Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_P13
(487 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55375-5|AAC69045.1| 126|Caenorhabditis elegans Profilin protei... 90 7e-19
AY530910-1|AAT01435.1| 126|Caenorhabditis elegans profilin-3 pr... 90 7e-19
AY530908-1|AAT01433.1| 132|Caenorhabditis elegans profilin-1 pr... 71 6e-13
AL034393-15|CAA22318.1| 132|Caenorhabditis elegans Hypothetical... 71 6e-13
U40941-2|AAA81708.3| 131|Caenorhabditis elegans Profilin protei... 67 7e-12
AY530909-1|AAT01434.1| 131|Caenorhabditis elegans profilin-2 pr... 67 7e-12
AF067613-13|ABA54415.1| 443|Caenorhabditis elegans Hypothetical... 32 0.25
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 29 2.4
AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical... 27 5.5
AC024787-1|AAF60607.2| 469|Caenorhabditis elegans Hypothetical ... 27 7.2
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr... 27 9.5
AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical... 27 9.5
>U55375-5|AAC69045.1| 126|Caenorhabditis elegans Profilin protein 3
protein.
Length = 126
Score = 90.2 bits (214), Expect = 7e-19
Identities = 48/126 (38%), Positives = 67/126 (53%)
Frame = +2
Query: 86 MSW*DYVDKQLMASRCVSKAAIAGHDGNVWAKSEGFEISKDEVAKIVAGFENESLLTSGG 265
MSW D ++ L+ S VSKAAI G DG VWAKS+ F IS +E F + L G
Sbjct: 1 MSWSDIINNNLIGSGNVSKAAILGFDGAVWAKSDNFNISVEEAVAAGKAFTSLDALLGTG 60
Query: 266 VTIAGTRYIYLSGTERIIRAKLGKVGVHRMKTQQAVVISLYEEPIQPQQAASVVEKLGDY 445
+ + G +++ L+ I K G G KT QAV+IS+YE+ +QP+ + L DY
Sbjct: 61 LRLEGQKFLVLNADNDRIIGKQGGSGFFIYKTIQAVIISIYEKGLQPEMCSKTTGALADY 120
Query: 446 LITCGY 463
+ Y
Sbjct: 121 FRSIKY 126
>AY530910-1|AAT01435.1| 126|Caenorhabditis elegans profilin-3
protein.
Length = 126
Score = 90.2 bits (214), Expect = 7e-19
Identities = 48/126 (38%), Positives = 67/126 (53%)
Frame = +2
Query: 86 MSW*DYVDKQLMASRCVSKAAIAGHDGNVWAKSEGFEISKDEVAKIVAGFENESLLTSGG 265
MSW D ++ L+ S VSKAAI G DG VWAKS+ F IS +E F + L G
Sbjct: 1 MSWSDIINNNLIGSGNVSKAAILGFDGAVWAKSDNFNISVEEAVAAGKAFTSLDALLGTG 60
Query: 266 VTIAGTRYIYLSGTERIIRAKLGKVGVHRMKTQQAVVISLYEEPIQPQQAASVVEKLGDY 445
+ + G +++ L+ I K G G KT QAV+IS+YE+ +QP+ + L DY
Sbjct: 61 LRLEGQKFLVLNADNDRIIGKQGGSGFFIYKTIQAVIISIYEKGLQPEMCSKTTGALADY 120
Query: 446 LITCGY 463
+ Y
Sbjct: 121 FRSIKY 126
>AY530908-1|AAT01433.1| 132|Caenorhabditis elegans profilin-1
protein.
Length = 132
Score = 70.5 bits (165), Expect = 6e-13
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 5/129 (3%)
Frame = +2
Query: 92 W*DYVDKQLMASRCVSKAAIAGH-DGNVWAKSEG---FEISKDEVAKIVAGFENESLLTS 259
W Y+D A+ + + AI G DG+VWA++E F+ S++E+ VA F + + + +
Sbjct: 4 WNAYIDTMTAAAPSIKRCAIVGAADGSVWARTEADNVFKASEEELKTFVALFNDVTQVPA 63
Query: 260 GGVTIAGTRYIYLSGTERIIRAKLGKVGVHRMKTQQAVVISLYEEPIQ-PQQAASVVEKL 436
G I G Y+ E +I K G +KT+ AV+I++YE P + Q VE +
Sbjct: 64 KGADIEGVHYVVPRTEESLIFGKKENTGFFAVKTKSAVLIAVYEGPNEVAAQVRKAVESM 123
Query: 437 GDYLITCGY 463
YL GY
Sbjct: 124 QTYLNNAGY 132
>AL034393-15|CAA22318.1| 132|Caenorhabditis elegans Hypothetical
protein Y18D10A.20 protein.
Length = 132
Score = 70.5 bits (165), Expect = 6e-13
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 5/129 (3%)
Frame = +2
Query: 92 W*DYVDKQLMASRCVSKAAIAGH-DGNVWAKSEG---FEISKDEVAKIVAGFENESLLTS 259
W Y+D A+ + + AI G DG+VWA++E F+ S++E+ VA F + + + +
Sbjct: 4 WNAYIDTMTAAAPSIKRCAIVGAADGSVWARTEADNVFKASEEELKTFVALFNDVTQVPA 63
Query: 260 GGVTIAGTRYIYLSGTERIIRAKLGKVGVHRMKTQQAVVISLYEEPIQ-PQQAASVVEKL 436
G I G Y+ E +I K G +KT+ AV+I++YE P + Q VE +
Sbjct: 64 KGADIEGVHYVVPRTEESLIFGKKENTGFFAVKTKSAVLIAVYEGPNEVAAQVRKAVESM 123
Query: 437 GDYLITCGY 463
YL GY
Sbjct: 124 QTYLNNAGY 132
>U40941-2|AAA81708.3| 131|Caenorhabditis elegans Profilin protein 2
protein.
