Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_A06
         (248 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069483-1|AAL39628.1|  706|Drosophila melanogaster LD21733p pro...    26   8.0  
AY069349-1|AAL39494.1|  391|Drosophila melanogaster LD05671p pro...    26   8.0  
AE014297-882|AAF54339.1|  417|Drosophila melanogaster CG11997-PA...    26   8.0  
AE014297-831|AAF54299.2|  706|Drosophila melanogaster CG8379-PA,...    26   8.0  
AE014297-830|AAS65128.1|  707|Drosophila melanogaster CG8379-PB,...    26   8.0  
AE014296-2267|AAF49825.1|  391|Drosophila melanogaster CG10191-P...    26   8.0  

>AY069483-1|AAL39628.1|  706|Drosophila melanogaster LD21733p
           protein.
          Length = 706

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 99  SHYILNTLSKCYLLWPKEHYLENCYQKRMEIRIHMTYKRMCSKL 230
           SH +     + YLL     +   CYQKR  +R++  +K + S L
Sbjct: 444 SHLMKKFPMELYLLCIGVIHRILCYQKRCRVRLNYPWKELWSAL 487


>AY069349-1|AAL39494.1|  391|Drosophila melanogaster LD05671p
           protein.
          Length = 391

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = -3

Query: 162 PSNVLWAKVNNILIAYLECNEIPSYRLAVN*LKQIYATNKCKV 34
           P  + W    N+L   L CN I  + ++ + L Q+Y  +   V
Sbjct: 189 PRQLAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPV 231


>AE014297-882|AAF54339.1|  417|Drosophila melanogaster CG11997-PA
           protein.
          Length = 417

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -3

Query: 171 NNFPSNVLWAKVNNILIAYLECNEIP 94
           ++FP   +WA    +L++Y  C  IP
Sbjct: 11  SSFPRIAIWATCGLLLLSYQGCQAIP 36


>AE014297-831|AAF54299.2|  706|Drosophila melanogaster CG8379-PA,
           isoform A protein.
          Length = 706

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 99  SHYILNTLSKCYLLWPKEHYLENCYQKRMEIRIHMTYKRMCSKL 230
           SH +     + YLL     +   CYQKR  +R++  +K + S L
Sbjct: 444 SHLMKKFPMELYLLCIGVIHRILCYQKRCRVRLNYPWKELWSAL 487


>AE014297-830|AAS65128.1|  707|Drosophila melanogaster CG8379-PB,
           isoform B protein.
          Length = 707

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 99  SHYILNTLSKCYLLWPKEHYLENCYQKRMEIRIHMTYKRMCSKL 230
           SH +     + YLL     +   CYQKR  +R++  +K + S L
Sbjct: 445 SHLMKKFPMELYLLCIGVIHRILCYQKRCRVRLNYPWKELWSAL 488


>AE014296-2267|AAF49825.1|  391|Drosophila melanogaster CG10191-PA
           protein.
          Length = 391

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = -3

Query: 162 PSNVLWAKVNNILIAYLECNEIPSYRLAVN*LKQIYATNKCKV 34
           P  + W    N+L   L CN I  + ++ + L Q+Y  +   V
Sbjct: 189 PRQLAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPV 231


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,798,504
Number of Sequences: 53049
Number of extensions: 190335
Number of successful extensions: 510
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 24,988,368
effective HSP length: 62
effective length of database: 21,699,330
effective search space used: 433986600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)