Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_P23
(309 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0203 + 21555747-21555805,21555862-21555939,21556034-215560... 55 1e-08
08_01_0008 - 65366-65497,65588-65759,65846-65972,66058-66140,662... 53 4e-08
02_02_0321 - 8934512-8935504,8935581-8935715,8935831-8936217 51 2e-07
01_01_0605 + 4497308-4497472,4497719-4497904,4498898-4499003,449... 50 3e-07
05_01_0562 + 4907937-4907990,4908890-4909075,4909180-4909285,490... 49 7e-07
02_05_0261 + 27243898-27243938,27244068-27244157,27244293-272443... 48 2e-06
04_04_0814 + 28266590-28266615,28266780-28266860,28266986-282670... 44 2e-05
01_06_0175 + 27229878-27230056,27231102-27231159,27231230-272312... 37 0.003
09_06_0148 - 21214460-21214561,21214993-21215339,21215428-212155... 33 0.060
03_05_0124 + 21034963-21035181,21035618-21037466,21037485-210381... 28 1.3
02_04_0578 + 24020404-24021178,24021320-24021463,24022096-24022355 28 1.7
11_03_0174 - 11235667-11235855,11236557-11236652,11236981-11237145 27 4.0
08_02_0849 - 21841470-21841883,21843748-21843813,21844768-218449... 27 4.0
01_01_0397 + 3034059-3034691 27 4.0
01_07_0053 + 40772966-40773080,40773484-40773578,40773730-407738... 26 5.2
01_06_0203 - 27487469-27489787 26 5.2
08_02_0689 + 20066140-20066505,20067930-20068217 26 6.9
07_03_0857 - 22041551-22041871,22042802-22042948,22043048-22043683 26 6.9
03_05_0176 + 21546952-21547887,21548856-21548921,21549959-215508... 26 6.9
05_01_0012 - 70296-70398,70494-70648,70737-70843,71138-71216,713... 25 9.2
01_07_0045 - 40706873-40706956,40707083-40707253,40707585-407078... 25 9.2
01_06_1673 + 39059483-39059611,39059851-39060032,39060247-390604... 25 9.2
>09_06_0203 +
21555747-21555805,21555862-21555939,21556034-21556091,
21556191-21556235,21556514-21556549,21556855-21556935,
21557016-21557087,21557184-21557195
Length = 146
Score = 55.2 bits (127), Expect = 1e-08
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 15/96 (15%)
Frame = +3
Query: 66 KKNKMTDKPKRPMSAYMLWLNSAREQIKSEHPGLK-VTEIAKKGGEMWKSM--------- 215
K K +KPKRP SA+ +++ R+ K +HP +K V+ I K GG+ WKSM
Sbjct: 27 KAEKDPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKAGGDKWKSMTDAIRGYVV 86
Query: 216 -----KDKSIWXXXXXXXXXQYAKDLESYNANGGGG 308
KDK+ + +Y K +++YN GG
Sbjct: 87 VAVPCKDKAPFVTKAEKLKAEYTKKIDAYNNKQAGG 122
>08_01_0008 -
65366-65497,65588-65759,65846-65972,66058-66140,
66232-66329
Length = 203
Score = 53.2 bits (122), Expect = 4e-08
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Frame = +3
Query: 87 KPKRPMSAYMLWLNSAREQIKSEHPGLK-VTEIAKKGGEMWKSM--KDKSIWXXXXXXXX 257
K KRP +A+ L+++ R++ K+EHP K V+ +AK+GGE WKSM +DK +
Sbjct: 91 KGKRPPTAFFLFMSDFRKEYKAEHPDNKSVSAVAKEGGERWKSMSDEDKKPYLDKAAELK 150
Query: 258 XQYAKDLESYNANGGG 305
+Y S N GG
Sbjct: 151 AEYHNGERSDENNVGG 166
>02_02_0321 - 8934512-8935504,8935581-8935715,8935831-8936217
Length = 504
Score = 51.2 bits (117), Expect = 2e-07
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Frame = +3
Query: 84 DKPKRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKGGEMWKSM--KDKSIWXXXXXXXX 257
