Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_A04
(366 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical... 73 8e-14
AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical ... 72 1e-13
U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical pr... 67 3e-12
U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical pr... 66 5e-12
AF106575-6|AAC78175.2| 244|Caenorhabditis elegans Hypothetical ... 62 9e-11
Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical pr... 59 8e-10
Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical pr... 54 3e-08
Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical pr... 29 0.77
Z78536-2|CAB01716.1| 363|Caenorhabditis elegans Hypothetical pr... 28 1.8
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 28 1.8
U28730-2|AAA68262.1| 1009|Caenorhabditis elegans Hypothetical pr... 27 5.4
AL132949-17|CAB70108.2| 338|Caenorhabditis elegans Hypothetical... 27 5.4
AL032644-1|CAA21666.2| 604|Caenorhabditis elegans Hypothetical ... 27 5.4
Z68009-1|CAA92003.1| 1095|Caenorhabditis elegans Hypothetical pr... 26 7.2
U55372-1|AAA98002.2| 816|Caenorhabditis elegans Hypothetical pr... 26 9.5
AF016673-4|AAB66125.2| 743|Caenorhabditis elegans Hypothetical ... 26 9.5
>AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical
protein F32B5.1 protein.
Length = 427
Score = 72.5 bits (170), Expect = 8e-14
Identities = 37/64 (57%), Positives = 47/64 (73%), Gaps = 3/64 (4%)
Frame = +1
Query: 43 KAAAMVDAVTIEKLEAGFSKLQGSES---KSLLKKYLTKEVFEALKNKKTSFGSTLLDCI 213
+A + VDA TI+K+E ++KL G E KSLLKK+LTKEV E LK K+T G+TL DCI
Sbjct: 64 QAKSEVDAATIKKIEEAYAKLNGPEGAKCKSLLKKHLTKEVVEKLKTKRTKVGATLYDCI 123
Query: 214 QSGV 225
+SGV
Sbjct: 124 RSGV 127
>AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical
protein W10C8.5 protein.
Length = 399
Score = 71.7 bits (168), Expect = 1e-13
Identities = 36/64 (56%), Positives = 47/64 (73%), Gaps = 3/64 (4%)
Frame = +1
Query: 43 KAAAMVDAVTIEKLEAGFSKLQGSES---KSLLKKYLTKEVFEALKNKKTSFGSTLLDCI 213
+A + VDA TI+K+E ++KL G E KSLLKK+LTK+V E LK K+T G+TL DCI
Sbjct: 36 QAKSEVDAATIKKIEEAYAKLNGPEGAKCKSLLKKHLTKDVVEKLKTKRTKLGATLYDCI 95
Query: 214 QSGV 225
+SGV
Sbjct: 96 RSGV 99
>U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical
protein F46H5.3a protein.
Length = 396
Score = 67.3 bits (157), Expect = 3e-12
Identities = 37/68 (54%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Frame = +1
Query: 28 CSSARKAAAMVDAVTIEKLEAGFSKLQGS-ESKSLLKKYLTKEVFEALKNKKTSFGSTLL 204
C A++ ++ V I K+E G++KLQ + E SLLKKYLTKEV + LK+KKT G+ LL
Sbjct: 31 CVQAQEGMSVSPDV-IAKIEEGYAKLQAAPECHSLLKKYLTKEVVDQLKDKKTKLGANLL 89
Query: 205 DCIQSGVA 228
D IQSGVA
Sbjct: 90 DVIQSGVA 97
>U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical
protein F46H5.3b protein.
Length = 359
Score = 66.5 bits (155), Expect = 5e-12
Identities = 34/53 (64%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = +1
Query: 73 IEKLEAGFSKLQGS-ESKSLLKKYLTKEVFEALKNKKTSFGSTLLDCIQSGVA 228
I K+E G++KLQ + E SLLKKYLTKEV + LK+KKT G+ LLD IQSGVA
Sbjct: 8 IAKIEEGYAKLQAAPECHSLLKKYLTKEVVDQLKDKKTKLGANLLDVIQSGVA 60
>AF106575-6|AAC78175.2| 244|Caenorhabditis elegans Hypothetical
protein K04F1.1 protein.
Length = 244
Score = 62.5 bits (145), Expect = 9e-11
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Frame = +1
Query: 43 KAAAMVDAVTIEKLEAGFSKLQGSES---KSLLKKYLTKEVFEALKNKKTSFGSTLLDCI 213
+A + VDA TI+K+E + KL G E KSLL+KYLTK++ E LK K T G+++ DCI
Sbjct: 86 QAKSEVDAATIKKIEEAYVKLNGPEGAKCKSLLRKYLTKDIVEKLKTKCTKLGASVYDCI 145
Query: 214 QSGV 225
+G+
Sbjct: 146 LTGL 149
>Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical
protein F44G3.2 protein.
Length = 372
Score = 59.3 bits (137), Expect = 8e-10
Identities = 31/59 (52%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Frame = +1
Query: 58 VDAVTIEKLEAGFSKLQGSES---KSLLKKYLTKEVFEALKNKKTSFGSTLLDCIQSGV 225
VD VTI+K+E + L G + SLLKK LTK+V E LK K T G+ L DCI+SGV
Sbjct: 14 VDPVTIKKIEEAYVMLNGPDGAKCSSLLKKNLTKDVIEKLKTKSTKLGANLYDCIRSGV 72
>Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical
protein ZC434.8 protein.
