Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_P17
(389 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125955-5|AAO12427.1| 273|Caenorhabditis elegans Hypothetical ... 89 1e-18
AF125955-3|AAD14720.1| 336|Caenorhabditis elegans Hypothetical ... 89 1e-18
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 30 0.50
Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical p... 30 0.50
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 30 0.50
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 30 0.50
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 30 0.50
AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical ... 30 0.50
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 30 0.50
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 30 0.50
Z71261-2|CAA95805.1| 813|Caenorhabditis elegans Hypothetical pr... 29 0.88
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 29 1.5
AL021487-8|CAB76733.1| 320|Caenorhabditis elegans Hypothetical ... 28 2.0
Z81519-4|CAB04218.1| 592|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z75547-3|CAA99902.1| 335|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z19555-5|CAA79614.1| 200|Caenorhabditis elegans Hypothetical pr... 27 4.7
U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical p... 27 4.7
AC006748-1|AAF60514.2| 323|Caenorhabditis elegans Serpentine re... 27 4.7
Z68299-3|CAA92612.1| 262|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z81127-9|CAB03394.3| 735|Caenorhabditis elegans Hypothetical pr... 26 8.2
Z81056-11|CAB02911.3| 735|Caenorhabditis elegans Hypothetical p... 26 8.2
>AF125955-5|AAO12427.1| 273|Caenorhabditis elegans Hypothetical
protein F46E10.10b protein.
Length = 273
Score = 88.6 bits (210), Expect = 1e-18
Identities = 42/69 (60%), Positives = 52/69 (75%)
Frame = +1
Query: 181 MAAPIKVVVTGAAGQIAYSLLYQIASGAVFGPEQPVYLHLLDIAPMMGVLEGVVMELADC 360
M+AP++V+VTGAAGQI YS++ +IA G VFG EQPV L LLD+ +LEGVV EL DC
Sbjct: 1 MSAPLRVLVTGAAGQIGYSIVIRIADGTVFGKEQPVELVLLDVPQCSNILEGVVFELQDC 60
Query: 361 ALPLLAGVL 387
ALP L V+
Sbjct: 61 ALPTLFSVV 69
>AF125955-3|AAD14720.1| 336|Caenorhabditis elegans Hypothetical
protein F46E10.10a protein.
Length = 336
Score = 88.6 bits (210), Expect = 1e-18
Identities = 42/69 (60%), Positives = 52/69 (75%)
Frame = +1
Query: 181 MAAPIKVVVTGAAGQIAYSLLYQIASGAVFGPEQPVYLHLLDIAPMMGVLEGVVMELADC 360
M+AP++V+VTGAAGQI YS++ +IA G VFG EQPV L LLD+ +LEGVV EL DC
Sbjct: 1 MSAPLRVLVTGAAGQIGYSIVIRIADGTVFGKEQPVELVLLDVPQCSNILEGVVFELQDC 60
Query: 361 ALPLLAGVL 387
ALP L V+
Sbjct: 61 ALPTLFSVV 69
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 30.3 bits (65), Expect = 0.50
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 201 CCNWSCRSDCLLTSLSNCIWCCIWSRATCISPPS*HSTHDGCS*RCSNG 347
C + C++DC C + T I PP+ + + CS RC+NG
Sbjct: 354 CEKYMCKTDCENPRKVEGQCCPVCDEPTIIRPPATCPSLELCSLRCANG 402
>Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 30.3 bits (65), Expect = 0.50
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 201 CCNWSCRSDCLLTSLSNCIWCCIWSRATCISPPS*HSTHDGCS*RCSNG 347
C + C++DC C + T I PP+ + + CS RC+NG
Sbjct: 288 CEKYMCKTDCENPRKVEGQCCPVCDEPTIIRPPATCPSLELCSLRCANG 336
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 30.3 bits (65), Expect = 0.50