++PK+P S+++L+ AR Q+ E PG+ + + WK + +K W
Sbjct: 412 NRPKKPASSFLLFSKEARRQLAEERPGVASSTLTALVSVKWKELGEAEKQAWNGKAAEAM 471
Query: 258 XQYAKDLESYN---ANGGGG 308
Y +D+E Y A+GGGG
Sbjct: 472 AAYKRDMEEYTKAAASGGGG 491
Score = 43.2 bits (97), Expect = 4e-05
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +3
Query: 63 RKKNKMTDKPKRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKGGEMWKSMK--DKSIWX 236
+KK K KPK+PMSAY ++ R + +E V EI + GE WK+M +K+ +
Sbjct: 276 KKKEKDPSKPKQPMSAYFVYTQQRRAALVAEKK--NVPEIGRITGEEWKAMSEAEKAPFE 333
Query: 237 XXXXXXXXQYAKDLESY 287
+Y ++ +Y
Sbjct: 334 AAARKQREEYQVEMAAY 350
Score = 37.5 bits (83), Expect = 0.002
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 69 KNKMTDKPKRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKGGEMWKSM 215
K K + K+P AY+LW +IK E P E++ G WK++
Sbjct: 150 KGKAGHERKKPCPAYVLWCKDQWNEIKKESPDADFKEVSNALGAKWKAL 198
>01_01_0605 +
4497308-4497472,4497719-4497904,4498898-4499003,
4499062-4499216,4499341-4499424,4499498-4499589,
4499729-4499837,4499944-4500030,4500153-4500245,
4501144-4501341,4501481-4501632,4501724-4501874,
4501975-4502073,4502159-4502326,4502624-4502702,
4502870-4503000
Length = 684
Score = 50.4 bits (115), Expect = 3e-07
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +3
Query: 66 KKNKMTDKPKRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKGGEMWKSM--KDKSIWXX 239
KK K + PKR M+ +M + + R +K+ +P L TEIAKK GEMW+ M ++K +
Sbjct: 591 KKKKDPNAPKRAMTPFMYFSMAERGNMKNNNPDLPTTEIAKKLGEMWQKMTGEEKQPYIQ 650
Query: 240 XXXXXXXQYAKDLESY 287
+Y K+ Y
Sbjct: 651 QSQVDKKRYEKESAVY 666
>05_01_0562 +
4907937-4907990,4908890-4909075,4909180-4909285,
4909377-4909513,4909989-4910072,4910157-4910248,
4910358-4910466,4910554-4910640,4910737-4910829,
4911384-4911581,4911659-4911810,4911910-4912060,
4912174-4912272,4912362-4912535,4912680-4912758,
4912858-4912979
Length = 640
Score = 49.2 bits (112), Expect = 7e-07
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Frame = +3
Query: 66 KKNKMTDKPKRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKGGEMWKSM--KDKSIWXX 239
KK K + PKR ++ +M + + R +K+ +P L TEIAKK GE W+ M ++K +
Sbjct: 550 KKKKDPNAPKRAIAPFMYFSKAERANLKNSNPELATTEIAKKLGERWQKMTAEEKQPYVE 609
Query: 240 XXXXXXXQYAKDLESY 287
+YA++ +Y
Sbjct: 610 QSQVDKKRYAEESAAY 625
>02_05_0261 +
27243898-27243938,27244068-27244157,27244293-27244350,
27244441-27244485,27244778-27244855,27244940-27245041,
27245150-27245173
Length = 145
Score = 48.0 bits (109), Expect = 2e-06
Identities = 20/55 (36%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +3
Query: 63 RKKNKMTDKPKRPMSAYMLWLNSAREQIKSEHPGLK-VTEIAKKGGEMWKSMKDK 224
RKK + KPKRP SA+ ++++ R++ ++ HP K V ++K GE W++M ++
Sbjct: 24 RKKAAASGKPKRPPSAFFVFMSEFRQEYQAAHPDNKSVAAVSKAAGEKWRAMSEQ 78
>04_04_0814 +
28266590-28266615,28266780-28266860,28266986-28267043,
28267143-28267187,28268653-28268721,28268821-28268931,
28269038-28269046
Length = 132
Score = 44.0 bits (99), Expect = 2e-05
