Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_P22
         (530 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   5.1  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   6.8  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   8.9  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = +3

Query: 411 SPPR-YDPERVKTIVEADLEDG 473
           SP + Y PE V  IVE  LE G
Sbjct: 269 SPKKVYAPEEVAEIVEYGLERG 290


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -3

Query: 390 VYFSFCFVRNLFQY 349
           VYFSF  VRN+ Q+
Sbjct: 97  VYFSFNSVRNVQQH 110


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 304 TFFHIVKLMTVCSIQILEKVS 366
           TFF + +L+T  +  IL KVS
Sbjct: 56  TFFALSELLTDLATSILLKVS 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,063
Number of Sequences: 336
Number of extensions: 2375
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)