Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_P21
(338 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58747-3|AAL27233.2| 420|Caenorhabditis elegans Hypothetical pr... 123 3e-29
U58747-1|AAL27234.3| 594|Caenorhabditis elegans Hypothetical pr... 123 3e-29
U58747-2|AAQ91905.1| 393|Caenorhabditis elegans Hypothetical pr... 114 2e-26
U42835-5|AAO61444.1| 517|Caenorhabditis elegans Uncoordinated p... 30 0.37
U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated p... 30 0.37
AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein. 30 0.37
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 27 2.6
Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical p... 27 3.4
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p... 27 3.4
Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical pr... 27 3.4
U58754-5|AAB00672.2| 330|Caenorhabditis elegans Serpentine rece... 27 3.4
M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein. 27 3.4
AF000264-10|AAC71129.2| 272|Caenorhabditis elegans Hypothetical... 27 3.4
U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical pr... 27 4.5
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr... 27 4.5
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 27 4.5
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 27 4.5
Z98261-1|CAB10931.1| 920|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z71266-11|CAA95847.1| 920|Caenorhabditis elegans Hypothetical p... 26 6.0
Z71258-16|CAA95786.1| 920|Caenorhabditis elegans Hypothetical p... 26 6.0
U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z82268-2|CAD89737.1| 389|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z82268-1|CAB05197.3| 508|Caenorhabditis elegans Hypothetical pr... 26 7.9
>U58747-3|AAL27233.2| 420|Caenorhabditis elegans Hypothetical
protein C55F2.1a protein.
Length = 420
Score = 123 bits (297), Expect = 3e-29
Identities = 58/103 (56%), Positives = 76/103 (73%)
Frame = +3
Query: 15 EEAVRDLIVATIALKYTQSNSVCYARDGQVIGIGAGQQSRIHCTRLAGGKAALWRLRSHP 194
++A+ DLIVATIALKY QSNSVC+A GQVIG+GAGQQSRIHCTRLAG KA W LR HP
Sbjct: 240 KQAIDDLIVATIALKYAQSNSVCFAHRGQVIGMGAGQQSRIHCTRLAGDKAMNWWLRQHP 299
Query: 195 AVLRAQDAFRAGVTRAVRANAIDNYVNGTIGTDMPLEQWNALF 323
VL ++ + R+ ++NAID +G +G+++ ++QW F
Sbjct: 300 TVLSL--PWKNAIKRSEKSNAIDVLCSGVLGSEIAIDQWQQYF 340
>U58747-1|AAL27234.3| 594|Caenorhabditis elegans Hypothetical
protein C55F2.1b protein.
Length = 594
Score = 123 bits (297), Expect = 3e-29
Identities = 58/103 (56%), Positives = 76/103 (73%)
Frame = +3
Query: 15 EEAVRDLIVATIALKYTQSNSVCYARDGQVIGIGAGQQSRIHCTRLAGGKAALWRLRSHP 194
++A+ DLIVATIALKY QSNSVC+A GQVIG+GAGQQSRIHCTRLAG KA W LR HP
Sbjct: 414 KQAIDDLIVATIALKYAQSNSVCFAHRGQVIGMGAGQQSRIHCTRLAGDKAMNWWLRQHP 473
Query: 195 AVLRAQDAFRAGVTRAVRANAIDNYVNGTIGTDMPLEQWNALF 323
VL ++ + R+ ++NAID +G +G+++ ++QW F
Sbjct: 474 TVLSL--PWKNAIKRSEKSNAIDVLCSGVLGSEIAIDQWQQYF 514
>U58747-2|AAQ91905.1| 393|Caenorhabditis elegans Hypothetical
protein C55F2.1c protein.
Length = 393
Score = 114 bits (274), Expect = 2e-26
Identities = 55/94 (58%), Positives = 71/94 (75%)
Frame = +3
Query: 15 EEAVRDLIVATIALKYTQSNSVCYARDGQVIGIGAGQQSRIHCTRLAGGKAALWRLRSHP 194
++A+ DLIVATIALKY QSNSVC+A GQVIG+GAGQQSRIHCTRLAG KA W LR HP
Sbjct: 284 KQAIDDLIVATIALKYAQSNSVCFAHRGQVIGMGAGQQSRIHCTRLAGDKAMNWWLRQHP 343
Query: 195 AVLRAQDAFRAGVTRAVRANAIDNYVNGTIGTDM 296
VL ++ + R+ ++NAID +G +G+++
Sbjct: 344 TVLSL--PWKNAIKRSEKSNAIDVLCSGVLGSEV 375
>U42835-5|AAO61444.1| 517|Caenorhabditis elegans Uncoordinated
protein 78, isoform b protein.
Length = 517
Score = 30.3 bits (65), Expect = 0.37
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 69 SNSVCYARDGQVIGIGAGQQSRIHCTRLAGGKAALWRLRSHPA 197
S+ V + D Q + +G GQ S++H +L+G + + HPA
Sbjct: 451 SSCVALSNDKQFVAVG-GQDSKVHVYKLSGASVSEVKTIVHPA 492
>U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated
protein 78, isoform a protein.