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 45 FKIFAIRKKNKMTDKPKRPMSAYMLWLNSAREQIKSEHPGLK-VTEIAKKGGEMWKSMKD 221
FK RKK KPKR ++ + +L R Q +HP K V + K GE W++M D
Sbjct: 10 FKAAGKRKKAGGAGKPKRGLTPFFAFLAEFRPQYMEKHPNTKGVAAVTKAAGEKWRAMSD 69
Query: 222 K 224
+
Sbjct: 70 E 70
>01_06_0175 +
27229878-27230056,27231102-27231159,27231230-27231274,
27232711-27232791,27232884-27232922
Length = 133
Score = 37.1 bits (82), Expect = 0.003
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 87 KPKRPMSAYMLWLNSAREQIKSEHPGLK-VTEIAKKGGEMWKSM 215
+PK+P +A+ ++ R+ K E+P +K + E+ K GE W +M
Sbjct: 48 RPKKPPTAFFYFMEDFRKTYKEENPSVKSMQEVGKACGEKWNTM 91
>09_06_0148 -
21214460-21214561,21214993-21215339,21215428-21215538,
21215673-21215835,21215921-21215999,21216110-21216228
Length = 306
Score = 32.7 bits (71), Expect = 0.060
Identities = 17/78 (21%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +3
Query: 63 RKKNKMTDKPKRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKGGEMWKSM--KDKSIWX 236
R+++ +P R SAY + ++K+ HP + E ++ G+ W + DK ++
Sbjct: 220 RQRDPAQPRPNR--SAYNFFFKEKHPELKATHPH-REREYSRMIGDAWNRLAADDKMVYY 276
Query: 237 XXXXXXXXQYAKDLESYN 290
+Y ++++ YN
Sbjct: 277 RHSAEDKERYKREMQEYN 294
>03_05_0124 + 21034963-21035181,21035618-21037466,21037485-21038194,
21038426-21038470,21038557-21038745
Length = 1003
Score = 28.3 bits (60), Expect = 1.3
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +3
Query: 27 HQFKNNFKIFAIRKKNKMTDKPKRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKGGEMW 206
HQ ++ K I+K K+T P P +L + + E+I + + +I K+ E
Sbjct: 874 HQLSSSLKKLVIKKCEKLTRLPTIPNLTILLLMGNLSEEIHNS-LDFPMLQILKEWIEWQ 932
Query: 207 KSMKDK 224
+S+ DK
Sbjct: 933 QSLIDK 938
>02_04_0578 + 24020404-24021178,24021320-24021463,24022096-24022355
Length = 392
Score = 27.9 bits (59), Expect = 1.7
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +3
Query: 33 FKNNFKIFAIRKKNKMTDK--PKRPMSAYMLWLNSAREQIKSEHPGLK 170
F++ + R N++ K P R + +LWL E + S HPG +
Sbjct: 177 FRSQMQTIISRACNELGVKAVPSRRCVSLLLWLEERYETVYSRHPGFQ 224
>11_03_0174 - 11235667-11235855,11236557-11236652,11236981-11237145
Length = 149
Score = 26.6 bits (56), Expect = 4.0
Identities = 10/45 (22%), Positives = 25/45 (55%)
Frame = -3
Query: 178 SVTFSPGCSDLICSLALLSHSI*ADIGRFGLSVILFFFLMAKILK 44
S+T + C +C++A+ ++ +IG+ V ++ + + +LK
Sbjct: 101 SITVNASCHPEVCTIAIHGKNLDVEIGKRQFRVTIYESMSSSVLK 145
>08_02_0849 -
21841470-21841883,21843748-21843813,21844768-21844951,
21845427-21847468,21848544-21848870
Length = 1010
Score = 26.6 bits (56), Expect = 4.0
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +3
Query: 27 HQFKNNFKIFAIRKKNKMTDKPKRPMSAYMLWLNSAREQIKSEHPGLKVTE 179
HQ K N IF RKK + +P + LWL S ++ S ++ +
Sbjct: 620 HQ-KENISIFE-RKKTSTSSEPAKETDPMDLWLTSNAQESNSSKDANRIND 668
>01_01_0397 + 3034059-3034691
Length = 210
Score = 26.6 bits (56), Expect = 4.0
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 87 KPKRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKG 194
K R + A ++ + ++R+ IKS G+K + AK+G
Sbjct: 26 KLARTVPAILMRIGTSRKAIKSTMKGMKAMKAAKRG 61
>01_07_0053 +
40772966-40773080,40773484-40773578,40773730-40773843,
