Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_A10
(284 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058729-1|AAL13958.1| 439|Drosophila melanogaster LD47530p pro... 32 0.13
AF163664-1|AAF18387.1| 439|Drosophila melanogaster FK506-bindin... 32 0.13
AE014134-1709|AAF52818.1| 439|Drosophila melanogaster CG4535-PA... 32 0.13
AY071291-1|AAL48913.1| 535|Drosophila melanogaster RE31829p pro... 27 4.9
AF124503-1|AAD31692.1| 520|Drosophila melanogaster DNA repair p... 27 4.9
AF076839-1|AAC95521.1| 520|Drosophila melanogaster Rad17-like p... 27 4.9
AE014297-1884|AAF55086.2| 535|Drosophila melanogaster CG7825-PA... 27 4.9
M59076-1|AAA28679.1| 1302|Drosophila melanogaster P glycoprotein... 26 6.5
AY128471-1|AAM75064.1| 1204|Drosophila melanogaster RE24967p pro... 26 6.5
AY058791-1|AAL14020.1| 1302|Drosophila melanogaster SD10012p pro... 26 6.5
AE013599-3599|AAF47000.2| 1204|Drosophila melanogaster CG3520-PA... 26 6.5
AE013599-1620|AAF58437.2| 1302|Drosophila melanogaster CG3879-PA... 26 6.5
AY061825-1|AAL27636.1| 1014|Drosophila melanogaster GH19218p pro... 26 8.6
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 26 8.6
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 26 8.6
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 26 8.6
AE014134-3537|AAF57227.2| 1014|Drosophila melanogaster CG31619-P... 26 8.6
AE014134-3536|AAF57229.2| 1353|Drosophila melanogaster CG31619-P... 26 8.6
AE014134-3535|ABI31328.1| 1394|Drosophila melanogaster CG31619-P... 26 8.6
AE013599-3406|AAF46855.2| 1995|Drosophila melanogaster CG4444-PA... 26 8.6
AB032181-1|BAA86717.1| 1990|Drosophila melanogaster plexus protein. 26 8.6
>AY058729-1|AAL13958.1| 439|Drosophila melanogaster LD47530p
protein.
Length = 439
Score = 31.9 bits (69), Expect = 0.13
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +3
Query: 6 RQMYANMFDKFAKHDTEVEMIKAREQIDVIGEKVGEWGAGEGEWTDEQRDRKPTEFEKEN 185
+++YANMF K A +D E E + DV+ K GEW E+ ++ E E
Sbjct: 386 KKLYANMFTKLAANDKETE---PPRETDVL-SKCGEW--------SEEDAKREAELTLER 433
Query: 186 PNILLL 203
NI+++
Sbjct: 434 DNIIMI 439
>AF163664-1|AAF18387.1| 439|Drosophila melanogaster FK506-binding
protein FKBP59 protein.
Length = 439
Score = 31.9 bits (69), Expect = 0.13
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +3
Query: 6 RQMYANMFDKFAKHDTEVEMIKAREQIDVIGEKVGEWGAGEGEWTDEQRDRKPTEFEKEN 185
+++YANMF K A +D E E + DV+ K GEW E+ ++ E E
Sbjct: 386 KKLYANMFTKLAANDKETE---PPRETDVL-SKCGEW--------SEEDAKREAELTLER 433
Query: 186 PNILLL 203
NI+++
Sbjct: 434 DNIIMI 439
>AE014134-1709|AAF52818.1| 439|Drosophila melanogaster CG4535-PA
protein.
Length = 439
Score = 31.9 bits (69), Expect = 0.13
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +3
Query: 6 RQMYANMFDKFAKHDTEVEMIKAREQIDVIGEKVGEWGAGEGEWTDEQRDRKPTEFEKEN 185
+++YANMF K A +D E E + DV+ K GEW E+ ++ E E
Sbjct: 386 KKLYANMFTKLAANDKETE---PPRETDVL-SKCGEW--------SEEDAKREAELTLER 433
Query: 186 PNILLL 203
NI+++
Sbjct: 434 DNIIMI 439
>AY071291-1|AAL48913.1| 535|Drosophila melanogaster RE31829p
protein.
Length = 535
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 186 PNILLLDKDGQFENM*TNYKLFGR 257
PN+LL DK+ FE + Y +G+
Sbjct: 215 PNVLLSDKEVNFEELLEEYTAYGK 238
>AF124503-1|AAD31692.1| 520|Drosophila melanogaster DNA repair
protein Rad17 protein.
Length = 520
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 186 PNILLLDKDGQFENM*TNYKLFGR 257
PN+LL DK+ FE + Y +G+
Sbjct: 200 PNVLLSDKEVNFEELLEEYTAYGK 223
>AF076839-1|AAC95521.1| 520|Drosophila melanogaster Rad17-like
protein protein.
Length = 520
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 186 PNILLLDKDGQFENM*TNYKLFGR 257
PN+LL DK+ FE + Y +G+
Sbjct: 200 PNVLLSDKEVNFEELLEEYTAYGK 223
>AE014297-1884|AAF55086.2| 535|Drosophila melanogaster CG7825-PA
protein.
Length = 535
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 186 PNILLLDKDGQFENM*TNYKLFGR 257
PN+LL DK+ FE + Y +G+
Sbjct: 215 PNVLLSDKEVNFEELLEEYTAYGK 238
>M59076-1|AAA28679.1| 1302|Drosophila melanogaster P glycoprotein
protein.
Length = 1302
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 109 ESGEPERESGLTSRETGNPQSSRRKTRT 192
E EPE ++ +SR++G S+RRK R+
Sbjct: 677 EDEEPELQTSGSSRDSGFRASTRRKRRS 704
>AY128471-1|AAM75064.1| 1204|Drosophila melanogaster RE24967p
protein.
Length = 1204
Score = 26.2 bits (55), Expect = 6.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 66 IKAREQIDVIGEKVGEWGAGEGEWTDEQRDRKPTE 170
I A+ + +++G VG GAG E D Q++ P E
Sbjct: 708 IPAQFRFEIVGGGVGAGGAGGREVVDLQQETVPGE 742
>AY058791-1|AAL14020.1| 1302|Drosophila melanogaster SD10012p
protein.
Length = 1302
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 109 ESGEPERESGLTSRETGNPQSSRRKTRT 192
E EPE ++ +SR++G S+RRK R+
Sbjct: 677 EDEEPELQTSGSSRDSGFRASTRRKRRS 704
>AE013599-3599|AAF47000.2| 1204|Drosophila melanogaster CG3520-PA
protein.
Length = 1204
Score = 26.2 bits (55), Expect = 6.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 66 IKAREQIDVIGEKVGEWGAGEGEWTDEQRDRKPTE 170
I A+ + +++G VG GAG E D Q++ P E
Sbjct: 708 IPAQFRFEIVGGGVGAGGAGGREVVDLQQETVPGE 742
>AE013599-1620|AAF58437.2| 1302|Drosophila melanogaster CG3879-PA
protein.
Length = 1302
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 109 ESGEPERESGLTSRETGNPQSSRRKTRT 192
E EPE ++ +SR++G S+RRK R+
Sbjct: 677 EDEEPELQTSGSSRDSGFRASTRRKRRS 704
>AY061825-1|AAL27636.1| 1014|Drosophila melanogaster GH19218p
protein.
Length = 1014
Score = 25.8 bits (54), Expect = 8.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 181 KTRTYSCWTRTDSLRTCELITSYLEEKKKPH 273
+ RTY+C + RT + L E KKPH
Sbjct: 559 RRRTYNCKIFLEYSRTVATVNDSLCEGKKPH 589
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 163 PQSSRRKTRTYSCWTRTDSLRTCELITSYLEEKKK 267
P + + RTY+ R+ +LR E LEEKK+
Sbjct: 307 PPNRPQNNRTYNSSRRSTNLRLDEATKRLLEEKKE 341
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 163 PQSSRRKTRTYSCWTRTDSLRTCELITSYLEEKKK 267
P + + RTY+ R+ +LR E LEEKK+
Sbjct: 307 PPNRPQNNRTYNSSRRSTNLRLDEATKRLLEEKKE 341
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 163 PQSSRRKTRTYSCWTRTDSLRTCELITSYLEEKKK 267
P + + RTY+ R+ +LR E LEEKK+
Sbjct: 307 PPNRPQNNRTYNSSRRSTNLRLDEATKRLLEEKKE 341
>AE014134-3537|AAF57227.2| 1014|Drosophila melanogaster CG31619-PB,
isoform B protein.
Length = 1014
Score = 25.8 bits (54), Expect = 8.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 181 KTRTYSCWTRTDSLRTCELITSYLEEKKKPH 273
+ RTY+C + RT + L E KKPH
Sbjct: 559 RRRTYNCKIFLEYSRTVATVNDSLCEGKKPH 589
>AE014134-3536|AAF57229.2| 1353|Drosophila melanogaster CG31619-PA,
isoform A protein.
Length = 1353
Score = 25.8 bits (54), Expect = 8.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 181 KTRTYSCWTRTDSLRTCELITSYLEEKKKPH 273
+ RTY+C + RT + L E KKPH
Sbjct: 559 RRRTYNCKIFLEYSRTVATVNDSLCEGKKPH 589
>AE014134-3535|ABI31328.1| 1394|Drosophila melanogaster CG31619-PC,
isoform C protein.
Length = 1394
Score = 25.8 bits (54), Expect = 8.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 181 KTRTYSCWTRTDSLRTCELITSYLEEKKKPH 273
+ RTY+C + RT + L E KKPH
Sbjct: 559 RRRTYNCKIFLEYSRTVATVNDSLCEGKKPH 589
>AE013599-3406|AAF46855.2| 1995|Drosophila melanogaster CG4444-PA
protein.
Length = 1995
Score = 25.8 bits (54), Expect = 8.6
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +1
Query: 112 SGEPERESGLTSRETGNPQSSRRKTRTYSCWTRTDSLRTCELITSYLEEKKKPHY 276
S +PE E R+ P + R Y+C T T S + L+ +++P+Y
Sbjct: 524 SHKPESERSYLLRKRSTPAAERTTFVCYTCGTDTPSSQ-LRLVYCCPNAEREPYY 577
>AB032181-1|BAA86717.1| 1990|Drosophila melanogaster plexus protein.
Length = 1990
Score = 25.8 bits (54), Expect = 8.6
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +1
Query: 112 SGEPERESGLTSRETGNPQSSRRKTRTYSCWTRTDSLRTCELITSYLEEKKKPHY 276
S +PE E R+ P + R Y+C T T S + L+ +++P+Y
Sbjct: 524 SHKPESERSYLLRKRSTPAAERTTFVCYTCGTDTPSSQ-LRLVYCCPNAEREPYY 577
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,397,230
Number of Sequences: 53049
Number of extensions: 206173
Number of successful extensions: 694
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 692
length of database: 24,988,368
effective HSP length: 72
effective length of database: 21,168,840
effective search space used: 465714480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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