Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_A01
         (289 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   1.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   4.0  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   7.0  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   7.0  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    19   9.2  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 1.7
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 48  ARPSPATQCTAT 13
           A PSPA QC +T
Sbjct: 743 ASPSPAEQCAST 754


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 95  EEAVETIRDQRRGAI 139
           +E +ET  D+R+G+I
Sbjct: 198 DEGIETDSDRRKGSI 212


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.8 bits (39), Expect = 7.0
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -1

Query: 109 LDSLLVLHAEFYERDGDHDGRPAEPGDAVHCDRRLV 2
           L S+L L A   E +G +    + PG     + RL+
Sbjct: 291 LGSVLALEAVTLEDNGIYRCSASNPGGEASAEIRLI 326


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.8 bits (39), Expect = 7.0
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -1

Query: 109 LDSLLVLHAEFYERDGDHDGRPAEPGDAVHCDRRLV 2
           L S+L L A   E +G +    + PG     + RL+
Sbjct: 291 LGSVLALEAVTLEDNGIYRCSASNPGGEASAEIRLI 326


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 5/15 (33%), Positives = 10/15 (66%)
 Frame = -2

Query: 168 FSKYESCLALIAPRR 124
           F+KYE C  +++  +
Sbjct: 117 FAKYEDCSGIVSAHK 131


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,492
Number of Sequences: 438
Number of extensions: 786
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5744526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)