Length = 611
Score = 30.3 bits (65), Expect = 0.37
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 69 SNSVCYARDGQVIGIGAGQQSRIHCTRLAGGKAALWRLRSHPA 197
S+ V + D Q + +G GQ S++H +L+G + + HPA
Sbjct: 451 SSCVALSNDKQFVAVG-GQDSKVHVYKLSGASVSEVKTIVHPA 492
>AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein.
Length = 611
Score = 30.3 bits (65), Expect = 0.37
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 69 SNSVCYARDGQVIGIGAGQQSRIHCTRLAGGKAALWRLRSHPA 197
S+ V + D Q + +G GQ S++H +L+G + + HPA
Sbjct: 451 SSCVALSNDKQFVAVG-GQDSKVHVYKLSGASVSEVKTIVHPA 492
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 27.5 bits (58), Expect = 2.6
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -2
Query: 211 CARSTAGCERSRHSAALPPASRVQWIRDC*PAPMPITCP 95
C S GC S PP S V P PMPI CP
Sbjct: 228 CGSSCGGCNMGC-SCLPPPPSPVCMPPPPPPCPMPIPCP 265
>Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical protein
ZK524.2e protein.
Length = 1816
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 66 QSNSVCYARDGQVIGIGAGQQSRIHCTRLAGGKAALW 176
Q C+ARD +V+G+G Q S + G A+W
Sbjct: 1724 QVKDYCFARDDRVVGVGVLQLSSVVD---QAGSCAMW 1757
>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical protein
ZK524.2d protein.
Length = 2155
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 66 QSNSVCYARDGQVIGIGAGQQSRIHCTRLAGGKAALW 176
Q C+ARD +V+G+G Q S + G A+W
Sbjct: 2063 QVKDYCFARDDRVVGVGVLQLSSVVD---QAGSCAMW 2096
>Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical protein
ZK524.2c protein.
Length = 1475
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 66 QSNSVCYARDGQVIGIGAGQQSRIHCTRLAGGKAALW 176
Q C+ARD +V+G+G Q S + G A+W
Sbjct: 1383 QVKDYCFARDDRVVGVGVLQLSSVVD---QAGSCAMW 1416
>Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 66 QSNSVCYARDGQVIGIGAGQQSRIHCTRLAGGKAALW 176
Q C+ARD +V+G+G Q S + G A+W
Sbjct: 1721 QVKDYCFARDDRVVGVGVLQLSSVVD---QAGSCAMW 1754
>Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 66 QSNSVCYARDGQVIGIGAGQQSRIHCTRLAGGKAALW 176
Q C+ARD +V+G+G Q S + G A+W
Sbjct: 1724 QVKDYCFARDDRVVGVGVLQLSSVVD---QAGSCAMW 1757
>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 66 QSNSVCYARDGQVIGIGAGQQSRIHCTRLAGGKAALW 176
Q C+ARD +V+G+G Q S + G A+W
Sbjct: 2063 QVKDYCFARDDRVVGVGVLQLSSVVD---QAGSCAMW 2096
>Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 66 QSNSVCYARDGQVIGIGAGQQSRIHCTRLAGGKAALW 176
Q C+ARD +V+G+G Q S + G A+W
Sbjct: 1721 QVKDYCFARDDRVVGVGVLQLSSVVD---QAGSCAMW 1754
>Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical protein
ZK524.2e protein.
Length = 1816
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 66 QSNSVCYARDGQVIGIGAGQQSRIHCTRLAGGKAALW 176
Q C+ARD +V+G+G Q S + G A+W
Sbjct: 1724 QVKDYCFARDDRVVGVGVLQLSSVVD---QAGSCAMW 1757
>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical protein
ZK524.2d protein.
Length = 2155
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 66 QSNSVCYARDGQVIGIGAGQQSRIHCTRLAGGKAALW 176
Q C+ARD +V+G+G Q S + G A+W
Sbjct: 2063 QVKDYCFARDDRVVGVGVLQLSSVVD---QAGSCAMW 2096
>Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical protein
ZK524.2c protein.
Length = 1475
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 66 QSNSVCYARDGQVIGIGAGQQSRIHCTRLAGGKAALW 176
Q C+ARD +V+G+G Q S + G A+W
Sbjct: 1383 QVKDYCFARDDRVVGVGVLQLSSVVD---QAGSCAMW 1416
>Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 66 QSNSVCYARDGQVIGIGAGQQSRIHCTRLAGGKAALW 176
Q C+ARD +V+G+G Q S + G A+W
Sbjct: 1721 QVKDYCFARDDRVVGVGVLQLSSVVD---QAGSCAMW 1754
>U58754-5|AAB00672.2| 330|Caenorhabditis elegans Serpentine
receptor, class sx protein14 protein.
