Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_A10
         (284 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   2.2  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   3.9  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   3.9  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   3.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   3.9  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   3.9  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    19   9.0  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    19   9.0  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    19   9.0  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    19   9.0  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    19   9.0  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 2.2
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -3

Query: 210 PCPTRVCSGFPSRTLWVSCLS 148
           P P RV   FPS   W   +S
Sbjct: 226 PLPVRVLPNFPSSGHWQDQMS 246


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 3.9
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +3

Query: 105 VGEWGAGEGEWTDEQRDRKPTEFEKENPNI 194
           VG +G     W +E++     +F  E P++
Sbjct: 165 VGVFGGSAWSWREERQAYYLHQFAPEQPDL 194


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 3.9
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 135 WTDEQRDRKPTEFEKEN 185
           WTD     KP++F+  N
Sbjct: 99  WTDSHLSWKPSDFDGIN 115


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.6 bits (41), Expect = 3.9
 Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
 Frame = +3

Query: 87   DVIGEKVGEWGAGEGEW--TDEQRD 155
            + +G+   EW  G+GE   TD  R+
Sbjct: 1336 NAVGDPTREWYKGQGEQIRTDSTRN 1360


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.6 bits (41), Expect = 3.9
 Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
 Frame = +3

Query: 87   DVIGEKVGEWGAGEGEW--TDEQRD 155
            + +G+   EW  G+GE   TD  R+
Sbjct: 1332 NAVGDPTREWYKGQGEQIRTDSTRN 1356


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 3.9
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +3

Query: 105 VGEWGAGEGEWTDEQRDRKPTEFEKENPNI 194
           VG +G     W +E++     +F  E P++
Sbjct: 165 VGVFGGSAWSWREERQAYYLHQFAPEQPDL 194


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 6/13 (46%), Positives = 6/13 (46%)
 Frame = -3

Query: 279 NIMWFFFLFQITC 241
           NI W    F I C
Sbjct: 4   NIWWLILYFSIVC 16


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 232 HMFSNCPSLSNKSMFGFS 179
           H    CP+ S  S +GF+
Sbjct: 277 HSCEACPAHSKSSDYGFT 294


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 9/26 (34%), Positives = 11/26 (42%)
 Frame = +3

Query: 105 VGEWGAGEGEWTDEQRDRKPTEFEKE 182
           V EW      W  E + R  T  E+E
Sbjct: 571 VAEWEPPRALWPTEWKVRPSTVEERE 596


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +1

Query: 169 SSRRKTRTYSCWTRTDSLRTCELITSYLEEKKK 267
           S RRK     CW+   +  + E I+    ++K+
Sbjct: 205 SDRRKGSIARCWSLDSTAASDEDISLTTHQQKR 237


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -3

Query: 234 FTCSQTVRPC 205
           F CS+T  PC
Sbjct: 98  FECSKTSNPC 107


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,045
Number of Sequences: 438
Number of extensions: 1376
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5619645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)