Length = 131
Score = 66.9 bits (156), Expect = 7e-12
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Frame = +2
Query: 92 W*DYVDKQLMASRCVSKAAIAGHDGNVWAKS---EGFEISKDEVAKIVAGFENESLLTSG 262
W DY+ S + +AAI G DG+VWA+S F ++ E+ + A F + + +
Sbjct: 4 WDDYIKLLFGKSPAIKRAAIIGSDGSVWARSGDANAFRATEVELKRFAALFNDINSVPGT 63
Query: 263 GVTIAGTRYIYLSGTERIIRAKLGKVGVHRMKTQQAVVISLYE-EPIQPQQAASVVEKLG 439
G + YI E++I K + G KT QA+VI++YE + Q + VE +
Sbjct: 64 GADLEEIHYIVPRVEEKLIFGKKEQTGFFAAKTNQAIVIAMYEGDNAQSASVRAGVEYIA 123
Query: 440 DYLITCGY 463
YL + GY
Sbjct: 124 QYLASSGY 131
>AY530909-1|AAT01434.1| 131|Caenorhabditis elegans profilin-2
protein.
Length = 131
Score = 66.9 bits (156), Expect = 7e-12
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Frame = +2
Query: 92 W*DYVDKQLMASRCVSKAAIAGHDGNVWAKS---EGFEISKDEVAKIVAGFENESLLTSG 262
W DY+ S + +AAI G DG+VWA+S F ++ E+ + A F + + +
Sbjct: 4 WDDYIKLLFGKSPAIKRAAIIGSDGSVWARSGDANAFRATEVELKRFAALFNDINSVPGT 63
Query: 263 GVTIAGTRYIYLSGTERIIRAKLGKVGVHRMKTQQAVVISLYE-EPIQPQQAASVVEKLG 439
G + YI E++I K + G KT QA+VI++YE + Q + VE +
Sbjct: 64 GADLEEIHYIVPRVEEKLIFGKKEQTGFFAAKTNQAIVIAMYEGDNAQSASVRAGVEYIA 123
Query: 440 DYLITCGY 463
YL + GY
Sbjct: 124 QYLASSGY 131
>AF067613-13|ABA54415.1| 443|Caenorhabditis elegans Hypothetical
protein F56D6.1 protein.
Length = 443
Score = 31.9 bits (69), Expect = 0.25
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -2
Query: 279 PAIVTPPLVRSDSFSKPATIFATSSFDISNPSDL 178
P++VT L+ S S+P T FA S FD+ P D+
Sbjct: 180 PSVVTDTLINSYLSSQPVT-FAVSRFDLRQPEDI 212
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 28.7 bits (61), Expect = 2.4
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 40 CV*SSVVLFLIELIQNELVRLCRQTVNGL-QMCFKGSNCRSRRKCLGQV 183
CV S I + +L+R + + L + CF+ S+C S+R+CL V
Sbjct: 1235 CVVSPREKRFISDVHRKLLRFTPKKLAKLGEYCFRNSHCESQRQCLKNV 1283
>AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical
protein R12E2.1 protein.
Length = 531
Score = 27.5 bits (58), Expect = 5.5
Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 3/115 (2%)
Frame = +2
Query: 98 DYVDKQLMASRCVSKAAIAGHDGNVWAKSEGFEISKDEVAKIVAGFENESLLTSGGVTIA 277
DY+ KQL S C+ A A S E + ++++ E + L TI
Sbjct: 147 DYLKKQLDPSNCLGIRAFADTHSCKELLSSADEFALKNFSRVIGKEEFQMLTVESLTTII 206
Query: 278 GTRYIYLSGTERIIRAKLGKV--GVHRMKTQQAVVISLYEEPI-QPQQAASVVEK 433
+ + + E + A + V + + KT ++++S P+ P+ SVV +
Sbjct: 207 KSDKLNAASEELVFSAVIQWVRHDISKRKTHLSMLLSHVRLPLCTPKFLVSVVSE 261
>AC024787-1|AAF60607.2| 469|Caenorhabditis elegans Hypothetical
protein Y46C8AR.1 protein.
Length = 469
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -2
Query: 279 PAIVTPPLVRSDSFSKPATIFATSSFDISNPSDL 178
P++VT L S S S + +A S FD+ P D+
Sbjct: 193 PSVVTDALYYS-SLSSQSVTYAVSRFDLRQPEDI 225
>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical
protein K03H1.5 protein.
Length = 1385
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 376 NFSL*RTHSTPAGRIRSREVRRLFNYLWLLEIEMRRD 486
NF +T T R+R+R + +F+ + L+ I M RD
Sbjct: 495 NFENWQTSCTRLSRVRARCIMPMFHKIGLVPIRMSRD 531
>AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical
protein Y106G6H.12 protein.
Length = 975
Score = 26.6 bits (56), Expect = 9.5
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = -2
Query: 357 FMRCTPTLPSFARMIRSVPLR*MYRVPAIVTPPLVRSDSFSKPATIFATSSFDISNPSDL 178
F + TPT +F+ +++ L + I +PP ++ + + P+T +T+S+ S +
Sbjct: 203 FYKTTPT-KTFSSTPKNLKLENLKSPEDIKSPPPIKKNFVATPSTSKSTASYSYSRETPK 261
Query: 177 AQT 169
+T
Sbjct: 262 RET 264
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,775,684
Number of Sequences: 27780
Number of extensions: 214418
Number of successful extensions: 529
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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