Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_P15
         (377 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   3.6  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   4.8  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   6.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   6.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   6.4  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    20   8.4  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    20   8.4  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +1

Query: 253 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQL 348
           E  A  H+    + D+EPTV         RQL
Sbjct: 236 ERRAQSHLEAHCYFDIEPTVQQHQPVTVNRQL 267


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 154 PSRHFRSGLR 125
           P RH+RSGL+
Sbjct: 139 PLRHYRSGLK 148


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 152 QQAFPIWTPA 123
           +QAFP W P+
Sbjct: 237 RQAFPFWLPS 246


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 152 QQAFPIWTPA 123
           +QAFP W P+
Sbjct: 237 RQAFPFWLPS 246


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 284 ARGTCLPAPVSLKNVL 237
           A GTC   P  L+N++
Sbjct: 6   ATGTCQKKPTKLRNLI 21


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 290 KTARGTCLPAPVSLKNVLKESSPPP 216
           KT R      P+S+ N L+ S P P
Sbjct: 379 KTDRLLYSVLPISVANELRHSRPVP 403


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 290 KTARGTCLPAPVSLKNVLKESSPPP 216
           KT R      P+S+ N L+ S P P
Sbjct: 379 KTDRLLYSVLPISVANELRHSRPVP 403


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,155
Number of Sequences: 438
Number of extensions: 2868
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9176370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)