Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_P20
(391 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y13939-1|CAA74278.1| 134|Drosophila melanogaster ribosomal prot... 192 1e-49
U92431-1|AAB51389.1| 134|Drosophila melanogaster ribosomal prot... 192 1e-49
BT011442-1|AAR99100.1| 147|Drosophila melanogaster RE59709p pro... 192 1e-49
AY070656-1|AAL48127.1| 134|Drosophila melanogaster RH03940p pro... 192 1e-49
AE014297-4527|AAN14211.1| 134|Drosophila melanogaster CG7939-PB... 192 1e-49
AE014297-4526|AAF57001.1| 134|Drosophila melanogaster CG7939-PA... 192 1e-49
AE014297-4525|AAN14210.1| 147|Drosophila melanogaster CG7939-PC... 192 1e-49
X00848-1|CAA25404.1| 133|Drosophila melanogaster ribosomal prot... 143 8e-35
BT030157-1|ABN49296.1| 126|Drosophila melanogaster IP17707p pro... 69 3e-12
BT023802-1|AAZ66309.1| 872|Drosophila melanogaster RE68448p pro... 29 1.6
AY128419-1|AAM75012.1| 741|Drosophila melanogaster GH14073p pro... 29 1.6
AY119611-1|AAM50265.1| 773|Drosophila melanogaster LD35363p pro... 29 1.6
AF239609-1|AAF63501.1| 741|Drosophila melanogaster SP1173 protein. 29 1.6
AE014297-1106|AAF54500.1| 872|Drosophila melanogaster CG6241-PA... 29 1.6
AE014296-1144|AAN12079.1| 741|Drosophila melanogaster CG10121-P... 29 1.6
AE014296-1143|AAN12078.1| 741|Drosophila melanogaster CG10121-P... 29 1.6
AE014296-1142|AAF50650.1| 741|Drosophila melanogaster CG10121-P... 29 1.6
AE014296-1141|AAN12077.1| 741|Drosophila melanogaster CG10121-P... 29 1.6
>Y13939-1|CAA74278.1| 134|Drosophila melanogaster ribosomal protein
49 protein.
Length = 134
Score = 192 bits (468), Expect = 1e-49
Identities = 87/107 (81%), Positives = 96/107 (89%)
Frame = +3
Query: 9 DRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSGFRKVLVHNVREL 188
DRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYGSNK+TRHMLP+GF+K LVHNVREL
Sbjct: 25 DRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVREL 84
Query: 189 EILMMQNRKYCAEIAHGVSSKKRKAIVERAQQLSIRVTNAAARLRSQ 329
E+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN RLRSQ
Sbjct: 85 EVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLRSQ 131
>U92431-1|AAB51389.1| 134|Drosophila melanogaster ribosomal protein
49 protein.
Length = 134
Score = 192 bits (468), Expect = 1e-49
Identities = 87/107 (81%), Positives = 96/107 (89%)
Frame = +3
Query: 9 DRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSGFRKVLVHNVREL 188
DRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYGSNK+TRHMLP+GF+K LVHNVREL
Sbjct: 25 DRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVREL 84
Query: 189 EILMMQNRKYCAEIAHGVSSKKRKAIVERAQQLSIRVTNAAARLRSQ 329
E+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN RLRSQ
Sbjct: 85 EVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLRSQ 131
>BT011442-1|AAR99100.1| 147|Drosophila melanogaster RE59709p
protein.
Length = 147
Score = 192 bits (468), Expect = 1e-49
Identities = 87/107 (81%), Positives = 96/107 (89%)
Frame = +3
Query: 9 DRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSGFRKVLVHNVREL 188
DRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYGSNK+TRHMLP+GF+K LVHNVREL
Sbjct: 38 DRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVREL 97
Query: 189 EILMMQNRKYCAEIAHGVSSKKRKAIVERAQQLSIRVTNAAARLRSQ 329
E+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN RLRSQ
Sbjct: 98 EVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLRSQ 144
>AY070656-1|AAL48127.1| 134|Drosophila melanogaster RH03940p
protein.
