Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_A06
         (248 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC110511-1|AAI10512.1|  160|Homo sapiens C10orf76 protein protein.     28   4.8  
AL391827-3|CAI16232.1|  689|Homo sapiens novel protein protein.        28   4.8  
AK023176-1|BAB14447.1|  265|Homo sapiens protein ( Homo sapiens ...    28   4.8  
Z24459-1|CAA80828.1|  107|Homo sapiens p13MTCP1 protein protein.       28   6.3  
BX470111-7|CAI41656.1|  107|Homo sapiens mature T-cell prolifera...    28   6.3  

>BC110511-1|AAI10512.1|  160|Homo sapiens C10orf76 protein protein.
          Length = 160

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +3

Query: 168 CYQKRMEIRIHMTYKRMCSKL 230
           CYQK+  +R+H T++ + S L
Sbjct: 56  CYQKKCRVRLHYTWRELWSAL 76


>AL391827-3|CAI16232.1|  689|Homo sapiens novel protein protein.
          Length = 689

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +3

Query: 168 CYQKRMEIRIHMTYKRMCSKL 230
           CYQK+  +R+H T++ + S L
Sbjct: 480 CYQKKCRVRLHYTWRELWSAL 500


>AK023176-1|BAB14447.1|  265|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13114 fis, clone NT2RP3002603. ).
          Length = 265

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +3

Query: 168 CYQKRMEIRIHMTYKRMCSKL 230
           CYQK+  +R+H T++ + S L
Sbjct: 56  CYQKKCRVRLHYTWRELWSAL 76


>Z24459-1|CAA80828.1|  107|Homo sapiens p13MTCP1 protein protein.
          Length = 107

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/54 (24%), Positives = 26/54 (48%)
 Frame = +3

Query: 6   RIIISIVAIELCIYLLHIFALTSSLRDDTKESHYILNTLSKCYLLWPKEHYLEN 167
           R  +++V  E       +  +   L D  + SH + + L   + L+P+E Y++N
Sbjct: 27  RTWVAVVEEETSFLRARVQQIQVPLGDAARPSHLLTSQLPLMWQLYPEERYMDN 80


>BX470111-7|CAI41656.1|  107|Homo sapiens mature T-cell
           proliferation 1 protein.
          Length = 107

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/54 (24%), Positives = 26/54 (48%)
 Frame = +3

Query: 6   RIIISIVAIELCIYLLHIFALTSSLRDDTKESHYILNTLSKCYLLWPKEHYLEN 167
           R  +++V  E       +  +   L D  + SH + + L   + L+P+E Y++N
Sbjct: 27  RTWVAVVEEETSFLRARVQQIQVPLGDAARPSHLLTSQLPLMWQLYPEERYMDN 80


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,129,105
Number of Sequences: 237096
Number of extensions: 614223
Number of successful extensions: 1256
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1256
length of database: 76,859,062
effective HSP length: 60
effective length of database: 62,633,302
effective search space used: 1377932644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)