Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_A03
(377 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118790-1|AAM50650.1| 68|Drosophila melanogaster GH15688p pro... 44 9e-05
AE014296-3570|AAF51742.1| 68|Drosophila melanogaster CG7181-PA... 44 9e-05
AY071503-1|AAL49125.1| 627|Drosophila melanogaster RE55932p pro... 29 1.5
AF007780-1|AAB87384.1| 1518|Drosophila melanogaster CHD3 protein. 29 1.5
AE014296-3147|AAF49162.2| 892|Drosophila melanogaster CG9594-PA... 29 1.5
BT004866-1|AAO45222.1| 1128|Drosophila melanogaster LD43531p pro... 28 3.5
AF129433-1|AAD21090.1| 883|Drosophila melanogaster histone deac... 28 3.5
AE014298-2131|AAN09662.1| 1138|Drosophila melanogaster CG6170-PC... 28 3.5
AE014298-2130|AAN09661.1| 1135|Drosophila melanogaster CG6170-PB... 28 3.5
AE014298-2129|AAF48443.2| 1128|Drosophila melanogaster CG6170-PA... 28 3.5
AE013599-1071|AAF58809.3| 1350|Drosophila melanogaster CG12908-P... 27 6.1
AE013599-1070|AAS64880.1| 1370|Drosophila melanogaster CG12908-P... 27 6.1
BT015248-1|AAT94477.1| 1906|Drosophila melanogaster LP21012p pro... 27 8.0
AY058464-1|AAL13693.1| 819|Drosophila melanogaster GH26553p pro... 27 8.0
AE014296-511|AAF47687.1| 1906|Drosophila melanogaster CG1241-PA ... 27 8.0
>AY118790-1|AAM50650.1| 68|Drosophila melanogaster GH15688p
protein.
Length = 68
Score = 43.6 bits (98), Expect = 9e-05
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +2
Query: 110 LKNVLQQRNMSVIATPARNKISKAEVVVLGSLMVVGWSAVPVWVLVNIKHYR 265
+++ +Q R SV++ P +IS AE V+LG M +P WVL +I+ Y+
Sbjct: 14 MRSAMQSRCQSVVSGPPTQRISTAEKVILGGGMCAASLFIPAWVLYHIRDYK 65
>AE014296-3570|AAF51742.1| 68|Drosophila melanogaster CG7181-PA
protein.
Length = 68
Score = 43.6 bits (98), Expect = 9e-05
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +2
Query: 110 LKNVLQQRNMSVIATPARNKISKAEVVVLGSLMVVGWSAVPVWVLVNIKHYR 265
+++ +Q R SV++ P +IS AE V+LG M +P WVL +I+ Y+
Sbjct: 14 MRSAMQSRCQSVVSGPPTQRISTAEKVILGGGMCAASLFIPAWVLYHIRDYK 65
>AY071503-1|AAL49125.1| 627|Drosophila melanogaster RE55932p
protein.
Length = 627
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +1
Query: 106 DPKECAPTEKHERYRYTR*K*DFKSRSGCVGQFDGGGLVCCPSVGSRQHQTLQRQGIKT 282
D K K +R + K F+ C DGG L+CC S S H+T +K+
Sbjct: 10 DWKTPGKASKDKRPKTNAKKQKFRDEEYCKVCSDGGDLLCCDSCPSVYHRTCLSPPLKS 68
>AF007780-1|AAB87384.1| 1518|Drosophila melanogaster CHD3 protein.
Length = 1518
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +1
Query: 106 DPKECAPTEKHERYRYTR*K*DFKSRSGCVGQFDGGGLVCCPSVGSRQHQTLQRQGIKT 282
D K K +R + K F+ C DGG L+CC S S H+T +K+
Sbjct: 13 DWKTPGKASKDKRPKTNAKKQKFRDEEYCKVCSDGGDLLCCDSCPSVYHRTCLSPPLKS 71
>AE014296-3147|AAF49162.2| 892|Drosophila melanogaster CG9594-PA
protein.
Length = 892
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +1
Query: 106 DPKECAPTEKHERYRYTR*K*DFKSRSGCVGQFDGGGLVCCPSVGSRQHQTLQRQGIKT 282
D K K +R + K F+ C DGG L+CC S S H+T +K+
Sbjct: 10 DWKTPGKASKDKRPKTNAKKQKFRDEEYCKVCSDGGDLLCCDSCPSVYHRTCLSPPLKS 68
>BT004866-1|AAO45222.1| 1128|Drosophila melanogaster LD43531p
protein.