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 201 CCNWSCRSDCLLTSLSNCIWCCIWSRATCISPPS*HSTHDGCS*RCSNG 347
C + C++DC C + T I PP+ + + CS RC+NG
Sbjct: 288 CEKYMCKTDCENPRKVEGQCCPVCDEPTIIRPPATCPSLELCSLRCANG 336
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 30.3 bits (65), Expect = 0.50
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 201 CCNWSCRSDCLLTSLSNCIWCCIWSRATCISPPS*HSTHDGCS*RCSNG 347
C + C++DC C + T I PP+ + + CS RC+NG
Sbjct: 354 CEKYMCKTDCENPRKVEGQCCPVCDEPTIIRPPATCPSLELCSLRCANG 402
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 30.3 bits (65), Expect = 0.50
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 201 CCNWSCRSDCLLTSLSNCIWCCIWSRATCISPPS*HSTHDGCS*RCSNG 347
C + C++DC C + T I PP+ + + CS RC+NG
Sbjct: 288 CEKYMCKTDCENPRKVEGQCCPVCDEPTIIRPPATCPSLELCSLRCANG 336
>AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 30.3 bits (65), Expect = 0.50
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 201 CCNWSCRSDCLLTSLSNCIWCCIWSRATCISPPS*HSTHDGCS*RCSNG 347
C + C++DC C + T I PP+ + + CS RC+NG
Sbjct: 288 CEKYMCKTDCENPRKVEGQCCPVCDEPTIIRPPATCPSLELCSLRCANG 336
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 30.3 bits (65), Expect = 0.50
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 201 CCNWSCRSDCLLTSLSNCIWCCIWSRATCISPPS*HSTHDGCS*RCSNG 347
C + C++DC C + T I PP+ + + CS RC+NG
Sbjct: 288 CEKYMCKTDCENPRKVEGQCCPVCDEPTIIRPPATCPSLELCSLRCANG 336
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 30.3 bits (65), Expect = 0.50
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 201 CCNWSCRSDCLLTSLSNCIWCCIWSRATCISPPS*HSTHDGCS*RCSNG 347
C + C++DC C + T I PP+ + + CS RC+NG
Sbjct: 288 CEKYMCKTDCENPRKVEGQCCPVCDEPTIIRPPATCPSLELCSLRCANG 336
>Z71261-2|CAA95805.1| 813|Caenorhabditis elegans Hypothetical
protein F21C3.2 protein.
Length = 813
Score = 29.5 bits (63), Expect = 0.88
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 186 CTNQS-CCN-WSCRSDCLLTSLSNCIWCCIWSRATCISPPS*HSTHDGCS*RCSN 344
C N++ CC WS + +C N ++ +W +A+C ++ ++ CS R +N
Sbjct: 592 CFNENECCGPWSAKGEC----QKNPVYMNVWCKASCRQCTPNYNINEECSDRHTN 642
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 28.7 bits (61), Expect = 1.5
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Frame = +3
Query: 204 CNWSCRSDCLLTS-LSNCIWCCIWS-RATC------ISPPS*HSTHDGCS*RCSNGTC*L 359
CN CRS C TS LS CI C + R+TC + P + ++ + CS CS G +
Sbjct: 230 CNSGCRSTCSSTSTLSVCIPACQQTCRSTCSTAKTFVIPCTSGTSGNSCS--CSTGYS-I 286
Query: 360 CLATSCWS 383
C + C S
Sbjct: 287 CGSQCCRS 294
>AL021487-8|CAB76733.1| 320|Caenorhabditis elegans Hypothetical
protein Y45F10B.14 protein.
Length = 320
Score = 28.3 bits (60), Expect = 2.0
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 185 LHQSKLL*LELQVRLPTHFSIKLHLVLY-LVQSNLYISTF 301
LH L+ L Q LPT +SI ++V+Y L QS +Y S F
Sbjct: 227 LHSQLLMALTYQALLPTLYSI--NVVMYVLEQSGIYASPF 264
>Z81519-4|CAB04218.1| 592|Caenorhabditis elegans Hypothetical
protein F29C12.1a protein.
Length = 592
Score = 27.9 bits (59), Expect = 2.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 310 LCQEGGDIQVALDQIQHQMQFDREVSRQ 227
+ EGG QV Q+QHQ QF ++V Q
Sbjct: 90 ISNEGGP-QVQRPQVQHQQQFQQQVQAQ 116
>Z75547-3|CAA99902.1| 335|Caenorhabditis elegans Hypothetical
protein R11D1.2 protein.
