Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_P07
(388 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical pr... 226 4e-60
Z46791-1|CAA86761.1| 476|Caenorhabditis elegans Hypothetical pr... 28 2.0
AL021474-2|CAA16309.3| 655|Caenorhabditis elegans Hypothetical ... 28 2.0
AF099919-10|AAC68792.1| 205|Caenorhabditis elegans Max-like pro... 28 2.0
Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical pr... 27 3.5
Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical pr... 27 3.5
AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protei... 27 3.5
Z70681-2|CAA94578.2| 203|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical pr... 26 8.1
Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical pr... 26 8.1
>Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical
protein F10B5.1 protein.
Length = 214
Score = 226 bits (553), Expect = 4e-60
Identities = 100/120 (83%), Positives = 107/120 (89%)
Frame = +3
Query: 27 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 206
MGRRPARCYRY KNKPYPKSRFCRGVPD KIRIFDLG KRA VD FP CVH++S+E E L
Sbjct: 1 MGRRPARCYRYIKNKPYPKSRFCRGVPDAKIRIFDLGNKRANVDTFPACVHMMSNEREHL 60
Query: 207 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 386
SSEALEA RIC NKY+VKNCGKD FH+R+R HPFHV RINKMLSCAGADRLQTGMRGA+G
Sbjct: 61 SSEALEAARICANKYMVKNCGKDGFHLRVRKHPFHVTRINKMLSCAGADRLQTGMRGAYG 120
>Z46791-1|CAA86761.1| 476|Caenorhabditis elegans Hypothetical
protein C09G5.2 protein.
Length = 476
Score = 28.3 bits (60), Expect = 2.0
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -1
Query: 388 FPNAPRIPVWSLSAPA 341
FPN+P +P+W LS P+
Sbjct: 233 FPNSPLLPIWLLSYPS 248
>AL021474-2|CAA16309.3| 655|Caenorhabditis elegans Hypothetical
protein Y32F6A.3 protein.
Length = 655
Score = 28.3 bits (60), Expect = 2.0
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
Frame = +1
Query: 214 RRWKQAVSVATSTS-----*RTAVKISSTSG*DYTPS 309
RRWK+ V +AT+TS R+ V+ +STS TP+
Sbjct: 504 RRWKKVVPIATNTSVSSSTPRSVVRTTSTSSVPTTPT 540
>AF099919-10|AAC68792.1| 205|Caenorhabditis elegans Max-like
protein 2 protein.
Length = 205
Score = 28.3 bits (60), Expect = 2.0
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 87 RFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGR 233
R C + K I D K+ A ++ + +++ EYEQ++S +AG+
Sbjct: 93 RACDFMSQLKTDISDADKQLAQLNAQAAALEMIASEYEQMASSVPDAGQ 141
>Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical
protein C09H6.2b protein.
Length = 954
Score = 27.5 bits (58), Expect = 3.5
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2
Query: 105 AHPDKTEI*DTVYSYNIDNISLVGAPLCSPQS 10
AH +K I D + NI+ ISLVG PL + Q+
Sbjct: 812 AHSNKLNIGDQII--NINGISLVGLPLSAAQT 841
>Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical
protein C09H6.2a protein.
Length = 982
Score = 27.5 bits (58), Expect = 3.5
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2
Query: 105 AHPDKTEI*DTVYSYNIDNISLVGAPLCSPQS 10
AH +K I D + NI+ ISLVG PL + Q+
Sbjct: 840 AHSNKLNIGDQII--NINGISLVGLPLSAAQT 869
>AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protein
protein.
Length = 954
Score = 27.5 bits (58), Expect = 3.5
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2
Query: 105 AHPDKTEI*DTVYSYNIDNISLVGAPLCSPQS 10
AH +K I D + NI+ ISLVG PL + Q+
Sbjct: 812 AHSNKLNIGDQII--NINGISLVGLPLSAAQT 841
>Z70681-2|CAA94578.2| 203|Caenorhabditis elegans Hypothetical
protein C30F2.2 protein.
Length = 203
Score = 26.6 bits (56), Expect = 6.1
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +3
Query: 6 RRFVENTMGRR--PARCYRYCKNKPYPKSRFCRGVPDPKIRIF 128
RR E +G PA CYR P P++ +GVP R+F
Sbjct: 153 RRLSERIVGSDHIPAVCYRTIYTLPPPENFAAQGVPSAFNRMF 195
>Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical
protein ZK1053.4 protein.
Length = 667
Score = 26.2 bits (55), Expect = 8.1
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = -2
Query: 234 YGLLPAPQNSA--ARTHQTLSARIVGSHPLSLSFCPSRKYGSLGQAHPDKTEI*DTVYSY 61
Y L P PQ S +H + S LS +CPSR + P TV++Y
Sbjct: 233 YSLYPPPQPSQQFVHSHNFHQPKFDASSMLSTGYCPSRNVATFKVDKPY-----GTVFTY 287
Query: 60 NIDN 49
+ N
Sbjct: 288 DHQN 291
>Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical
protein F33C8.3 protein.
Length = 282
Score = 26.2 bits (55), Expect = 8.1
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2
Query: 312 HGRGVVSSGCGTDLYRSSLRGTCCNRYGLLPAPQN 208
HG G GT R + +CCN +G L P N
Sbjct: 183 HGIGAFGGNKGTGYGR--VPSSCCNEHGKLSYPNN 215
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,798,991
Number of Sequences: 27780
Number of extensions: 201059
Number of successful extensions: 553
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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