Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_A09
         (386 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1111|AAF54504.3|  395|Drosophila melanogaster CG12814-P...    28   4.9  
AE014297-1110|ABI31157.1|  408|Drosophila melanogaster CG12814-P...    28   4.9  
D84317-1|BAA21710.1|  197|Drosophila melanogaster rab-related pr...    27   8.5  
AY075329-1|AAL68196.1|  197|Drosophila melanogaster GH11193p pro...    27   8.5  
AE014298-769|AAF46057.1|  197|Drosophila melanogaster CG3129-PA ...    27   8.5  
AE013599-1353|AAF58611.2| 5303|Drosophila melanogaster CG13185-P...    27   8.5  

>AE014297-1111|AAF54504.3|  395|Drosophila melanogaster CG12814-PA,
           isoform A protein.
          Length = 395

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 245 TYNLELSTCLYYHKKHKTQKRSD 177
           TY L +  C  + KK++TQK +D
Sbjct: 173 TYGLRVGNCFAFDKKNRTQKLTD 195


>AE014297-1110|ABI31157.1|  408|Drosophila melanogaster CG12814-PB,
           isoform B protein.
          Length = 408

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 245 TYNLELSTCLYYHKKHKTQKRSD 177
           TY L +  C  + KK++TQK +D
Sbjct: 186 TYGLRVGNCFAFDKKNRTQKLTD 208


>D84317-1|BAA21710.1|  197|Drosophila melanogaster rab-related
           protein 4 protein.
          Length = 197

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 11/36 (30%), Positives = 24/36 (66%)
 Frame = -3

Query: 114 KLSQKHKGIFVLTTARCTLYIVLIVKGNLIFNIFSS 7
           K ++KH+ +F+ T+A+C  ++  + K +++  I SS
Sbjct: 134 KFARKHRALFIETSAKCDQFVSDVFK-DVVEKIVSS 168


>AY075329-1|AAL68196.1|  197|Drosophila melanogaster GH11193p
           protein.
          Length = 197

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 11/36 (30%), Positives = 24/36 (66%)
 Frame = -3

Query: 114 KLSQKHKGIFVLTTARCTLYIVLIVKGNLIFNIFSS 7
           K ++KH+ +F+ T+A+C  ++  + K +++  I SS
Sbjct: 134 KFARKHRALFIETSAKCDQFVSDVFK-DVVEKIVSS 168


>AE014298-769|AAF46057.1|  197|Drosophila melanogaster CG3129-PA
           protein.
          Length = 197

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 11/36 (30%), Positives = 24/36 (66%)
 Frame = -3

Query: 114 KLSQKHKGIFVLTTARCTLYIVLIVKGNLIFNIFSS 7
           K ++KH+ +F+ T+A+C  ++  + K +++  I SS
Sbjct: 134 KFARKHRALFIETSAKCDQFVSDVFK-DVVEKIVSS 168


>AE013599-1353|AAF58611.2| 5303|Drosophila melanogaster CG13185-PA
            protein.
          Length = 5303

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 20/58 (34%), Positives = 27/58 (46%)
 Frame = -1

Query: 326  FFPRFVWGTLLYDLLILKGIIVADQFLTYNLELSTCLYYHKKHKTQKRSDARNTVIDL 153
            F  R + GTL  D       + ADQ LT N  L  CL   K  ++  R++  N  I+L
Sbjct: 2832 FMERLLTGTLRDDFDEQVNPLYADQLLTLNSNLWHCL---KTLESANRTEITNAWIEL 2886


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,221,840
Number of Sequences: 53049
Number of extensions: 294879
Number of successful extensions: 529
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 529
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1066083345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)