Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_A06
(248 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 23 0.43
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 23 0.76
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 22 1.3
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 22 1.3
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 20 4.0
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 20 4.0
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 20 4.0
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 20 5.3
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 20 5.3
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 19 7.1
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 19 9.3
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 19 9.3
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 19 9.3
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 19 9.3
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 19 9.3
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 19 9.3
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 19 9.3
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 19 9.3
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 19 9.3
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 19 9.3
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 23.4 bits (48), Expect = 0.43
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 90 TKESHYILNTLSKCYLLWPK 149
T ESH L+T CY WP+
Sbjct: 129 TNESHACLSTGGSCY--WPR 146
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 22.6 bits (46), Expect = 0.76
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -1
Query: 227 FRTHPFIRHVNSNFHT 180
F++ +IRH+ S +HT
Sbjct: 316 FQSTQYIRHIKSPYHT 331
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 21.8 bits (44), Expect = 1.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 15 ISIVAIELCIYLLHIFALTS 74
I I+ C Y L+IF LTS
Sbjct: 151 IGNTTIQACPYTLNIFDLTS 170
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 21.8 bits (44), Expect = 1.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 121 YQNVIYFGPKNITWKIVTRNVWKFE 195
Y V+Y KN +W+I T N + F+
Sbjct: 197 YALVVYSWAKNDSWRI-THNFFYFD 220
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 20.2 bits (40), Expect = 4.0
Identities = 11/33 (33%), Positives = 12/33 (36%)
Frame = +3
Query: 36 LCIYLLHIFALTSSLRDDTKESHYILNTLSKCY 134
LC Y H FAL D + KCY
Sbjct: 736 LCRYEAHCFALCHCCDFDACDCEMTCPAGCKCY 768
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 20.2 bits (40), Expect = 4.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 215 PFIRHVNSNFHTFLVTIFQVMFFGP 141
PF + +SNF + +VT + F P
Sbjct: 455 PFFANADSNFVSDVVTKLRYEVFQP 479
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 20.2 bits (40), Expect = 4.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 215 PFIRHVNSNFHTFLVTIFQVMFFGP 141
PF + +SNF + +VT + F P
Sbjct: 423 PFFANADSNFVSDVVTKLRYEVFQP 447
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 19.8 bits (39), Expect = 5.3
Identities = 6/23 (26%), Positives = 13/23 (56%)
Frame = -3
Query: 192 EFPYVSGNNFPSNVLWAKVNNIL 124
E P+ + PS++ + K+N +
Sbjct: 565 ESPFTTSTIMPSDIFYDKLNKAI 587
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 19.8 bits (39), Expect = 5.3
Identities = 6/23 (26%), Positives = 13/23 (56%)
Frame = -3
Query: 192 EFPYVSGNNFPSNVLWAKVNNIL 124
E P+ + PS++ + K+N +
Sbjct: 565 ESPFTTSTIMPSDIFYDKLNKAI 587
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 19.4 bits (38), Expect = 7.1
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -3
Query: 219 TSVYTSCEFEFPYVSGNNFPSNVLWAKVNNI 127
+S+ SC + Y + NN+ L+ +N I
Sbjct: 305 SSLSNSCNYSNNYYNNNNYKK--LYYNINYI 333
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 19.0 bits (37), Expect = 9.3
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -1
Query: 92 RIVSQ*TS*SKYMQQINAKFYSYNRNN 12
+I+S ++ KY N +YN NN
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNNYNNNN 106
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 19.0 bits (37), Expect = 9.3
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -1
Query: 92 RIVSQ*TS*SKYMQQINAKFYSYNRNN 12
+I+S ++ KY N +YN NN
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNNYNNNN 106
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 19.0 bits (37), Expect = 9.3
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -1
Query: 92 RIVSQ*TS*SKYMQQINAKFYSYNRNN 12
+I+S ++ KY N +YN NN
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNNYNNNN 106
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 19.0 bits (37), Expect = 9.3
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -1
Query: 92 RIVSQ*TS*SKYMQQINAKFYSYNRNN 12
+I+S ++ KY N +YN NN
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNNYNNNN 106
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 19.0 bits (37), Expect = 9.3
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -1
Query: 44 NAKFYSYNRNNN 9
N Y YN NNN
Sbjct: 92 NNNNYKYNYNNN 103
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 19.0 bits (37), Expect = 9.3
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -1
Query: 44 NAKFYSYNRNNN 9
N Y YN NNN
Sbjct: 92 NNNNYKYNYNNN 103
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 19.0 bits (37), Expect = 9.3
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -1
Query: 44 NAKFYSYNRNNN 9
N Y YN NNN
Sbjct: 92 NNNNYKYNYNNN 103
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 19.0 bits (37), Expect = 9.3
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -1
Query: 44 NAKFYSYNRNNN 9
N Y YN NNN
Sbjct: 92 NNNNYKYNYNNN 103
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 19.0 bits (37), Expect = 9.3
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -1
Query: 44 NAKFYSYNRNNN 9
N Y YN NNN
Sbjct: 92 NNNNYKYNYNNN 103
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 19.0 bits (37), Expect = 9.3
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -1
Query: 44 NAKFYSYNRNNN 9
N Y YN NNN
Sbjct: 325 NNNNYKYNYNNN 336
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,299
Number of Sequences: 438
Number of extensions: 1600
Number of successful extensions: 20
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used: 4401495
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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