Length = 330
Score = 27.1 bits (57), Expect = 3.4
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +3
Query: 18 EAVRDLIVATIALKYTQSNSVCYARDGQVIGIGAGQQSRIH 140
E V++ V + + Y+Q+ +CY R + + + Q S+IH
Sbjct: 250 EMVQNYNVLAVVVAYSQNAYICYYRSSEYRRLLSEQISKIH 290
>M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.
Length = 1815
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 66 QSNSVCYARDGQVIGIGAGQQSRIHCTRLAGGKAALW 176
Q C+ARD +V+G+G Q S + G A+W
Sbjct: 1723 QVKDYCFARDDRVVGVGVLQLSSVVD---QAGSCAMW 1756
>AF000264-10|AAC71129.2| 272|Caenorhabditis elegans Hypothetical
protein F43E2.7a protein.
Length = 272
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 6 RVAEEAVRDLIVATIALKYTQSNSVCYARD-GQVIG 110
RV RD ++ +A+ + +VC+AR QVIG
Sbjct: 72 RVIRNGFRDSVIRVVAVTAARPFAVCFARQVAQVIG 107
>U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical
protein C37C3.6c protein.
Length = 1487
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2
Query: 259 IALARTARVTPARNASCARSTAGCERSRHSAALPP 155
+ LAR A + SCA S GC + R + A P
Sbjct: 868 VTLARGANLEGCGEPSCAASLYGCCKDRKTIAFGP 902
>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical
protein C37C3.6a protein.
Length = 1558
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2
Query: 259 IALARTARVTPARNASCARSTAGCERSRHSAALPP 155
+ LAR A + SCA S GC + R + A P
Sbjct: 868 VTLARGANLEGCGEPSCAASLYGCCKDRKTIAFGP 902
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical
protein C37C3.6b protein.
Length = 2167
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2
Query: 259 IALARTARVTPARNASCARSTAGCERSRHSAALPP 155
+ LAR A + SCA S GC + R + A P
Sbjct: 868 VTLARGANLEGCGEPSCAASLYGCCKDRKTIAFGP 902
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 26.6 bits (56), Expect = 4.5
Identities = 18/75 (24%), Positives = 30/75 (40%)
Frame = -2
Query: 313 FHCSRGMSVPIVPLT*LSIALARTARVTPARNASCARSTAGCERSRHSAALPPASRVQWI 134
F+C G+ +P + + A N +C + C+ A +P +R +
Sbjct: 20 FNCGNGLCIPEQKVC---NRINDCANFADESNCTCNENEFRCQSG---ACIPSKARCNHM 73
Query: 133 RDC*PAPMPITCPSR 89
+DC A I CP R
Sbjct: 74 QDCNDASDEIGCPFR 88
>Z98261-1|CAB10931.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 26.2 bits (55), Expect = 6.0
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +3
Query: 156 GGKAALWRLRSHPAVLRAQDAFRAGVTRAVRANAIDNY 269
G W L + PA+ QD + V R +R N N+
Sbjct: 807 GATTVYWDLENDPAIFEGQDDPQFEVYREMRKNCKSNW 844
>Z71266-11|CAA95847.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 26.2 bits (55), Expect = 6.0
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +3
Query: 156 GGKAALWRLRSHPAVLRAQDAFRAGVTRAVRANAIDNY 269
G W L + PA+ QD + V R +R N N+
Sbjct: 807 GATTVYWDLENDPAIFEGQDDPQFEVYREMRKNCKSNW 844
>Z71258-16|CAA95786.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 26.2 bits (55), Expect = 6.0
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +3
Query: 156 GGKAALWRLRSHPAVLRAQDAFRAGVTRAVRANAIDNY 269
G W L + PA+ QD + V R +R N N+
Sbjct: 807 GATTVYWDLENDPAIFEGQDDPQFEVYREMRKNCKSNW 844
>U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical
protein C24B5.2a protein.
Length = 451
Score = 26.2 bits (55), Expect = 6.0
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -2
Query: 262 SIALARTARVTPARNASCARSTAGCERSRHSAALP 158
++ +R+A V P+R AS AR T R+ A+LP
Sbjct: 108 NVKQSRSATVGPSRPASAARVTPRPTRATAPASLP 142
>Z82268-2|CAD89737.1| 389|Caenorhabditis elegans Hypothetical
protein F52B11.1b protein.
Length = 389
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 54 LKYTQSNSVCYARDGQVIGIGAGQQS 131
LKYT+ +C+AR + I GA +++
Sbjct: 164 LKYTKHIELCWARSEKAISFGAPEKN 189
>Z82268-1|CAB05197.3| 508|Caenorhabditis elegans Hypothetical
protein F52B11.1a protein.
Length = 508
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 54 LKYTQSNSVCYARDGQVIGIGAGQQS 131
LKYT+ +C+AR + I GA +++
Sbjct: 283 LKYTKHIELCWARSEKAISFGAPEKN 308
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,013,652
Number of Sequences: 27780
Number of extensions: 75404
Number of successful extensions: 287
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 285
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 429601520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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