Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_P06
         (502 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    24   0.88 
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    24   0.88 
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   2.0  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 23.8 bits (49), Expect = 0.88
 Identities = 12/54 (22%), Positives = 24/54 (44%)
 Frame = +2

Query: 179 GAVFYLGRLATRNPDVSWNKKTNPEPWEEYRTKQYKFYSPTRDYSKEESPAPKY 340
           G +  +  L   N  V ++ +      +    + + FY+P R+  + + PAP Y
Sbjct: 204 GLLLTMSVLPNVNSSVYYDPRALAPNLDFITLEAFDFYTPKRNPKEADYPAPLY 257


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.8 bits (49), Expect = 0.88
 Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 162 WALGVPVQSSTWEGWQHVT-QMFPGIRKPTLNL 257
           W L +   + + +G + +T +MF G+R PT +L
Sbjct: 612 WPLKLQNLTLSGKGLKKITGKMFQGVRSPTFHL 644


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 281 YKFYSPTRDYSKEESPAPKY 340
           + FY+P R+  + + P+P Y
Sbjct: 246 FDFYTPARNPKEADYPSPLY 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,180
Number of Sequences: 336
Number of extensions: 2702
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)