Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_P10
(445 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 0.98
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 0.98
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 0.98
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 0.98
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 0.98
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 23 0.98
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 0.98
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 21 4.0
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 21 6.9
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.4 bits (48), Expect = 0.98
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +2
Query: 251 PFHHFQHGSPFQFKFH 298
P+H +G P+QF H
Sbjct: 288 PYHMSPYGHPYQFDLH 303
Score = 21.4 bits (43), Expect = 4.0
Identities = 7/30 (23%), Positives = 17/30 (56%)
Frame = -1
Query: 217 LCLGVEGVRAGVEHRPLVWVRQHLFSSGDV 128
LCL ++ ++R + W ++H +S ++
Sbjct: 257 LCLTERQIKIWFQNRRMKWKKEHKMASMNI 286
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.4 bits (48), Expect = 0.98
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +2
Query: 251 PFHHFQHGSPFQFKFH 298
P+H +G P+QF H
Sbjct: 288 PYHMSPYGHPYQFDLH 303
Score = 21.4 bits (43), Expect = 4.0
Identities = 7/30 (23%), Positives = 17/30 (56%)
Frame = -1
Query: 217 LCLGVEGVRAGVEHRPLVWVRQHLFSSGDV 128
LCL ++ ++R + W ++H +S ++
Sbjct: 257 LCLTERQIKIWFQNRRMKWKKEHKMASMNI 286
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.4 bits (48), Expect = 0.98
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +2
Query: 251 PFHHFQHGSPFQFKFH 298
P+H +G P+QF H
Sbjct: 288 PYHMSPYGHPYQFDLH 303
Score = 21.4 bits (43), Expect = 4.0
Identities = 7/30 (23%), Positives = 17/30 (56%)
Frame = -1
Query: 217 LCLGVEGVRAGVEHRPLVWVRQHLFSSGDV 128
LCL ++ ++R + W ++H +S ++
Sbjct: 257 LCLTERQIKIWFQNRRMKWKKEHKMASMNI 286
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 23.4 bits (48), Expect = 0.98
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +2
Query: 251 PFHHFQHGSPFQFKFH 298
P+H +G P+QF H
Sbjct: 244 PYHMSPYGHPYQFDLH 259
Score = 21.4 bits (43), Expect = 4.0
Identities = 7/30 (23%), Positives = 17/30 (56%)
Frame = -1
Query: 217 LCLGVEGVRAGVEHRPLVWVRQHLFSSGDV 128
LCL ++ ++R + W ++H +S ++
Sbjct: 213 LCLTERQIKIWFQNRRMKWKKEHKMASMNI 242
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 23.4 bits (48), Expect = 0.98
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +2
Query: 251 PFHHFQHGSPFQFKFH 298
P+H +G P+QF H
Sbjct: 288 PYHMSPYGHPYQFDLH 303
Score = 21.4 bits (43), Expect = 4.0
Identities = 7/30 (23%), Positives = 17/30 (56%)
Frame = -1
Query: 217 LCLGVEGVRAGVEHRPLVWVRQHLFSSGDV 128
LCL ++ ++R + W ++H +S ++
Sbjct: 257 LCLTERQIKIWFQNRRMKWKKEHKMASMNI 286
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 23.4 bits (48), Expect = 0.98
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +2
Query: 251 PFHHFQHGSPFQFKFH 298
P+H +G P+QF H
Sbjct: 76 PYHMSPYGHPYQFDLH 91
Score = 21.4 bits (43), Expect = 4.0
Identities = 7/30 (23%), Positives = 17/30 (56%)
Frame = -1
Query: 217 LCLGVEGVRAGVEHRPLVWVRQHLFSSGDV 128
LCL ++ ++R + W ++H +S ++
Sbjct: 45 LCLTERQIKIWFQNRRMKWKKEHKMASMNI 74
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 23.4 bits (48), Expect = 0.98
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +2
Query: 251 PFHHFQHGSPFQFKFH 298
P+H +G P+QF H
Sbjct: 288 PYHMSPYGHPYQFDLH 303
Score = 21.4 bits (43), Expect = 4.0
Identities = 7/30 (23%), Positives = 17/30 (56%)
Frame = -1
Query: 217 LCLGVEGVRAGVEHRPLVWVRQHLFSSGDV 128
LCL ++ ++R + W ++H +S ++
Sbjct: 257 LCLTERQIKIWFQNRRMKWKKEHKMASMNI 286
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 21.4 bits (43), Expect = 4.0
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -2
Query: 267 WKWWKGLLKGPPCPPARC 214
+KW GLL+G P C
Sbjct: 300 YKWNHGLLQGDPLSGCLC 317
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 20.6 bits (41), Expect = 6.9
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -2
Query: 243 KGPPCPPARC 214
+ PPC PA C
Sbjct: 159 RAPPCDPAVC 168
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,247
Number of Sequences: 336
Number of extensions: 1436
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 9985735
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -