Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_A02
(395 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellu... 228 3e-59
UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellul... 200 8e-51
UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4... 149 1e-35
UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellu... 141 5e-33
UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17; Archa... 134 4e-31
UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1; ... 105 3e-22
UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;... 83 2e-15
UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN full... 77 1e-13
UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4; ce... 75 7e-13
UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondr... 64 7e-10
UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Re... 64 1e-09
UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=... 62 3e-09
UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|... 60 2e-08
UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellul... 58 5e-08
UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2; Bilateria|... 57 1e-07
UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6; Sacchar... 57 1e-07
UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondria... 57 1e-07
UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S riboso... 55 4e-07
UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Ze... 54 8e-07
UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2; D... 54 1e-06
UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2; ... 51 9e-06
UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondria... 50 1e-05
UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12; ... 50 2e-05
UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondria... 46 2e-04
UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n... 46 2e-04
UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1; ... 46 3e-04
UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces cap... 46 4e-04
UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit... 45 5e-04
UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellul... 45 6e-04
UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1; ... 44 8e-04
UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondria... 44 0.001
UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella ve... 44 0.001
UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 - ... 43 0.002
UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12; n=... 43 0.002
UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=... 43 0.002
UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=... 42 0.003
UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1; T... 38 0.053
UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1; B... 38 0.093
UniRef50_Q0QIR5 Cluster: Ribosomal protein S12; n=1; Oltmannsiel... 37 0.16
UniRef50_A7R6Q2 Cluster: Chromosome undetermined scaffold_1375, ... 36 0.38
UniRef50_P15755 Cluster: Mitochondrial ribosomal protein S12; n=... 35 0.50
UniRef50_Q6VEC9 Cluster: Ribosomal protein S12; n=1; Emiliania h... 35 0.66
UniRef50_Q6R9M1 Cluster: Putative uncharacterized protein orf127... 35 0.66
UniRef50_A0Z7N1 Cluster: Putative Mg2+ and Co2+ transporter CorB... 33 1.5
UniRef50_A0CUX9 Cluster: Chromosome undetermined scaffold_29, wh... 33 2.7
UniRef50_Q2GQC4 Cluster: Putative uncharacterized protein; n=2; ... 33 2.7
UniRef50_Q0E5H9 Cluster: Glutamate dehydrogenase; n=1; Halobacil... 32 4.6
UniRef50_A4XF13 Cluster: Transcriptional regulator, LysR family;... 32 4.6
UniRef50_Q66X01 Cluster: NACHT, LRR and PYD domains-containing p... 32 4.6
UniRef50_Q4JSK5 Cluster: Queuine tRNA-ribosyltransferase; n=3; C... 31 6.1
UniRef50_Q4GZ19 Cluster: Putative uncharacterized protein; n=1; ... 31 6.1
UniRef50_Q9ADD0 Cluster: Putative uncharacterized protein SCO533... 31 8.1
UniRef50_Q7R4E5 Cluster: GLP_480_2944_1355; n=1; Giardia lamblia... 31 8.1
UniRef50_Q4N8C8 Cluster: Transcription factor, putative; n=1; Th... 31 8.1
UniRef50_Q2UEE1 Cluster: Predicted protein; n=1; Aspergillus ory... 31 8.1
UniRef50_A5E4V1 Cluster: Putative uncharacterized protein; n=1; ... 31 8.1
>UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellular
organisms|Rep: 40S ribosomal protein S23 - Homo sapiens
(Human)
Length = 143
Score = 228 bits (557), Expect = 3e-59
Identities = 105/121 (86%), Positives = 113/121 (93%)
Frame = +3
Query: 33 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAK 212
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 213 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRF 392
QPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN IEENDEVLVAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 393 K 395
K
Sbjct: 121 K 121
>UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellular
organisms|Rep: 40S ribosomal protein S23 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 145
Score = 200 bits (488), Expect = 8e-51
Identities = 90/120 (75%), Positives = 105/120 (87%)
Frame = +3
Query: 36 GKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQ 215
GKPRG+ +ARK HRR RWA+ +KK +GT +K++PFGG+SHAKGIVLEK+G+E+KQ
Sbjct: 4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQ 63
Query: 216 PNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFK 395
PNSAIRKCVRVQLIKNGKKVTAFVP DGCLN ++ENDEVL+AGFGRKG A GDIPGVRFK
Sbjct: 64 PNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFK 123
>UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4;
Oryza sativa|Rep: Putative 40s ribosomal protein S23 -
Oryza sativa (Rice)
Length = 301
Score = 149 bits (362), Expect = 1e-35
Identities = 71/108 (65%), Positives = 81/108 (75%), Gaps = 1/108 (0%)
Frame = +3
Query: 12 DRVRAIVMG-KPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVL 188
+RVRA G K G+ RK HRR QRWADK +KK+H G WK PF G+SHAKGIVL
Sbjct: 64 ERVRAWSCGAKTCGMGAGRKLKTHRRNQRWADKAYKKSHFGNEWK-KPFAGSSHAKGIVL 122
Query: 189 EKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV 332
EK+G+EAKQPNSAI KC RVQL+KNGKK+ AFVP DGCLN I+EN V
Sbjct: 123 EKIGIEAKQPNSAICKCARVQLVKNGKKIAAFVPNDGCLNFIKENGPV 170
>UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellular
organisms|Rep: 30S ribosomal protein S12P - Uncultured
methanogenic archaeon RC-I
Length = 142
Score = 141 bits (341), Expect = 5e-33
Identities = 66/112 (58%), Positives = 86/112 (76%), Gaps = 1/112 (0%)
Frame = +3
Query: 63 RKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCV 242
RK V+ R+ RW+D+++ + + KA+P GA AKGIVLEKVGVEAKQPNSAIRKC+
Sbjct: 9 RKLVHDRKLYRWSDRDYARRVLRLDEKADPLEGAPQAKGIVLEKVGVEAKQPNSAIRKCI 68
Query: 243 RVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGF-GRKGHAVGDIPGVRFK 395
R+QLIKNG+++TAF P DG +N I+E+DEV + G GR G + GDIPGVRF+
Sbjct: 69 RIQLIKNGRQITAFCPGDGAINFIDEHDEVTIEGIGGRMGGSYGDIPGVRFR 120
>UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17;
Archaea|Rep: 30S ribosomal protein S12P - Pyrobaculum
aerophilum
Length = 147
Score = 134 bits (325), Expect = 4e-31
Identities = 66/119 (55%), Positives = 86/119 (72%), Gaps = 1/119 (0%)
Frame = +3
Query: 42 PRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPN 221
P G+ K R++ RW D +K+ +G K +P GA A+GIVLEKVGVEA++PN
Sbjct: 7 PYGLFAGGKLKRKRQKFRWNDVTYKRKMLGLVEKYDPLEGAPMARGIVLEKVGVEARKPN 66
Query: 222 SAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGF-GRKGHAVGDIPGVRFK 395
+A+RKCVRVQL+KNGK VTAFVP DG LN+I E+DEV++ G +G ++GDIPGVRFK
Sbjct: 67 AAVRKCVRVQLVKNGKVVTAFVPLDGSLNYINEHDEVVIERIGGPEGRSLGDIPGVRFK 125
>UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 102
Score = 105 bits (252), Expect = 3e-22
Identities = 50/75 (66%), Positives = 57/75 (76%)
Frame = -2
Query: 394 LNLTPGMSPTAWPLRPNPATNTSSFSSMWLRQPSRGTNAVTFLPFLMSCTRTHLRMAEFG 215
LNLTPG+SP A PL P PA TSSFSS +QPS GT AVTFLPFL++ T TH +AEFG
Sbjct: 28 LNLTPGISPLALPLLPKPANKTSSFSSTKFKQPSFGTKAVTFLPFLINWTSTHFSIAEFG 87
Query: 214 CLASTPTFSRTMPLA 170
CL S P FS+T+PLA
Sbjct: 88 CLDSIPIFSKTIPLA 102
>UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 143
Score = 83.0 bits (196), Expect = 2e-15
Identities = 47/121 (38%), Positives = 67/121 (55%)
Frame = -1
Query: 395 LKSDSRNVTNSVAFTTESCN*HLIVLLNVVEATITRHECCHFLAVLNELYTNTLTNG*IR 216
LK DSR++T S+ F+T+S N +I+ LN V+A I HE C L VLNEL+ + L +G I
Sbjct: 22 LKEDSRDITYSMTFSTKSSN-WIIIFLNEVQAAIIGHERCDLLPVLNELHPDALPDGRIW 80
Query: 215 LLGFNANFFEDDALSMRCTTEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPRFT 36
L G N FF+ ++L MR + + L VGF V P L+ ++ L + T
Sbjct: 81 LFGLNPYFFQHNSLCMRGAPKRIGLQGCAQVGFLVLFVMPLLVPSVTAELPGSSETTTLA 140
Query: 35 H 33
H
Sbjct: 141 H 141
>UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence; n=8;
Euarchontoglires|Rep: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 154
Score = 77.0 bits (181), Expect = 1e-13
Identities = 45/120 (37%), Positives = 63/120 (52%)
Frame = -1
Query: 362 VAFTTESCN*HLIVLLNVVEATITRHECCHFLAVLNELYTNTLTNG*IRLLGFNANFFED 183
+ F+T+S N + I+ LN V+A I HE C L VLNEL+ + L +G I L G N FF+
Sbjct: 1 MTFSTKSSNQNFIIFLNEVQAAIIGHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQH 60
Query: 182 DALSMRCTTEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPRFTHYDSANTIGPR 3
++L MR T + + L VGF V P L+ ++ L + T H A GPR
Sbjct: 61 NSLCMRGTPKRIGLQGCAQVGFLVLFVMPLLVPSVTAELPGSSETTTLAHL--AGATGPR 118
>UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4;
cellular organisms|Rep: Protein splicing (Intein) site -
Caldivirga maquilingensis IC-167
Length = 661
Score = 74.5 bits (175), Expect = 7e-13
Identities = 36/74 (48%), Positives = 50/74 (67%)
Frame = +3
Query: 42 PRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPN 221
P G+ ARK R++ RW+D ++KK +G K +P GA A+GIVLEKVGVEA++PN
Sbjct: 7 PLGLYAARKLRRKRQKFRWSDIQYKKRALGFIKKYDPLEGAPMARGIVLEKVGVEARKPN 66
Query: 222 SAIRKCVRVQLIKN 263
+A+RKCV + N
Sbjct: 67 AAVRKCVTPDTLIN 80
Score = 72.5 bits (170), Expect = 3e-12
Identities = 36/54 (66%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Frame = +3
Query: 237 CVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGF-GRKGHAVGDIPGVRFK 395
CVRVQL KNGK VTAFVP DG LN I E+DEV++ G +G A GD+PGVRFK
Sbjct: 586 CVRVQLTKNGKVVTAFVPWDGGLNLINEHDEVIIERIGGPEGRAYGDLPGVRFK 639
>UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S12; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to mitochondrial ribosomal protein
S12 - Nasonia vitripennis
Length = 173
Score = 64.5 bits (150), Expect = 7e-10
Identities = 39/87 (44%), Positives = 57/87 (65%)
Frame = +3
Query: 135 RWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHI 314
R NPF GA AKG+VL+ + + K+PNSA RKCV V+L NGK++TA++P G +++
Sbjct: 79 RKSKNPFNGAPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMTAYIP--GIGHNL 135
Query: 315 EENDEVLVAGFGRKGHAVGDIPGVRFK 395
+E++ VL R G D+PGV+ K
Sbjct: 136 QEHNIVLC----RVGRC-RDVPGVKIK 157
>UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Rep:
Em1-tg19B - Euplotes aediculatus
Length = 139
Score = 63.7 bits (148), Expect = 1e-09
Identities = 37/106 (34%), Positives = 67/106 (63%)
Frame = -1
Query: 395 LKSDSRNVTNSVAFTTESCN*HLIVLLNVVEATITRHECCHFLAVLNELYTNTLTNG*IR 216
L+ D+R++++SV+ ++E + + +V+ + T++ +E HFL VL EL+++ L+NG +
Sbjct: 34 LEPDTRHISDSVSLSSEVLDENFVVIFCESKTTVSWNESSHFLVVLFELHSDALSNGCVW 93
Query: 215 LLGFNANFFEDDALSMRCTTEGVRLPSRTHVGFFEFLVGPSLLATM 78
LLGF+ + F DDA +E + L SR H F + PSLL+++
Sbjct: 94 LLGFDCDLFYDDACCAWSNSEWLILGSR-HC-FNVSCIVPSLLSSV 137
>UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=3;
Coelomata|Rep: Mitochondrial ribosomal protein S12 -
Bombyx mori (Silk moth)
Length = 111
Score = 62.5 bits (145), Expect = 3e-09
Identities = 39/91 (42%), Positives = 57/91 (62%)
Frame = +3
Query: 123 HMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 302
H+ R NP G AKG+VL+ V + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 13 HIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRL-SNGKEMVAYIP--GI 69
Query: 303 LNHIEENDEVLVAGFGRKGHAVGDIPGVRFK 395
++++E++ VLV GR + D PGV+ K
Sbjct: 70 GHNLQEHNVVLVR-VGR----LKDCPGVKLK 95
>UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8;
Euteleostomi|Rep: Mrps12-prov protein - Xenopus laevis
(African clawed frog)
Length = 150
Score = 59.7 bits (138), Expect = 2e-08
Identities = 36/82 (43%), Positives = 53/82 (64%)
Frame = +3
Query: 150 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDE 329
P G KG+VL+ + + K+PNSA RKC RV+L NGK+V F+P +G ++++E++
Sbjct: 62 PTFGCPQLKGVVLKTMIRKPKKPNSANRKCARVRL-SNGKEVICFIPGEG--HNLQEHNI 118
Query: 330 VLVAGFGRKGHAVGDIPGVRFK 395
VLV G GR D+PGV+ K
Sbjct: 119 VLVEG-GR----TQDLPGVKLK 135
>UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellular
organisms|Rep: 30S ribosomal protein S12 - Aquifex
aeolicus
Length = 128
Score = 58.4 bits (135), Expect = 5e-08
Identities = 36/85 (42%), Positives = 53/85 (62%)
Frame = +3
Query: 141 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 320
KA G +G+ + V K+PNSA+RK RV+L NG +VTA++P +G ++++E
Sbjct: 20 KAPALQGCPQKRGVCVRVYTVTPKKPNSALRKVARVRL-SNGIEVTAYIPGEG--HNLQE 76
Query: 321 NDEVLVAGFGRKGHAVGDIPGVRFK 395
+ VLV G GR V D+PGVR+K
Sbjct: 77 HSIVLVRG-GR----VKDLPGVRYK 96
>UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2;
Bilateria|Rep: EG:BACH59J11.1 protein - Drosophila
melanogaster (Fruit fly)
Length = 154
Score = 57.2 bits (132), Expect = 1e-07
Identities = 34/91 (37%), Positives = 57/91 (62%)
Frame = +3
Query: 123 HMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 302
H+ TR P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 56 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 112
Query: 303 LNHIEENDEVLVAGFGRKGHAVGDIPGVRFK 395
++++E++ +++ GR + D+PGV+ K
Sbjct: 113 GHNLQEHN-IVLCRVGR----LQDVPGVKLK 138
>UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6;
Saccharomycetales|Rep: 30S ribosomal protein S12 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 183
Score = 57.2 bits (132), Expect = 1e-07
Identities = 31/73 (42%), Positives = 52/73 (71%)
Frame = +3
Query: 174 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 353
+G++L + ++ K+PNSA+RKC RV+L NGK ++A +P +G ++++E+ VLV G GR
Sbjct: 90 RGVILRIMILKPKKPNSALRKCARVRL-SNGKVISALIPGEG--HNLQEHHVVLVRG-GR 145
Query: 354 KGHAVGDIPGVRF 392
V D+PGV++
Sbjct: 146 ----VQDVPGVKY 154
>UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=7; Coelomata|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 140
Score = 57.2 bits (132), Expect = 1e-07
Identities = 34/91 (37%), Positives = 57/91 (62%)
Frame = +3
Query: 123 HMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 302
H+ TR P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 98
Query: 303 LNHIEENDEVLVAGFGRKGHAVGDIPGVRFK 395
++++E++ +++ GR + D+PGV+ K
Sbjct: 99 GHNLQEHN-IVLCRVGR----LQDVPGVKLK 124
>UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S ribosomal
protein S12, mitochondrial precursor (MT-RPS12)
(Technical knockout locus protein); n=2; Coelomata|Rep:
PREDICTED: similar to 40S ribosomal protein S12,
mitochondrial precursor (MT-RPS12) (Technical knockout
locus protein) - Tribolium castaneum
Length = 156
Score = 55.2 bits (127), Expect = 4e-07
Identities = 34/91 (37%), Positives = 55/91 (60%)
Frame = +3
Query: 123 HMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 302
H+ R P G KG+VL+ + + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 60 HIKERKPRRPLDGKPFMKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMVAYIP--GI 116
Query: 303 LNHIEENDEVLVAGFGRKGHAVGDIPGVRFK 395
++++E++ +++ GR V D PGV+ K
Sbjct: 117 GHNLQEHN-IVLCRVGR----VQDCPGVKIK 142
>UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Zea
mays|Rep: Putative 40S ribosomal protein - Zea mays
(Maize)
Length = 309
Score = 54.4 bits (125), Expect = 8e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +3
Query: 324 DEVLVAGFGRKGHAVGDIPGVRFK 395
DEVL+AGFGRKGHAVGDIPGVRFK
Sbjct: 224 DEVLIAGFGRKGHAVGDIPGVRFK 247
>UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2;
Dikarya|Rep: Ribosomal protein S12, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 176
Score = 54.0 bits (124), Expect = 1e-06
Identities = 30/79 (37%), Positives = 48/79 (60%)
Frame = +3
Query: 159 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLV 338
G K + + + ++PNSA+RK RV+L NG+ TA++P +G ++++E+ VLV
Sbjct: 77 GCFQKKAVCAKVYTTKPRKPNSAVRKVARVKL-SNGQMTTAYIPGEG--HNLQEHSVVLV 133
Query: 339 AGFGRKGHAVGDIPGVRFK 395
G G K D+PGVR+K
Sbjct: 134 RGGGAK-----DLPGVRYK 147
>UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 157
Score = 50.8 bits (116), Expect = 9e-06
Identities = 30/66 (45%), Positives = 43/66 (65%)
Frame = +3
Query: 159 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLV 338
G SH KGIVL+ V K+PNS RKC V+L G +V A++P G ++++E+ +VLV
Sbjct: 72 GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYIPNVG--HNLQEHSQVLV 128
Query: 339 AGFGRK 356
G GR+
Sbjct: 129 KG-GRR 133
>UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondrial
precursor; n=13; Deuterostomia|Rep: 28S ribosomal
protein S12, mitochondrial precursor - Homo sapiens
(Human)
Length = 138
Score = 50.4 bits (115), Expect = 1e-05
Identities = 33/83 (39%), Positives = 47/83 (56%)
Frame = +3
Query: 141 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 320
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 321 NDEVLVAGFGRKGHAVGDIPGVR 389
+ VLV G GR D+PGV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVK 122
>UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12;
n=5; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S12 - Chlamydomonas reinhardtii
Length = 133
Score = 49.6 bits (113), Expect = 2e-05
Identities = 33/73 (45%), Positives = 47/73 (64%)
Frame = +3
Query: 174 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 353
+GI L V K+PNSA+RK RV+L G +VTA++P G ++++E+ VLV G GR
Sbjct: 31 RGICLRVYTVTPKKPNSALRKVARVRL-TTGFEVTAYIP--GVGHNLQEHAVVLVRG-GR 86
Query: 354 KGHAVGDIPGVRF 392
V D+PGVR+
Sbjct: 87 ----VKDLPGVRY 95
>UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondrial
precursor; n=18; Dikarya|Rep: 37S ribosomal protein S12,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 153
Score = 46.4 bits (105), Expect = 2e-04
Identities = 30/73 (41%), Positives = 46/73 (63%)
Frame = +3
Query: 174 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 353
KG+VL + ++ K+PNSA RK RV+L NG V+A++P +G + +E+ V V G GR
Sbjct: 59 KGVVLRVMVLKPKKPNSAQRKACRVRL-TNGNVVSAYIPGEG--HDAQEHSIVYVRG-GR 114
Query: 354 KGHAVGDIPGVRF 392
D+PGV++
Sbjct: 115 ----CQDLPGVKY 123
>UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n=3;
Eukaryota|Rep: Apicoplast 30S ribosomal protein S12 -
Toxoplasma gondii
Length = 121
Score = 46.4 bits (105), Expect = 2e-04
Identities = 25/74 (33%), Positives = 50/74 (67%)
Frame = +3
Query: 174 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 353
KG+ ++ K+PNSA+RK +++L KN K++ A++P +G + +++++ VL+ +
Sbjct: 29 KGLCIKVFTRTPKKPNSALRKIAKIKL-KNKKEILAYIPGEG--HALQDHNFVLI----K 81
Query: 354 KGHAVGDIPGVRFK 395
KG V D+PG+++K
Sbjct: 82 KGR-VQDLPGIKYK 94
>UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 128
Score = 46.0 bits (104), Expect = 3e-04
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +3
Query: 324 DEVLVAGFGRKGHAVGDIPGVRFK 395
DEVL++GFG KGHAVGDI GVRF+
Sbjct: 67 DEVLISGFGHKGHAVGDIRGVRFE 90
>UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 208
Score = 45.6 bits (103), Expect = 4e-04
Identities = 29/78 (37%), Positives = 45/78 (57%)
Frame = +3
Query: 159 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLV 338
G KG+ L+ + K+PNS RK R++L NG VT ++P +G ++I+++ VL+
Sbjct: 105 GRPQMKGVCLKTGITKPKKPNSGERKTARIRL-TNGAVVTGYIPGEG--HNIQQHSVVLI 161
Query: 339 AGFGRKGHAVGDIPGVRF 392
G GR D PGVR+
Sbjct: 162 RG-GR----AQDCPGVRY 174
>UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit
S12; n=2; Ascomycota|Rep: Mitochondrial ribosomal
protein subunit S12 - Schizosaccharomyces pombe (Fission
yeast)
Length = 146
Score = 45.2 bits (102), Expect = 5e-04
Identities = 29/78 (37%), Positives = 46/78 (58%)
Frame = +3
Query: 159 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLV 338
G+ +G+ V+ K+PNSA+RK RV+L G+ VTA++P G ++ +E+ VL+
Sbjct: 47 GSPFRRGVCTRVFTVKPKKPNSAVRKVARVRL-STGRSVTAYIP--GIGHNAQEHAVVLL 103
Query: 339 AGFGRKGHAVGDIPGVRF 392
G GR D PGV++
Sbjct: 104 RG-GR----AQDCPGVQY 116
>UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellular
organisms|Rep: 30S ribosomal protein S12 - Rickettsia
conorii
Length = 129
Score = 44.8 bits (101), Expect = 6e-04
Identities = 31/84 (36%), Positives = 48/84 (57%)
Frame = +3
Query: 141 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 320
++NPF G+ L V K+PNSA+RK V+L N + V A++P G + ++E
Sbjct: 25 ESNPF-----KSGVCLVVKTVTPKKPNSALRKIATVRL-SNKRTVNAYIP--GEKHSVKE 76
Query: 321 NDEVLVAGFGRKGHAVGDIPGVRF 392
+D VLV +G V D+PGV++
Sbjct: 77 HDRVLV-----RGGQVPDLPGVKY 95
>UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 141
Score = 44.4 bits (100), Expect = 8e-04
Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +3
Query: 192 KVGV-EAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAV 368
+VG+ + K+PNS RK RV+L GK +TA++P +G ++I+++ VLV G GR
Sbjct: 49 RVGITKPKKPNSGERKTARVRL-STGKVITAYIPGEG--HNIQQHSVVLVRG-GRS---- 100
Query: 369 GDIPGVRF 392
D PGVR+
Sbjct: 101 QDCPGVRY 108
>UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=2; Eukaryota|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Oenothera hookeri
(Hooker's evening primrose)
Length = 188
Score = 44.0 bits (99), Expect = 0.001
Identities = 37/115 (32%), Positives = 58/115 (50%)
Frame = +3
Query: 48 GIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSA 227
G T + + H RE++ H R +A G +G+ L K+PNSA
Sbjct: 63 GFATMNQLIRHGREEK---------HRSDRKRA--LGKCPQKQGVCLRVSTRTPKKPNSA 111
Query: 228 IRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRF 392
+ K +V+L N V A++P +G ++++E+ VLV G GR V D+PGV+F
Sbjct: 112 LGKIAKVRL-SNRNDVFAYIPGEG--HNLQEHSMVLVRG-GR----VKDLPGVKF 158
>UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 110
Score = 43.6 bits (98), Expect = 0.001
Identities = 27/74 (36%), Positives = 45/74 (60%)
Frame = +3
Query: 174 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 353
KG+ ++ + K+PNSA RKC ++L NGK ++A++P G ++E+ V+ G GR
Sbjct: 36 KGVCVKVFIRKPKKPNSAQRKCALLKL-SNGKTISAYIP--GERGQLQEHGVVIFEG-GR 91
Query: 354 KGHAVGDIPGVRFK 395
V D PG+++K
Sbjct: 92 ----VQDCPGIKYK 101
>UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 -
Babesia bovis
Length = 123
Score = 43.2 bits (97), Expect = 0.002
Identities = 26/62 (41%), Positives = 38/62 (61%)
Frame = +3
Query: 210 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 389
K+PNSA+RK ++ L N K V A+VP + + I +N VL+ KG V D+PGV+
Sbjct: 43 KKPNSAVRKVIKTTL--NKKTVLAYVPGENVI--IPKNSRVLI-----KGGNVPDLPGVK 93
Query: 390 FK 395
+K
Sbjct: 94 YK 95
>UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12;
n=1255; cellular organisms|Rep: Mitochondrial ribosomal
protein S12 - Arabidopsis thaliana (Mouse-ear cress)
Length = 125
Score = 43.2 bits (97), Expect = 0.002
Identities = 27/72 (37%), Positives = 44/72 (61%)
Frame = +3
Query: 177 GIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRK 356
G+ L K+PNSA+RK +V+L N + A++P +G ++++E+ VL+ G GR
Sbjct: 32 GVCLRVSTRTPKKPNSALRKIAKVRL-SNRHDIFAYIPGEG--HNLQEHSTVLIRG-GR- 86
Query: 357 GHAVGDIPGVRF 392
V D+PGV+F
Sbjct: 87 ---VKDLPGVKF 95
>UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Chondrus crispus (Carragheen)
Length = 127
Score = 42.7 bits (96), Expect = 0.002
Identities = 28/73 (38%), Positives = 43/73 (58%)
Frame = +3
Query: 174 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 353
KGI ++ K+PNSA RK +V L NGK + ++ +G + ++E+ VLV G GR
Sbjct: 31 KGICMKVYTTSPKKPNSAERKVAKVNL-TNGKSIIGYISGEG--HTLQEHSLVLVRG-GR 86
Query: 354 KGHAVGDIPGVRF 392
V D+PGV++
Sbjct: 87 ----VKDLPGVQY 95
>UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Acanthamoeba castellanii (Amoeba)
Length = 127
Score = 42.3 bits (95), Expect = 0.003
Identities = 27/78 (34%), Positives = 46/78 (58%)
Frame = +3
Query: 159 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLV 338
G KG+ ++ V+ K+PNSA RK +++L + + A++P G ++++E VLV
Sbjct: 26 GCPQKKGVCVKLRIVKPKKPNSAQRKVAKLRL-STRRMIIAYIPGQG--HNLQEYSSVLV 82
Query: 339 AGFGRKGHAVGDIPGVRF 392
+G GR D+PGVR+
Sbjct: 83 SG-GR----APDLPGVRY 95
>UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1;
Theileria parva|Rep: Ribosomal protein S12, putative -
Theileria parva
Length = 124
Score = 38.3 bits (85), Expect = 0.053
Identities = 24/74 (32%), Positives = 40/74 (54%)
Frame = +3
Query: 174 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 353
+G + + + K+PNSA RK ++L KN KK+ A++P G + + + VL+ G
Sbjct: 28 EGFLCSIISMSPKKPNSAKRKVGIIEL-KNNKKIKAYIP--GERSVVRDKTRVLIRGGNT 84
Query: 354 KGHAVGDIPGVRFK 395
+ D+PGV K
Sbjct: 85 R-----DLPGVNHK 93
>UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1;
Babesia bovis|Rep: Ribosomal protein S12, putative -
Babesia bovis
Length = 294
Score = 37.5 bits (83), Expect = 0.093
Identities = 27/79 (34%), Positives = 41/79 (51%)
Frame = +3
Query: 159 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLV 338
G KG+ + V ++PNS +RK RV+L G+ VT VP +G +++ + VLV
Sbjct: 127 GCPQKKGVCVTIRVVTPRKPNSGLRKVARVRL-STGRTVTCHVPGEG--HNLHTHSVVLV 183
Query: 339 AGFGRKGHAVGDIPGVRFK 395
G GR D+ G +K
Sbjct: 184 RG-GR----CQDVSGCHYK 197
>UniRef50_Q0QIR5 Cluster: Ribosomal protein S12; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein S12 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 127
Score = 36.7 bits (81), Expect = 0.16
Identities = 24/62 (38%), Positives = 39/62 (62%)
Frame = +3
Query: 210 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 389
K+PNSA+RK +V+L N V +P +G ++++E+ +L G GR V D+PGV+
Sbjct: 46 KKPNSALRKVAKVRL-SNKTTVIVAIPGEG--HNLKEHAIILFRG-GR----VRDLPGVK 97
Query: 390 FK 395
+K
Sbjct: 98 YK 99
>UniRef50_A7R6Q2 Cluster: Chromosome undetermined scaffold_1375,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1375, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 915
Score = 35.5 bits (78), Expect = 0.38
Identities = 25/61 (40%), Positives = 39/61 (63%)
Frame = +3
Query: 210 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 389
K+ NSA+RK RV+L +G ++T ++P G ++ +E+ VLV G GR V D+P VR
Sbjct: 176 KKSNSALRKVARVRL-TSGFEITTYIP--GIGHNSQEHFVVLVRG-GR----VKDLPNVR 227
Query: 390 F 392
+
Sbjct: 228 Y 228
>UniRef50_P15755 Cluster: Mitochondrial ribosomal protein S12; n=7;
Oligohymenophorea|Rep: Mitochondrial ribosomal protein
S12 - Paramecium tetraurelia
Length = 139
Score = 35.1 bits (77), Expect = 0.50
Identities = 26/72 (36%), Positives = 40/72 (55%)
Frame = +3
Query: 174 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 353
+G VL+ V K+PNSA R + +L N K V A +P G +++ ++ +LV G G
Sbjct: 31 EGSVLKPRIVTPKKPNSARRPVAKAKL-TNKKFVVAHIPGTG--HNLRKHSTILVRGGGC 87
Query: 354 KGHAVGDIPGVR 389
+ D+PGVR
Sbjct: 88 R-----DLPGVR 94
>UniRef50_Q6VEC9 Cluster: Ribosomal protein S12; n=1; Emiliania
huxleyi|Rep: Ribosomal protein S12 - Emiliania huxleyi
Length = 124
Score = 34.7 bits (76), Expect = 0.66
Identities = 20/66 (30%), Positives = 38/66 (57%)
Frame = +3
Query: 174 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 353
K I L+ + + K+PNSA R+ +V+ +K +T +P G ++++++ VL+ G GR
Sbjct: 32 KVICLKVLTISPKKPNSANRRIAKVKTLKQPTFLTVKIP--GEKHNLQQHSTVLICG-GR 88
Query: 354 KGHAVG 371
+G
Sbjct: 89 SKDLIG 94
>UniRef50_Q6R9M1 Cluster: Putative uncharacterized protein orf127;
n=3; Zea mays|Rep: Putative uncharacterized protein
orf127 - Zea mays (Maize)
Length = 127
Score = 34.7 bits (76), Expect = 0.66
Identities = 27/72 (37%), Positives = 40/72 (55%)
Frame = +3
Query: 174 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 353
+G+ L K+PNSA+RK +V+L N + A +P +G ++ +E+ VLV G GR
Sbjct: 63 QGVCLRVSTRTPKKPNSALRKIAKVRL-SNRHDIFAHIPGEG--HNSQEHSIVLVRG-GR 118
Query: 354 KGHAVGDIPGVR 389
V D PG R
Sbjct: 119 ----VKDSPGKR 126
>UniRef50_A0Z7N1 Cluster: Putative Mg2+ and Co2+ transporter CorB;
n=1; marine gamma proteobacterium HTCC2080|Rep: Putative
Mg2+ and Co2+ transporter CorB - marine gamma
proteobacterium HTCC2080
Length = 397
Score = 33.5 bits (73), Expect = 1.5
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
Frame = -1
Query: 242 NTLTNG*IRLLGFNANFFEDDALSMR-----CTTEGVRLPSR 132
N++TNG ++L+GF + D+ALS T G R+PSR
Sbjct: 118 NSVTNGLLKLMGFRPDLQNDEALSQEELRTIVTESGTRIPSR 159
>UniRef50_A0CUX9 Cluster: Chromosome undetermined scaffold_29, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_29,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 107
Score = 32.7 bits (71), Expect = 2.7
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +3
Query: 66 KHVNHRREQ--RWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKC 239
K H+R Q W K+F K + T+ + G H KG+++ K G + N + +
Sbjct: 26 KITKHKRVQGRAWRRKQFNKRKVQTQLQKTLVGQQIHLKGVLVHKKGPNWHKGNKQLLEK 85
Query: 240 VRVQLIK 260
+++L++
Sbjct: 86 EKIELVQ 92
>UniRef50_Q2GQC4 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 507
Score = 32.7 bits (71), Expect = 2.7
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = +3
Query: 108 EFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFV 287
+F+ G W N F A G + E + E K+PN++ + + + + +G TAF
Sbjct: 231 DFRTFKQGLLWGGNVFYFADKFPGQI-ESLVNELKKPNASDQTHIMISIGHSGAMATAFG 289
Query: 288 PRDGCLNHIEENDEV 332
CLN N+ V
Sbjct: 290 APIMCLNQAYYNEPV 304
>UniRef50_Q0E5H9 Cluster: Glutamate dehydrogenase; n=1; Halobacillus
halophilus|Rep: Glutamate dehydrogenase - Sporosarcina
halophila
Length = 458
Score = 31.9 bits (69), Expect = 4.6
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Frame = +3
Query: 84 REQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKN 263
RE W EFK H G ++ N F G S G L + K R + L +N
Sbjct: 161 REMDWMMGEFKNIHPGEPYR-NSFTGKSVVNGGSLGRREATGKGVYFTFRYMMHNFLNEN 219
Query: 264 GKKV--TAFVPRDGCLNHIEENDEVLVAGFGRKG 359
K + T + + LNH ++ + + GFG G
Sbjct: 220 RKWLSDTDNIFANTALNHHDQKLSMAIQGFGNLG 253
>UniRef50_A4XF13 Cluster: Transcriptional regulator, LysR family;
n=1; Novosphingobium aromaticivorans DSM 12444|Rep:
Transcriptional regulator, LysR family - Novosphingobium
aromaticivorans (strain DSM 12444)
Length = 315
Score = 31.9 bits (69), Expect = 4.6
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 63 RKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQ 215
R+H + W EF A G W ANP G A+ A G+V + KQ
Sbjct: 193 RRHAGALQSLGWG-YEFDAALPGGPWSANPAGEAAQAAGLVTFNAWPQLKQ 242
>UniRef50_Q66X01 Cluster: NACHT, LRR and PYD domains-containing
protein 9C; n=19; Murinae|Rep: NACHT, LRR and PYD
domains-containing protein 9C - Mus musculus (Mouse)
Length = 1004
Score = 31.9 bits (69), Expect = 4.6
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = -1
Query: 311 VVEATITRHECCHFLAVLNELYTNTLTNG*IRLLGFNANFFEDDALSMRCTTEGVRLPSR 132
V+E+ + + C F+A LY L+N + LL +NF ED +++ C E ++ P+
Sbjct: 779 VLESLMLSYCCLTFIAC-GHLYEALLSNKHLSLLDLGSNFLEDIGVNLLC--EALKYPNC 835
Query: 131 T 129
T
Sbjct: 836 T 836
>UniRef50_Q4JSK5 Cluster: Queuine tRNA-ribosyltransferase; n=3;
Corynebacterineae|Rep: Queuine tRNA-ribosyltransferase -
Corynebacterium jeikeium (strain K411)
Length = 482
Score = 31.5 bits (68), Expect = 6.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 44 SGYSHGAQARESSSRAAMGRQGIQKSPHG 130
+G G AR + S A+GR G+ K+PHG
Sbjct: 63 AGAGAGGSARLNGSAGALGRTGVIKTPHG 91
>UniRef50_Q4GZ19 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 76
Score = 31.5 bits (68), Expect = 6.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 84 REQRWADKEFKKAHMGTRWKANPFGG 161
RE+R ++ K H G+RW A+ +GG
Sbjct: 48 REKRSGSTQYWKVHTGSRWSASTYGG 73
>UniRef50_Q9ADD0 Cluster: Putative uncharacterized protein SCO5337;
n=1; Streptomyces coelicolor|Rep: Putative
uncharacterized protein SCO5337 - Streptomyces
coelicolor
Length = 243
Score = 31.1 bits (67), Expect = 8.1
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 12 DRVRAIVMGKPRGIRTARKH--VNHRREQRWADKEFKKAHMGTRWKANPFGG 161
+R+RA + K I++ +H V+ + +RW + H G RWKA F G
Sbjct: 4 ERLRAAISAKGETIQSVAEHIGVDPKSVERWITTS-RTPHRGHRWKAASFLG 54
>UniRef50_Q7R4E5 Cluster: GLP_480_2944_1355; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_2944_1355 - Giardia lamblia ATCC
50803
Length = 529
Score = 31.1 bits (67), Expect = 8.1
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -1
Query: 260 LNELYTNTLTNG*IRLLGFNANFFEDDAL-SMRCTTEGVRLPSRTH 126
+ ++T TL G R L + E DAL + ++ GVRLP++TH
Sbjct: 166 MTSVHTQTLNQGLSRALAASGLADESDALITSAVSSSGVRLPTQTH 211
>UniRef50_Q4N8C8 Cluster: Transcription factor, putative; n=1;
Theileria parva|Rep: Transcription factor, putative -
Theileria parva
Length = 140
Score = 31.1 bits (67), Expect = 8.1
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +3
Query: 174 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLN 308
+G++ ++ E ++PN +R C+ +LI + +V+ +GC N
Sbjct: 29 QGVIRKRGNSEGEKPNPKLRACISCRLIMSEDQVSVTFYENGCGN 73
>UniRef50_Q2UEE1 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 425
Score = 31.1 bits (67), Expect = 8.1
Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -2
Query: 391 NLTPGMSPTAWPLRPNPA-TNTSSFSSMWLRQP 296
+LT G PT LRP P+ TN S SS W+R+P
Sbjct: 116 SLTSG--PTPGQLRPGPSRTNDSRTSSEWMREP 146
>UniRef50_A5E4V1 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 515
Score = 31.1 bits (67), Expect = 8.1
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 180 IVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 299
++L KVG + P+ + +CV L + + V +F+P DG
Sbjct: 266 LILNKVGAHLELPS--LHRCVNYDLFRERRGVLSFIPPDG 303
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 440,387,042
Number of Sequences: 1657284
Number of extensions: 9230049
Number of successful extensions: 25533
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 24810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25498
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16503508437
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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