40773984-40774088,40774179-40774250,40774293-40774346,
40774507-40774619,40774705-40774839,40774941-40775009,
40775140-40775227,40775327-40775398,40775476-40775576,
40775836-40775953,40776054-40776113,40776206-40776316,
40776499-40776573,40776821-40776854,40777453-40777805,
40778154-40778222,40778526-40778762
Length = 729
Score = 26.2 bits (55), Expect = 5.2
Identities = 13/58 (22%), Positives = 30/58 (51%)
Frame = +3
Query: 51 IFAIRKKNKMTDKPKRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKGGEMWKSMKDK 224
+F + + +K DKP + SAR+++ +++ + + + +K GE+W D+
Sbjct: 665 VFCVIEMDK-PDKPHNFEPEIYMMERSARDKLIADYNTMDIWDFNEKYGELWDFTVDR 721
>01_06_0203 - 27487469-27489787
Length = 772
Score = 26.2 bits (55), Expect = 5.2
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = -2
Query: 149 LDLFSGTVEPQH----IG*HRPLRLVRHFIFFPDGKNFEIIFELVHNQTVD 9
+D+ G VE Q IG + LVR + F +GK+ +++E V N+++D
Sbjct: 523 IDVTRGEVEFQAEMSVIGKINHMNLVRIWGFCSEGKHKLLVYEYVENESLD 573
>08_02_0689 + 20066140-20066505,20067930-20068217
Length = 217
Score = 25.8 bits (54), Expect = 6.9
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 109 ADIGRFGLSVILFFFLMAKILK 44
AD+G FG + FFL+ K+++
Sbjct: 190 ADVGLFGWHALSVFFLLPKVIR 211
>07_03_0857 - 22041551-22041871,22042802-22042948,22043048-22043683
Length = 367
Score = 25.8 bits (54), Expect = 6.9
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = -3
Query: 271 LAYCSLAL----AAFSSQILLSFIDFHISPPFLAISVTFSPGCSDLIC 140
LA C+L++ A F S + LSF + HIS + T C +L C
Sbjct: 63 LAECTLSIPVGFAGFKSLVELSFTEMHISEDMIQ---TLIENCPNLEC 107
>03_05_0176 +
21546952-21547887,21548856-21548921,21549959-21550877,
21551277-21551449,21551927-21552475
Length = 880
Score = 25.8 bits (54), Expect = 6.9
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 63 RKKNKMTDKPKRPMSAYMLWLNSAREQIKSEHPG 164
+KKNK T + KR +A ++ + +Q K H G
Sbjct: 804 KKKNKRTQRRKRKQNAQVMKQHQFEKQRKLYHAG 837
>05_01_0012 -
70296-70398,70494-70648,70737-70843,71138-71216,
71343-71423,71556-72581
Length = 516
Score = 25.4 bits (53), Expect = 9.2
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 309 HHHHHWHCTILSL 271
HHHHH H +LS+
Sbjct: 275 HHHHHHHHDLLSV 287
>01_07_0045 -
40706873-40706956,40707083-40707253,40707585-40707812,
40708414-40708423,40709108-40709553
Length = 312
Score = 25.4 bits (53), Expect = 9.2
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 309 HHHHHWHCTILS 274
HHHHH H +LS
Sbjct: 78 HHHHHHHRDVLS 89
>01_06_1673 +
39059483-39059611,39059851-39060032,39060247-39060445,
39060532-39060693,39060920-39061222,39061343-39061603
Length = 411
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2
Query: 215 H*FPHFTSFFGYF 177
H FPH T FFG+F
Sbjct: 99 HIFPHRTGFFGWF 111
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,040,893
Number of Sequences: 37544
Number of extensions: 169719
Number of successful extensions: 665
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 375959444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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