Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_A04
         (366 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    89   2e-20
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    68   4e-14
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   1.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   3.4  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   6.0  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    20   8.0  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    20   8.0  

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 89.0 bits (211), Expect = 2e-20
 Identities = 41/57 (71%), Positives = 48/57 (84%)
 Frame = +1

Query: 55  MVDAVTIEKLEAGFSKLQGSESKSLLKKYLTKEVFEALKNKKTSFGSTLLDCIQSGV 225
           MVD   ++KLE GFSKL  S+SKSLLKKYL+K+VF+ LK KKTSF STLLDCIQSG+
Sbjct: 1   MVDQAVLDKLETGFSKLSSSDSKSLLKKYLSKDVFDQLKTKKTSFDSTLLDCIQSGI 57


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 67.7 bits (158), Expect = 4e-14
 Identities = 31/41 (75%), Positives = 36/41 (87%)
 Frame = +1

Query: 103 LQGSESKSLLKKYLTKEVFEALKNKKTSFGSTLLDCIQSGV 225
           L  S+SKSLLKKYL+K+VF+ LK KKTSF STLLDCIQSG+
Sbjct: 1   LSSSDSKSLLKKYLSKDVFDQLKTKKTSFDSTLLDCIQSGI 41


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 96  QQAPRLGIKVAVEEVPNQGGFRSP 167
           ++A  LG+KV ++ VPN      P
Sbjct: 107 RRAKSLGLKVILDFVPNHSSHEHP 130


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 297 SVTHARLARSLFRSP 341
           S TH+ LARSL   P
Sbjct: 700 SSTHSTLARSLMEGP 714


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 14/59 (23%), Positives = 23/59 (38%)
 Frame = -2

Query: 191 PNEVFLFLRASKTSLVRYFFNSDFDSEPWSLLKPASNFSMVTASTIAAAFLALEQPSES 15
           P EV    R ++          +   + W  L+ A    +  AST+   F AL   ++S
Sbjct: 128 PQEVISHYRRTRRDRYTNLGLVNEQGQTWHDLRVALTSELTAASTVLGFFPALNIVADS 186


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = +1

Query: 112 SESKSLLKKYLTKEVFEALK 171
           ++S++ + +YL+ +V  ALK
Sbjct: 433 TDSENTVPRYLSPDVISALK 452


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 8    AQSTLTVVQVPEKPQQWWTP*PSRN 82
            A +T+T  Q P   QQ     PSRN
Sbjct: 1278 APTTITSSQSPGNQQQTIQTQPSRN 1302


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,925
Number of Sequences: 438
Number of extensions: 1713
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)