BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_P09
(142 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 20 2.3
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 20 2.3
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 20 2.3
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 20 2.3
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 20 2.3
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 20 2.3
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 20 2.3
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 20 2.3
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 20 2.3
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 20 2.3
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 20 2.3
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 20 2.3
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 20 2.3
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 20 2.3
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 20 2.3
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 20 2.3
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 19 5.4
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 19 5.4
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 18 9.5
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 18 9.5
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 18 9.5
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 18 9.5
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 18 9.5
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 18 9.5
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 18 9.5
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 18 9.5
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 18 9.5
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 18 9.5
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.2 bits (40), Expect = 2.3
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -3
Query: 89 NHQKYANHNKY 57
N+ KY+N+N Y
Sbjct: 87 NNYKYSNYNNY 97
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.2 bits (40), Expect = 2.3
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -3
Query: 89 NHQKYANHNKY 57
N+ KY+N+N Y
Sbjct: 87 NNYKYSNYNNY 97
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 2.3
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -3
Query: 89 NHQKYANHNKY 57
N+ KY+N+N Y
Sbjct: 87 NNYKYSNYNNY 97
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 2.3
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -3
Query: 89 NHQKYANHNKY 57
N+ KY+N+N Y
Sbjct: 87 NNYKYSNYNNY 97
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 2.3
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -3
Query: 89 NHQKYANHNKY 57
N+ KY+N+N Y
Sbjct: 87 NNYKYSNYNNY 97
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 2.3
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -3
Query: 89 NHQKYANHNKY 57
N+ KY+N+N Y
Sbjct: 87 NNYKYSNYNNY 97
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 2.3
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -3
Query: 89 NHQKYANHNKY 57
N+ KY+N+N Y
Sbjct: 87 NNYKYSNYNNY 97
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 2.3
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -3
Query: 89 NHQKYANHNKY 57
N+ KY+N+N Y
Sbjct: 87 NNYKYSNYNNY 97
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 2.3
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -3
Query: 89 NHQKYANHNKY 57
N+ KY+N+N Y
Sbjct: 87 NNYKYSNYNNY 97
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.2 bits (40), Expect = 2.3
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -3
Query: 89 NHQKYANHNKY 57
N+ KY+N+N Y
Sbjct: 87 NNYKYSNYNNY 97
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.2 bits (40), Expect = 2.3
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -3
Query: 89 NHQKYANHNKY 57
N+ KY+N+N Y
Sbjct: 87 NNYKYSNYNNY 97
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.2 bits (40), Expect = 2.3
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -3
Query: 89 NHQKYANHNKY 57
N+ KY+N+N Y
Sbjct: 87 NNYKYSNYNNY 97
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.2 bits (40), Expect = 2.3
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -3
Query: 89 NHQKYANHNKY 57
N+ KY+N+N Y
Sbjct: 87 NNYKYSNYNNY 97
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 20.2 bits (40), Expect = 2.3
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -3
Query: 89 NHQKYANHNKY 57
N+ KY+N+N Y
Sbjct: 87 NNYKYSNYNNY 97
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 20.2 bits (40), Expect = 2.3
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -3
Query: 89 NHQKYANHNKY 57
N+ KY+N+N Y
Sbjct: 320 NNYKYSNYNNY 330
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 20.2 bits (40), Expect = 2.3
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -3
Query: 89 NHQKYANHNKY 57
N+ KY+N+N Y
Sbjct: 320 NNYKYSNYNNY 330
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 19.0 bits (37), Expect = 5.4
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = +3
Query: 51 LKIFIMICIFLMI 89
++IF +IC+ L+I
Sbjct: 277 MRIFNLICMMLLI 289
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 19.0 bits (37), Expect = 5.4
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = +3
Query: 51 LKIFIMICIFLMI 89
++IF +IC+ L+I
Sbjct: 245 MRIFNLICMMLLI 257
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 18.2 bits (35), Expect = 9.5
Identities = 5/11 (45%), Positives = 8/11 (72%)
Frame = -3
Query: 89 NHQKYANHNKY 57
N+ Y+N+N Y
Sbjct: 87 NNYNYSNYNNY 97
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 18.2 bits (35), Expect = 9.5
Identities = 5/11 (45%), Positives = 8/11 (72%)
Frame = -3
Query: 89 NHQKYANHNKY 57
N+ Y+N+N Y
Sbjct: 87 NNYNYSNYNNY 97
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 18.2 bits (35), Expect = 9.5
Identities = 5/11 (45%), Positives = 8/11 (72%)
Frame = -3
Query: 89 NHQKYANHNKY 57
N+ Y+N+N Y
Sbjct: 87 NNYNYSNYNNY 97
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 18.2 bits (35), Expect = 9.5
Identities = 5/11 (45%), Positives = 8/11 (72%)
Frame = -3
Query: 89 NHQKYANHNKY 57
N+ Y+N+N Y
Sbjct: 87 NNYNYSNYNNY 97
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 18.2 bits (35), Expect = 9.5
Identities = 5/11 (45%), Positives = 8/11 (72%)
Frame = -3
Query: 89 NHQKYANHNKY 57
N+ Y+N+N Y
Sbjct: 87 NNYNYSNYNNY 97
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 18.2 bits (35), Expect = 9.5
Identities = 5/11 (45%), Positives = 8/11 (72%)
Frame = -3
Query: 89 NHQKYANHNKY 57
N+ Y+N+N Y
Sbjct: 87 NNYNYSNYNNY 97
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 18.2 bits (35), Expect = 9.5
Identities = 5/11 (45%), Positives = 8/11 (72%)
Frame = -3
Query: 89 NHQKYANHNKY 57
N+ Y+N+N Y
Sbjct: 87 NNYNYSNYNNY 97
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 18.2 bits (35), Expect = 9.5
Identities = 5/11 (45%), Positives = 8/11 (72%)
Frame = -3
Query: 89 NHQKYANHNKY 57
N+ Y+N+N Y
Sbjct: 87 NNYNYSNYNNY 97
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 18.2 bits (35), Expect = 9.5
Identities = 5/11 (45%), Positives = 8/11 (72%)
Frame = -3
Query: 89 NHQKYANHNKY 57
N+ Y+N+N Y
Sbjct: 87 NNYNYSNYNNY 97
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 18.2 bits (35), Expect = 9.5
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +2
Query: 53 KNIYYDLHIF 82
+N+Y DLH F
Sbjct: 358 QNVYGDLHNF 367
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,338
Number of Sequences: 438
Number of extensions: 262
Number of successful extensions: 28
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 27
effective length of database: 134,517
effective search space used: 2555823
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
- SilkBase 1999-2023 -