Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_A11
         (546 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094841-1|AAM11194.1|  204|Drosophila melanogaster RE01373p pro...   266   1e-71
AF030251-1|AAB84223.1|  204|Drosophila melanogaster ribosomal L1...   266   1e-71
AF184230-1|AAD55741.1|  655|Drosophila melanogaster BcDNA.LD2812...    28   9.5  
AE014298-2834|AAF48949.1|  655|Drosophila melanogaster CG8062-PA...    28   9.5  

>AY094841-1|AAM11194.1|  204|Drosophila melanogaster RE01373p
           protein.
          Length = 204

 Score =  266 bits (653), Expect = 1e-71
 Identities = 126/173 (72%), Positives = 136/173 (78%)
 Frame = +2

Query: 26  MGAYRYIQELYRKKLSDVMRFLLRIRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQCYV 205
           MGAYRY+QELYRKK SDVMR+LLRIRVWQYRQLT++HR+PRPTRPDKARRLGYRAKQ +V
Sbjct: 1   MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFV 60

Query: 206 IFRIXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXNSYW 385
           I+RI               TYGKPKSHGVNQLKP R LQSIAEE            NSYW
Sbjct: 61  IYRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYW 120

Query: 386 VAQDSSYKYFEVILIDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGKSSRG 544
           +AQD+SYKYFEVILID  H AIRRDPKINWI   VHKHRE+RGLTSAGKSSRG
Sbjct: 121 IAQDASYKYFEVILIDTHHSAIRRDPKINWICKHVHKHRELRGLTSAGKSSRG 173


>AF030251-1|AAB84223.1|  204|Drosophila melanogaster ribosomal L15
           (YL10) protein homologueprotein.
          Length = 204

 Score =  266 bits (653), Expect = 1e-71
 Identities = 126/173 (72%), Positives = 136/173 (78%)
 Frame = +2

Query: 26  MGAYRYIQELYRKKLSDVMRFLLRIRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQCYV 205
           MGAYRY+QELYRKK SDVMR+LLRIRVWQYRQLT++HR+PRPTRPDKARRLGYRAKQ +V
Sbjct: 1   MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFV 60

Query: 206 IFRIXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXNSYW 385
           I+RI               TYGKPKSHGVNQLKP R LQSIAEE            NSYW
Sbjct: 61  IYRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYW 120

Query: 386 VAQDSSYKYFEVILIDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGKSSRG 544
           +AQD+SYKYFEVILID  H AIRRDPKINWI   VHKHRE+RGLTSAGKSSRG
Sbjct: 121 IAQDASYKYFEVILIDTHHSAIRRDPKINWICKHVHKHRELRGLTSAGKSSRG 173


>AF184230-1|AAD55741.1|  655|Drosophila melanogaster BcDNA.LD28120
           protein.
          Length = 655

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -3

Query: 328 NRLQVASGFQLVDTMALGFAVGSSLG 251
           NRL  ASG QL+      FA+G  LG
Sbjct: 585 NRLPAASGLQLIFNTIFSFAMGPILG 610


>AE014298-2834|AAF48949.1|  655|Drosophila melanogaster CG8062-PA
           protein.
          Length = 655

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -3

Query: 328 NRLQVASGFQLVDTMALGFAVGSSLG 251
           NRL  ASG QL+      FA+G  LG
Sbjct: 585 NRLPAASGLQLIFNTIFSFAMGPILG 610


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,299,792
Number of Sequences: 53049
Number of extensions: 480424
Number of successful extensions: 1166
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2069139900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)