Length = 360
Score = 54.0 bits (124), Expect = 3e-08
Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = +1
Query: 76 EKLEAGFSKLQG-SESKSLLKKYLTKEVFEALKNKKTSFGSTLLDCIQSG 222
+ +E ++KLQG S+ SLLKK+LTK+V K+KKT G+TLLD IQSG
Sbjct: 9 KSIEEVYTKLQGASDCSSLLKKHLTKDVVAKNKSKKTRLGATLLDVIQSG 58
>Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical
protein C27H6.2 protein.
Length = 458
Score = 29.5 bits (63), Expect = 0.77
Identities = 16/76 (21%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +1
Query: 40 RKAAAMVDAVTIEKLEAGFSKLQGSES--KSLLKKYLTKEVFEALKNKKTSFGSTLLDCI 213
RK+ +V V++ L+ ++ QG + +++ + +T + E ++ + + I
Sbjct: 247 RKSKDIVQNVSLHDLDIANARPQGRQGDVSNIVSQLMTPKKTEVTDRLRSEINKVVNEYI 306
Query: 214 QSGVAEALRNIPALDQ 261
+SGVAE + + +D+
Sbjct: 307 ESGVAELMPGVLFIDE 322
>Z78536-2|CAB01716.1| 363|Caenorhabditis elegans Hypothetical
protein C07A4.3 protein.
Length = 363
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = -2
Query: 311 SMSY*PPAVHGRCYDFR*SSAGMFRKASATPDWMQSSRVEPNEVFLFLRASKTSLVRYFF 132
SMS+ P V + F + +F+ + W+ S P + F +++ + R+
Sbjct: 67 SMSHSPGKVQKAVFLFAQPAEHIFQNCFGSL-WVDRSNKTPRQTFFRCSPTRSQVSRFLL 125
Query: 131 NSDFDSEPWSL 99
N FD P+S+
Sbjct: 126 NIIFDFVPFSI 136
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -2
Query: 173 FLRASKT-SLVRYFFNSDFDSEPWSLLKPASNFSMVTASTIAAAFLALEQPSES 15
FL S T +L++ FN +D + +KP+ + +MVT + L+++Q E+
Sbjct: 22 FLETSNTETLLQQLFNQTYDVD----MKPSDDLTMVTITPNTFILLSMDQTQET 71
>U28730-2|AAA68262.1| 1009|Caenorhabditis elegans Hypothetical
protein K10B2.5 protein.
Length = 1009
Score = 26.6 bits (56), Expect = 5.4
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = +2
Query: 26 VVQVPEKPQQ-WWTP*PSRNWRL 91
V + P+KP WW+P WRL
Sbjct: 49 VKETPQKPDMSWWSPSRGDTWRL 71
>AL132949-17|CAB70108.2| 338|Caenorhabditis elegans Hypothetical
protein Y53F4B.19 protein.
Length = 338
Score = 26.6 bits (56), Expect = 5.4
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +1
Query: 64 AVTIEKLEAGFSKLQGSESKSLLKKYLTKEVFEALKNKKTSFGSTLLDCIQSGVAEALRN 243
AV +E+ F +Q ++ +L K ++FE K KK + G LD + +RN
Sbjct: 269 AVLLERRGDAFKGVQNLYAEEVLAKRTGDKMFEKYKKKKGTKGYQSLDAKLYRPVKVVRN 328
>AL032644-1|CAA21666.2| 604|Caenorhabditis elegans Hypothetical
protein Y51H1A.2 protein.
Length = 604
Score = 26.6 bits (56), Expect = 5.4
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +1
Query: 16 DSDGCSSARKAAAMVDAVTIEKLEAGFSKLQGSESKSLLKKYLTKEVF--EALKNKKTSF 189
D CSS +M+D+ + A L+GS S S+ + +++ ++ T
Sbjct: 273 DHSDCSSVYSHPSMLDSGEMSYQHAVLGGLKGSSSSSMRRVASNQKIQLPQSPLFSSTPV 332
Query: 190 GSTLLDCIQSGVAEA 234
ST+LD ++ G A +
Sbjct: 333 DSTILDQVKIGKANS 347
>Z68009-1|CAA92003.1| 1095|Caenorhabditis elegans Hypothetical protein
R09A8.1 protein.
Length = 1095
Score = 26.2 bits (55), Expect = 7.2
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -2
Query: 170 LRASKTSLVRYFFNSDFDSEPWSLLKPASNFSMVTASTIAAAFL 39
++ + S++ SD +++P LL PASN S +TA++ A L
Sbjct: 944 MKNGQFSVIDRLLPSDSNTKP--LLAPASNNSWITANSRATGIL 985
>U55372-1|AAA98002.2| 816|Caenorhabditis elegans Hypothetical
protein C02G6.2 protein.
Length = 816
Score = 25.8 bits (54), Expect = 9.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 109 GSESKSLLKKYLTKEVFEALKNKK 180
G ES +L+ YL F+A++NKK
Sbjct: 222 GKESLDVLESYLRTLEFDAIQNKK 245
>AF016673-4|AAB66125.2| 743|Caenorhabditis elegans Hypothetical
protein T06D4.3 protein.
Length = 743
Score = 25.8 bits (54), Expect = 9.5
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 275 CYDFR*SSAGMFRKASATPDWMQSSRVEPNEVFLFLRASKTS 150
C +F S+ G FR+ S + +S P + FLR ++TS
Sbjct: 110 CENFEKSACGKFRENSLNSNVHRSKIFIPRMIKKFLRKNETS 151
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,031,415
Number of Sequences: 27780
Number of extensions: 144089
Number of successful extensions: 459
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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