Length = 134
Score = 192 bits (468), Expect = 1e-49
Identities = 87/107 (81%), Positives = 96/107 (89%)
Frame = +3
Query: 9 DRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSGFRKVLVHNVREL 188
DRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYGSNK+TRHMLP+GF+K LVHNVREL
Sbjct: 25 DRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVREL 84
Query: 189 EILMMQNRKYCAEIAHGVSSKKRKAIVERAQQLSIRVTNAAARLRSQ 329
E+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN RLRSQ
Sbjct: 85 EVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLRSQ 131
>AE014297-4527|AAN14211.1| 134|Drosophila melanogaster CG7939-PB,
isoform B protein.
Length = 134
Score = 192 bits (468), Expect = 1e-49
Identities = 87/107 (81%), Positives = 96/107 (89%)
Frame = +3
Query: 9 DRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSGFRKVLVHNVREL 188
DRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYGSNK+TRHMLP+GF+K LVHNVREL
Sbjct: 25 DRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVREL 84
Query: 189 EILMMQNRKYCAEIAHGVSSKKRKAIVERAQQLSIRVTNAAARLRSQ 329
E+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN RLRSQ
Sbjct: 85 EVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLRSQ 131
>AE014297-4526|AAF57001.1| 134|Drosophila melanogaster CG7939-PA,
isoform A protein.
Length = 134
Score = 192 bits (468), Expect = 1e-49
Identities = 87/107 (81%), Positives = 96/107 (89%)
Frame = +3
Query: 9 DRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSGFRKVLVHNVREL 188
DRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYGSNK+TRHMLP+GF+K LVHNVREL
Sbjct: 25 DRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVREL 84
Query: 189 EILMMQNRKYCAEIAHGVSSKKRKAIVERAQQLSIRVTNAAARLRSQ 329
E+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN RLRSQ
Sbjct: 85 EVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLRSQ 131
>AE014297-4525|AAN14210.1| 147|Drosophila melanogaster CG7939-PC,
isoform C protein.
Length = 147
Score = 192 bits (468), Expect = 1e-49
Identities = 87/107 (81%), Positives = 96/107 (89%)
Frame = +3
Query: 9 DRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSGFRKVLVHNVREL 188
DRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYGSNK+TRHMLP+GF+K LVHNVREL
Sbjct: 38 DRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVREL 97
Query: 189 EILMMQNRKYCAEIAHGVSSKKRKAIVERAQQLSIRVTNAAARLRSQ 329
E+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN RLRSQ
Sbjct: 98 EVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLRSQ 144
>X00848-1|CAA25404.1| 133|Drosophila melanogaster ribosomal protein
49 protein.
Length = 133
Score = 143 bits (346), Expect = 8e-35
Identities = 66/96 (68%), Positives = 78/96 (81%)
Frame = +3
Query: 9 DRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSGFRKVLVHNVREL 188
DRY KL WRKP+GIDNRV RRFKGQYLMPNIGYGSNK+TRHMLP+GF+K LVHNVREL
Sbjct: 25 DRYAKLSHKWRKPKGIDNRVGRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVREL 84
Query: 189 EILMMQNRKYCAEIAHGVSSKKRKAIVERAQQLSIR 296
E+L+MQN + E+ S + K I+ERA+QLS+R
Sbjct: 85 EVLLMQNPRLLREMP-TASPPRSKEIIERAKQLSLR 119
>BT030157-1|ABN49296.1| 126|Drosophila melanogaster IP17707p
protein.
Length = 126
Score = 68.5 bits (160), Expect = 3e-12
Identities = 42/100 (42%), Positives = 53/100 (53%)
Frame = +2
Query: 35 LA*TERYRQQST*ALQGSILDAQHWLWFK*EDPSHATQRFS*SLGPQRSRTGDPDDAEQE 214
+A + YRQQS LQG++ DAQH L + P HA R G QR+R G P AE
Sbjct: 1 MAQAQGYRQQSASPLQGTVSDAQHRLRIEQAHPPHAAHRIQEVPGAQRARAGGPAHAEPR 60
Query: 215 ILRGNRTWRLLEKTEGYSRACPAAQHQGDQRGRSSPFPGE 334
+LR +R RLL++ +G RA AA Q RS F E
Sbjct: 61 LLRRDRPRRLLQEAQGDCRARQAAVGPPHQPQRSPAFSRE 100
>BT023802-1|AAZ66309.1| 872|Drosophila melanogaster RE68448p
protein.
Length = 872
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 167 GPQRSRTGDPDDAEQEILRGNRTWRLLEKTEGYSRACPAAQHQGDQ 304
G + + TGDP+D + NRT R L+ GY A++ +G+Q
Sbjct: 160 GKKSTLTGDPNDERAKFRLWNRTKRNLD-ASGYRSHGGASESEGEQ 204
>AY128419-1|AAM75012.1| 741|Drosophila melanogaster GH14073p
protein.
Length = 741
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -2
Query: 249 SRRRHVRFPR-SISCSASSGSPVRERCGPRLYENRWVACDGSSYLNHNQCWASSIDP 82
+RR +R P S C + G +ERCG +RW +G +N +C S +P
Sbjct: 112 TRRGEIREPLVSFGCDETGGFLFQERCGSNATCSRWDQKEGK--INLTRCTYSCQNP 166
>AY119611-1|AAM50265.1| 773|Drosophila melanogaster LD35363p
protein.
Length = 773
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 167 GPQRSRTGDPDDAEQEILRGNRTWRLLEKTEGYSRACPAAQHQGDQ 304
G + + TGDP+D + NRT R L+ GY A++ +G+Q
Sbjct: 61 GKKSTLTGDPNDERAKFRLWNRTKRNLD-ASGYRSHGGASESEGEQ 105
>AF239609-1|AAF63501.1| 741|Drosophila melanogaster SP1173 protein.
Length = 741
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -2
Query: 249 SRRRHVRFPR-SISCSASSGSPVRERCGPRLYENRWVACDGSSYLNHNQCWASSIDP 82
+RR +R P S C + G +ERCG +RW +G +N +C S +P
Sbjct: 112 TRRGEIREPLVSFGCDETGGFLFQERCGSNATCSRWDQKEGK--INLTRCTYSCQNP 166
>AE014297-1106|AAF54500.1| 872|Drosophila melanogaster CG6241-PA
protein.
Length = 872
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 167 GPQRSRTGDPDDAEQEILRGNRTWRLLEKTEGYSRACPAAQHQGDQ 304
G + + TGDP+D + NRT R L+ GY A++ +G+Q
Sbjct: 160 GKKSTLTGDPNDERAKFRLWNRTKRNLD-ASGYRSHGGASESEGEQ 204
>AE014296-1144|AAN12079.1| 741|Drosophila melanogaster CG10121-PD,
isoform D protein.
Length = 741
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -2
Query: 249 SRRRHVRFPR-SISCSASSGSPVRERCGPRLYENRWVACDGSSYLNHNQCWASSIDP 82
+RR +R P S C + G +ERCG +RW +G +N +C S +P
Sbjct: 112 TRRGEIREPLVSFGCDETGGFLFQERCGSNATCSRWDQKEGK--INLTRCTYSCQNP 166
>AE014296-1143|AAN12078.1| 741|Drosophila melanogaster CG10121-PC,
isoform C protein.
Length = 741
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -2
Query: 249 SRRRHVRFPR-SISCSASSGSPVRERCGPRLYENRWVACDGSSYLNHNQCWASSIDP 82
+RR +R P S C + G +ERCG +RW +G +N +C S +P
Sbjct: 112 TRRGEIREPLVSFGCDETGGFLFQERCGSNATCSRWDQKEGK--INLTRCTYSCQNP 166
>AE014296-1142|AAF50650.1| 741|Drosophila melanogaster CG10121-PB,
isoform B protein.
Length = 741
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -2
Query: 249 SRRRHVRFPR-SISCSASSGSPVRERCGPRLYENRWVACDGSSYLNHNQCWASSIDP 82
+RR +R P S C + G +ERCG +RW +G +N +C S +P
Sbjct: 112 TRRGEIREPLVSFGCDETGGFLFQERCGSNATCSRWDQKEGK--INLTRCTYSCQNP 166
>AE014296-1141|AAN12077.1| 741|Drosophila melanogaster CG10121-PA,
isoform A protein.
Length = 741
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -2
Query: 249 SRRRHVRFPR-SISCSASSGSPVRERCGPRLYENRWVACDGSSYLNHNQCWASSIDP 82
+RR +R P S C + G +ERCG +RW +G +N +C S +P
Sbjct: 112 TRRGEIREPLVSFGCDETGGFLFQERCGSNATCSRWDQKEGK--INLTRCTYSCQNP 166
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,221,084
Number of Sequences: 53049
Number of extensions: 359744
Number of successful extensions: 875
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1086986940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -