Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_P24
         (541 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8II50 Cluster: Putative uncharacterized protein; n=1; ...    34   2.4  
UniRef50_Q7M3S6 Cluster: Cryptogene protein G5; n=1; Leishmania ...    33   3.2  
UniRef50_Q5CXM2 Cluster: Membrane associated HD superfamily cycl...    33   4.2  

>UniRef50_Q8II50 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1701

 Score = 33.9 bits (74), Expect = 2.4
 Identities = 20/50 (40%), Positives = 24/50 (48%)
 Frame = -2

Query: 510 ISYANNLIAICKNINEDYTKTNQVNKERYKIKLYAKPQKNNFC*Q*YTDC 361
           I Y  N I +C N N D  K N+  KE+Y   +Y   QKN F  Q    C
Sbjct: 788 IGYKENYIHMC-NDNIDSKKKNKKKKEKYISNVYQDDQKNIFINQLKKSC 836


>UniRef50_Q7M3S6 Cluster: Cryptogene protein G5; n=1; Leishmania
           tarentolae|Rep: Cryptogene protein G5 - Leishmania
           tarentolae (Sauroleishmania tarentolae)
          Length = 89

 Score = 33.5 bits (73), Expect = 3.2
 Identities = 13/59 (22%), Positives = 31/59 (52%)
 Frame = +1

Query: 301 LC*LQFYR*PRVINVVHFILAICVLLLTKVIFLWFCV*FYFIPLLIHLVSLRIILIDVF 477
           LC + FY    +I ++ F++ + +  + K+ F+WFC  F     ++  +   ++ + +F
Sbjct: 18  LCFVMFYS---IIGLILFLIVVVLYFMCKLFFVWFCFVFLLFWSIVFNIWFCVLFVFIF 73


>UniRef50_Q5CXM2 Cluster: Membrane associated HD superfamily cyclic
            nucleotide phosphodiesterase domain containing protein;
            n=2; Cryptosporidium|Rep: Membrane associated HD
            superfamily cyclic nucleotide phosphodiesterase domain
            containing protein - Cryptosporidium parvum Iowa II
          Length = 1967

 Score = 33.1 bits (72), Expect = 4.2
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -2

Query: 507  SYANNLIAICKNINEDYTKTNQVNKERYKIKLYAK 403
            +Y+ NL    KNI ++Y     +NK RY+  +Y K
Sbjct: 1340 NYSTNLDQFDKNIKDEYNNYKNINKNRYRNLIYKK 1374


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 412,095,291
Number of Sequences: 1657284
Number of extensions: 6988719
Number of successful extensions: 16468
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16454
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34572633001
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)