Length = 1128
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2
Query: 220 PAHHHQTAQHNHFCF*NLISSGCSDNAHVSLLEHIL 113
P HH A++N +CF N ++ V L+ IL
Sbjct: 234 PGHHAMKAEYNGYCFFNNVALATQHALDVHKLQRIL 269
>AF129433-1|AAD21090.1| 883|Drosophila melanogaster histone
deacetylase HDA2 protein.
Length = 883
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2
Query: 220 PAHHHQTAQHNHFCF*NLISSGCSDNAHVSLLEHIL 113
P HH A++N +CF N ++ V L+ IL
Sbjct: 159 PGHHAMKAEYNGYCFFNNVALATQHALDVHKLQRIL 194
>AE014298-2131|AAN09662.1| 1138|Drosophila melanogaster CG6170-PC,
isoform C protein.
Length = 1138
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2
Query: 220 PAHHHQTAQHNHFCF*NLISSGCSDNAHVSLLEHIL 113
P HH A++N +CF N ++ V L+ IL
Sbjct: 244 PGHHAMKAEYNGYCFFNNVALATQHALDVHKLQRIL 279
>AE014298-2130|AAN09661.1| 1135|Drosophila melanogaster CG6170-PB,
isoform B protein.
Length = 1135
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2
Query: 220 PAHHHQTAQHNHFCF*NLISSGCSDNAHVSLLEHIL 113
P HH A++N +CF N ++ V L+ IL
Sbjct: 241 PGHHAMKAEYNGYCFFNNVALATQHALDVHKLQRIL 276
>AE014298-2129|AAF48443.2| 1128|Drosophila melanogaster CG6170-PA,
isoform A protein.
Length = 1128
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2
Query: 220 PAHHHQTAQHNHFCF*NLISSGCSDNAHVSLLEHIL 113
P HH A++N +CF N ++ V L+ IL
Sbjct: 234 PGHHAMKAEYNGYCFFNNVALATQHALDVHKLQRIL 269
>AE013599-1071|AAF58809.3| 1350|Drosophila melanogaster CG12908-PA,
isoform A protein.
Length = 1350
Score = 27.5 bits (58), Expect = 6.1
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +1
Query: 88 PQNQPTD-PKECAPTEKHERYRYTR*K*DFKSRSGCVGQFDGGGLVC 225
PQ P P+E P E YR ++ ++ R C FDG G C
Sbjct: 679 PQPNPYPYPEEQIPQHPDECYRCSKDADCYQGRCTCHEGFDGDGYTC 725
>AE013599-1070|AAS64880.1| 1370|Drosophila melanogaster CG12908-PB,
isoform B protein.
Length = 1370
Score = 27.5 bits (58), Expect = 6.1
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +1
Query: 88 PQNQPTD-PKECAPTEKHERYRYTR*K*DFKSRSGCVGQFDGGGLVC 225
PQ P P+E P E YR ++ ++ R C FDG G C
Sbjct: 679 PQPNPYPYPEEQIPQHPDECYRCSKDADCYQGRCTCHEGFDGDGYTC 725
>BT015248-1|AAT94477.1| 1906|Drosophila melanogaster LP21012p protein.
Length = 1906
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +1
Query: 76 CP--EPPQNQPTDPKECAPTEKHERYRYTR 159
CP EP N+ T P E P E+HE +T+
Sbjct: 1175 CPPEEPILNEDTKPAEPKPNEEHEMSDHTQ 1204
>AY058464-1|AAL13693.1| 819|Drosophila melanogaster GH26553p
protein.
Length = 819
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +1
Query: 76 CP--EPPQNQPTDPKECAPTEKHERYRYTR 159
CP EP N+ T P E P E+HE +T+
Sbjct: 88 CPPEEPILNEDTKPAEPKPNEEHEMSDHTQ 117
>AE014296-511|AAF47687.1| 1906|Drosophila melanogaster CG1241-PA
protein.
Length = 1906
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +1
Query: 76 CP--EPPQNQPTDPKECAPTEKHERYRYTR 159
CP EP N+ T P E P E+HE +T+
Sbjct: 1175 CPPEEPILNEDTKPAEPKPNEEHEMSDHTQ 1204
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,819,429
Number of Sequences: 53049
Number of extensions: 393082
Number of successful extensions: 2209
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2205
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1003372560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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