVRWPARRERRVLRPTAGPRDPGSRARPATRT--LPPVVVS 199
CP CG A+ PP P R R + P P + PAT T PP VS
Sbjct: 30 CPDCGM----AQALPPELMPPRPRRALPLPGRASVVPSAVPAPATATAAAPPTRVS 81
>03_01_0515 - 3864796-3865425
Length = 209
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = -3
Query: 342 TPPTARCSPPVRWPARRERRVLRPTAGPRDPGSRARPATRTLPP 211
+PPT PP+ P P AGP P P+ + PP
Sbjct: 41 SPPTEASPPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPP 84
>03_01_0161 +
1307206-1307769,1307979-1308101,1308182-1308286,
1308688-1308867,1308988-1309050,1309151-1309345,
1309704-1309805,1309885-1309947,1310045-1310113,
1310215-1310270,1310587-1310755
Length = 562
Score = 26.6 bits (56), Expect = 6.0
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -3
Query: 345 STPPTARCSPPVRWPARRERRVLRPTAGPRDPGSRARPATRTL 217
S PPT +P R A RV P S PA+RT+
Sbjct: 7 SKPPTPASTPSSRLAAAPSSRVSSAAPHPSPSSSAPTPASRTV 49
>02_05_0365 - 28309587-28310132
Length = 181
Score = 26.6 bits (56), Expect = 6.0
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -3
Query: 339 PPTARCSPPVRWPARRERRVLRPTAGPRDPGSRARPATR 223
PP+ R SPP+ W A L P P P +RA R
Sbjct: 20 PPSLRPSPPLSWSASIAHLALSP---PPVPSNRASLVVR 55
>12_02_0893 +
24077634-24078379,24079347-24080412,24080741-24080866,
24081278-24081384,24081720-24081744
Length = 689
Score = 26.2 bits (55), Expect = 7.9
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = +2
Query: 50 TTTTAASSGDKSGDRATGLLAAVD----RLLSFNRAYGRSG 160
TTT A S + D G AAVD R + + A GRSG
Sbjct: 54 TTTAAGGSATATADPVVGRAAAVDPAMGRTAAADSATGRSG 94
>04_04_1651 -
35057525-35057680,35058302-35058311,35058429-35058569,
35058675-35058784,35058907-35059006,35059108-35059308,
35059674-35059879,35060504-35060716,35060785-35060923,
35061370-35061606,35061688-35061893,35062664-35062759,
35062900-35063040
Length = 651
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 101 GLLAAVDRLLSFNRAYGRSGSYRAT 175
G L AVDRL S R + + SYR++
Sbjct: 94 GFLDAVDRLRSIERFFSSNRSYRSS 118
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,353,488
Number of Sequences: 37544
Number of extensions: 120302
Number of successful extensions: 772
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 566473892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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