Length = 335
Score = 27.9 bits (59), Expect = 2.7
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = -3
Query: 384 NSSKKWQGTVSKFHYYTFKNTHHGCYVKKVEIYRLLWTKYSTRCNLIEK 238
N+ +++ +S+F Y + + H C+VK ++Y L + RC E+
Sbjct: 165 NAFEEFHYDLSRFEYDSLE-IKHACWVKFSQLYDLKCKSIALRCTKFER 212
>Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical
protein ZK1067.7 protein.
Length = 373
Score = 27.9 bits (59), Expect = 2.7
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +3
Query: 195 QSCCNWSCRSD---CLLTSLSNCIWCCIWSRATCISPPS*HSTHDGCS*RCSN 344
Q CN C + LL +NC C ++C +P S ++ CS C N
Sbjct: 83 QPACNQQCGGNNQVILLPQTNNCNQCQQQCISSCATPICAQSCNNQCSSSCGN 135
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 27.1 bits (57), Expect = 4.7
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 183 GCTNQSCCNWSCRSDCLLT-SLSNCIWCCIWSRATCIS 293
GC S C SCRS C T S S C + + TC++
Sbjct: 28 GCQASSSCANSCRSTCRPTCSSSGGFGCRMNCQNTCVN 65
>Z19555-5|CAA79614.1| 200|Caenorhabditis elegans Hypothetical
protein F02A9.1 protein.
Length = 200
Score = 27.1 bits (57), Expect = 4.7
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 177 KYGCTNQSCCNWSCRSDCLLTSLSNCI 257
+YGC CN SCR +++ + CI
Sbjct: 133 RYGCPQTPLCNGSCRFMVIVSLAAFCI 159
>U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical
protein T08A9.1 protein.
Length = 1330
Score = 27.1 bits (57), Expect = 4.7
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +1
Query: 91 LKICEHLIRKNTCRKLVISLQETLLEKDKNMAAPI 195
LK CE RKN KLV + ET D+N PI
Sbjct: 294 LKSCEE--RKNLVHKLVAQILETPKINDQNKLPPI 326
>AC006748-1|AAF60514.2| 323|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 66 protein.
Length = 323
Score = 27.1 bits (57), Expect = 4.7
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -2
Query: 181 YFYLFLEVFPVNL*LIFDKCFYVLDVRRFLIYPLNALL 68
YF L +F LI++ +L RFL+YP NA +
Sbjct: 15 YFLLCSSLFLAMFILIYNFTTPILKPMRFLLYPANAAM 52
>Z68299-3|CAA92612.1| 262|Caenorhabditis elegans Hypothetical
protein T04B2.6 protein.
Length = 262
Score = 26.6 bits (56), Expect = 6.2
Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -2
Query: 349 VPLLHLQEHPSWVLCQEGG-DIQVALDQ 269
+P+L HP WVL + GG D ++ +++
Sbjct: 197 IPVLIATIHPGWVLTEMGGSDAEITVEE 224
>Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical
protein T21B6.3 protein.
Length = 821
Score = 26.6 bits (56), Expect = 6.2
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 186 CTNQSCCNWS 215
C QSCCNWS
Sbjct: 699 CEGQSCCNWS 708
>Z81127-9|CAB03394.3| 735|Caenorhabditis elegans Hypothetical
protein F09F3.9 protein.
Length = 735
Score = 26.2 bits (55), Expect = 8.2
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -3
Query: 366 QGTVSKFHYYTFKNTHHGCYVKKVEIYRLLWTKYSTRCNLIEK 238
+G +S HY KN ++GC V EI W S L+ K
Sbjct: 265 EGLLSTRHY---KNIYNGCRVPGKEIDHFQWNPPSKHVLLVHK 304
>Z81056-11|CAB02911.3| 735|Caenorhabditis elegans Hypothetical
protein F09F3.9 protein.
Length = 735
Score = 26.2 bits (55), Expect = 8.2
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -3
Query: 366 QGTVSKFHYYTFKNTHHGCYVKKVEIYRLLWTKYSTRCNLIEK 238
+G +S HY KN ++GC V EI W S L+ K
Sbjct: 265 EGLLSTRHY---KNIYNGCRVPGKEIDHFQWNPPSKHVLLVHK 304
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,882,728
Number of Sequences: 27780
Number of extensions: 176481
Number of successful extensions: 590
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 587646290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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