Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_P24
         (541 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    30   0.015
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    26   0.24 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    26   0.24 
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    24   0.98 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   1.3  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   9.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 29.9 bits (64), Expect = 0.015
 Identities = 14/55 (25%), Positives = 25/55 (45%)
 Frame = +1

Query: 301 LC*LQFYR*PRVINVVHFILAICVLLLTKVIFLWFCV*FYFIPLLIHLVSLRIIL 465
           LC   FY    +I  VH +  +C+      +F   C+ +++   +I  V L  +L
Sbjct: 111 LCVYYFYY-AFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLL 164



 Score = 24.6 bits (51), Expect = 0.56
 Identities = 16/53 (30%), Positives = 23/53 (43%)
 Frame = +2

Query: 284 YIIIINFVSYNFIDSRVLSMLSILF*QSVYYC*QKLFFCGFAYSFILYRSLFT 442
           Y  II    Y F  + ++  + +LF   +YY    LFF    Y F     +FT
Sbjct: 105 YAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFIIFT 157



 Score = 23.8 bits (49), Expect = 0.98
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +1

Query: 301 LC*LQFYR*PRVINVVHFILAICVLLLTKVIFLWFCV*FYFIPLLIHLVSLRII 462
           LC   FY    ++  VH +L +C+     +  L+ C    FI   +HL+ L  I
Sbjct: 236 LCIYYFYY-AFILFTVHLLLLVCIYYFYYMHLLFCCA---FIIFTMHLLFLLCI 285



 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/38 (21%), Positives = 20/38 (52%)
 Frame = +1

Query: 352 FILAICVLLLTKVIFLWFCV*FYFIPLLIHLVSLRIIL 465
           FI+    LL   V+ +  C+ +++   ++  V L +++
Sbjct: 219 FIIFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLV 256


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 25.8 bits (54), Expect = 0.24
 Identities = 13/50 (26%), Positives = 24/50 (48%)
 Frame = -2

Query: 531 YSQLLALISYANNLIAICKNINEDYTKTNQVNKERYKIKLYAKPQKNNFC 382
           Y  L  ++S   N ++ C N+    +K+NQ+++E    K      K + C
Sbjct: 270 YKPLPIVLSIVKNCLSYCFNLYHLASKSNQLSREAKVTKTVLLGVKIDIC 319


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 25.8 bits (54), Expect = 0.24
 Identities = 13/50 (26%), Positives = 24/50 (48%)
 Frame = -2

Query: 531 YSQLLALISYANNLIAICKNINEDYTKTNQVNKERYKIKLYAKPQKNNFC 382
           Y  L  ++S   N ++ C N+    +K+NQ+++E    K      K + C
Sbjct: 270 YKPLPIVLSIVKNCLSYCFNLYHLASKSNQLSREAKVTKTVLLGVKIDIC 319


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 23.8 bits (49), Expect = 0.98
 Identities = 8/33 (24%), Positives = 19/33 (57%)
 Frame = +1

Query: 439 HLVSLRIILIDVFTNRNQIISVRYKCQELRILF 537
           HL+ L +++  +F    ++ S   +CQ+  ++F
Sbjct: 56  HLILLMVLVNLIFNTCGEVFSAWVRCQDQILIF 88


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 9/43 (20%), Positives = 24/43 (55%)
 Frame = -2

Query: 513 LISYANNLIAICKNINEDYTKTNQVNKERYKIKLYAKPQKNNF 385
           +++Y ++L+   + +NE      QV ++  + ++    +K+NF
Sbjct: 454 VVNYIDDLLVASETLNEHLEHLRQVFEKLKQARMTINLEKSNF 496


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 6/36 (16%), Positives = 19/36 (52%)
 Frame = +1

Query: 400 WFCV*FYFIPLLIHLVSLRIILIDVFTNRNQIISVR 507
           W+ +  + +PL++ + +   I I+++ +    +  R
Sbjct: 206 WYSISVFMVPLVVLIFTYTSICIEIWQSSESSLRPR 241


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,628
Number of Sequences: 336
Number of extensions: 2360
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)